RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 MIFP14174 115 aa3.16□□□□□ -1.9
CAPN3-212ENST00000564503 COX7BP24311 80 aa3.16□□□□□ -1.9
CAPN3-212ENST00000564503 SPAG11BQ08648 103 aa3.16□□□□□ -1.9
CAPN3-212ENST00000564503 NREPQ16612 68 aa3.16□□□□□ -1.9
CAPN3-212ENST00000564503 C9orf116Q5BN46 136 aaPredicted RBP3.16□□□□□ -1.9
CAPN3-212ENST00000564503 LINC00269Q8N2A0 174 aa3.16□□□□□ -1.9
CAPN3-212ENST00000564503 WFDC10AQ9H1F0 79 aa3.16□□□□□ -1.9
CAPN3-212ENST00000564503 NF1P21359 2839 aa3.15□□□□□ -1.91
CAPN3-212ENST00000564503 NBPF19A0A087WUL8 3843 aa3.15□□□□□ -1.91
CAPN3-212ENST00000564503 GVQW2A0A096LPI5 108 aaPredicted RBP3.15□□□□□ -1.91
CAPN3-212ENST00000564503 DEFB130BP0DP73 79 aa3.15□□□□□ -1.91
CAPN3-212ENST00000564503 DEFB130AP0DP74 79 aa3.15□□□□□ -1.91
CAPN3-212ENST00000564503 FP248Q71RG6 208 aaPredicted RBP3.15□□□□□ -1.91
CAPN3-212ENST00000564503 Q8NDZ9 215 aa3.15□□□□□ -1.91
CAPN3-212ENST00000564503 LINC01006Q8NI28 216 aa3.15□□□□□ -1.91
CAPN3-212ENST00000564503 C16orf95Q9H693 158 aa3.15□□□□□ -1.91
CAPN3-212ENST00000564503 SPG11Q96JI7 2443 aa3.15□□□□□ -1.91
CAPN3-212ENST00000564503 CELSR1Q9NYQ6 3014 aa3.14□□□□□ -1.91
CAPN3-212ENST00000564503 IGLV10-54A0A075B6I4 117 aa3.14□□□□□ -1.91
CAPN3-212ENST00000564503 A0A096LPF7 62 aa3.14□□□□□ -1.91
CAPN3-212ENST00000564503 ELOF1P60002 83 aaKnown RBP3.14□□□□□ -1.91
CAPN3-212ENST00000564503 DEFB113Q30KQ7 82 aa3.14□□□□□ -1.91
CAPN3-212ENST00000564503 UNQ6190/PRO20217Q6UXQ8 127 aa3.14□□□□□ -1.91
CAPN3-212ENST00000564503 TMEM254Q8TBM7 123 aa3.14□□□□□ -1.91
CAPN3-212ENST00000564503 TM2D3Q9BRN9 247 aa3.14□□□□□ -1.91
CAPN3-212ENST00000564503 BPY2O14599 106 aa3.13□□□□□ -1.91
CAPN3-212ENST00000564503 ZNF73O43830 326 aaPredicted RBP3.13□□□□□ -1.91
CAPN3-212ENST00000564503 LELP1Q5T871 98 aa3.13□□□□□ -1.91
CAPN3-212ENST00000564503 C1orf195Q5TG92 126 aa3.13□□□□□ -1.91
CAPN3-212ENST00000564503 SCXQ7RTU7 201 aa3.13□□□□□ -1.91
CAPN3-212ENST00000564503 CRYBG3Q68DQ2 2970 aa3.12□□□□□ -1.91
CAPN3-212ENST00000564503 A0A0U1RQV1 116 aa3.12□□□□□ -1.91
CAPN3-212ENST00000564503 IGKV4-1P06312 121 aa3.12□□□□□ -1.91
CAPN3-212ENST00000564503 C11orf45Q8TAV5 145 aa3.12□□□□□ -1.91
CAPN3-212ENST00000564503 C6orf48Q9UBA6 75 aa3.12□□□□□ -1.91
CAPN3-212ENST00000564503 NBASA2RRP1 2371 aa3.12□□□□□ -1.91
CAPN3-212ENST00000564503 NOTCH3Q9UM47 2321 aa3.11□□□□□ -1.91
CAPN3-212ENST00000564503 LRRK2Q5S007 2527 aa3.11□□□□□ -1.91
CAPN3-212ENST00000564503 IGLV9-49A0A0B4J1Y8 123 aa3.11□□□□□ -1.91
CAPN3-212ENST00000564503 A0A1B0GW54 56 aa3.11□□□□□ -1.91
CAPN3-212ENST00000564503 M0R378 163 aa3.11□□□□□ -1.91
CAPN3-212ENST00000564503 FUSP35637 526 aaKnown RBP eCLIP3.11□□□□□ -1.91
CAPN3-212ENST00000564503 DAD1P61803 113 aa3.11□□□□□ -1.91
CAPN3-212ENST00000564503 WFDC11Q8NEX6 87 aa3.11□□□□□ -1.91
CAPN3-212ENST00000564503 OCR1Q9BZK8 76 aa3.11□□□□□ -1.91
CAPN3-212ENST00000564503 PRR34Q9NV39 138 aa3.11□□□□□ -1.91
CAPN3-212ENST00000564503 CELA1Q9UNI1 258 aa3.11□□□□□ -1.91
CAPN3-212ENST00000564503 ITPR2Q14571 2701 aa3.1□□□□□ -1.91
CAPN3-212ENST00000564503 IGLV5-52A0A0A0MRZ9 124 aa3.1□□□□□ -1.91
CAPN3-212ENST00000564503 EGFEM1PQ0D2K5 195 aa3.1□□□□□ -1.91
CAPN3-212ENST00000564503 ESRGQ1W209 222 aa3.1□□□□□ -1.91
CAPN3-212ENST00000564503 KRTAP24-1Q3LI83 254 aa3.1□□□□□ -1.91
CAPN3-212ENST00000564503 HIGD2BQ4VC39 106 aa3.1□□□□□ -1.91
CAPN3-212ENST00000564503 BRK1Q8WUW1 75 aa3.1□□□□□ -1.91
CAPN3-212ENST00000564503 LINC00474Q9P2X8 69 aa3.1□□□□□ -1.91
CAPN3-212ENST00000564503 KLK12Q9UKR0 248 aa3.1□□□□□ -1.91
CAPN3-212ENST00000564503 VPS13CQ709C8 3753 aa3.09□□□□□ -1.91
CAPN3-212ENST00000564503 APOC4P55056 127 aa3.09□□□□□ -1.91
CAPN3-212ENST00000564503 FAM229BQ4G0N7 80 aa3.09□□□□□ -1.91
CAPN3-212ENST00000564503 MRPL55Q7Z7F7 128 aaKnown RBP3.09□□□□□ -1.91
CAPN3-212ENST00000564503 CAMK2N2Q96S95 79 aa3.09□□□□□ -1.91
CAPN3-212ENST00000564503 XAGE1AQ9HD64 81 aa3.09□□□□□ -1.91
CAPN3-212ENST00000564503 LCE6AA0A183 80 aa3.08□□□□□ -1.92
CAPN3-212ENST00000564503 SPART-AS1P0CW21 52 aa3.08□□□□□ -1.92
CAPN3-212ENST00000564503 HIGD2AQ9BW72 106 aa3.08□□□□□ -1.92
CAPN3-212ENST00000564503 PKIGQ9Y2B9 76 aa3.08□□□□□ -1.92
CAPN3-212ENST00000564503 FLNCQ14315 2725 aa3.08□□□□□ -1.92
CAPN3-212ENST00000564503 UTP20O75691 2785 aaKnown RBP3.07□□□□□ -1.92
CAPN3-212ENST00000564503 IGLV5-48A0A075B6I7 105 aa3.07□□□□□ -1.92
CAPN3-212ENST00000564503 hDV103S1A0JD37 113 aa3.07□□□□□ -1.92
CAPN3-212ENST00000564503 DEFB135Q30KP9 77 aa3.07□□□□□ -1.92
CAPN3-212ENST00000564503 Q8N9L7 120 aa3.07□□□□□ -1.92
CAPN3-212ENST00000564503 NBEAL1Q6ZS30 2694 aa3.07□□□□□ -1.92
CAPN3-212ENST00000564503 F8P00451 2351 aa3.07□□□□□ -1.92
CAPN3-212ENST00000564503 SVEP1Q4LDE5 3571 aa3.06□□□□□ -1.92
CAPN3-212ENST00000564503 C3orf84H3BNL1 204 aa3.06□□□□□ -1.92
CAPN3-212ENST00000564503 USP9YO00507 2555 aaPredicted RBP3.06□□□□□ -1.92
CAPN3-212ENST00000564503 DEFB4AO15263 64 aa3.06□□□□□ -1.92
CAPN3-212ENST00000564503 HTN3P15516 51 aa3.06□□□□□ -1.92
CAPN3-212ENST00000564503 MAP1AP78559 2803 aaPredicted RBP3.06□□□□□ -1.92
CAPN3-212ENST00000564503 Q1T7F1 81 aa3.06□□□□□ -1.92
CAPN3-212ENST00000564503 KPRPQ5T749 579 aaPredicted RBP3.06□□□□□ -1.92
CAPN3-212ENST00000564503 Q6ZRU5 148 aa3.06□□□□□ -1.92
CAPN3-212ENST00000564503 NOTCH2NLQ7Z3S9 236 aa3.06□□□□□ -1.92
CAPN3-212ENST00000564503 SMIM29Q86T20 159 aa3.06□□□□□ -1.92
CAPN3-212ENST00000564503 NKAPP1Q8N9T2 125 aa3.06□□□□□ -1.92
CAPN3-212ENST00000564503 Q8NAQ8 132 aa3.06□□□□□ -1.92
CAPN3-212ENST00000564503 KCNQ1DNQ9H478 68 aa3.06□□□□□ -1.92
CAPN3-212ENST00000564503 DHRS4-AS1Q9P1J3 65 aa3.06□□□□□ -1.92
CAPN3-212ENST00000564503 MTORP42345 2549 aa3.05□□□□□ -1.92
CAPN3-212ENST00000564503 IGLV5-37A0A075B6J1 123 aa3.05□□□□□ -1.92
CAPN3-212ENST00000564503 ETDCA0A1B0GVM5 59 aa3.05□□□□□ -1.92
CAPN3-212ENST00000564503 KRTAP26-1Q6PEX3 210 aa3.05□□□□□ -1.92
CAPN3-212ENST00000564503 PRR15Q8IV56 129 aa3.05□□□□□ -1.92
CAPN3-212ENST00000564503 Q8N377 158 aa3.05□□□□□ -1.92
CAPN3-212ENST00000564503 C15orf56Q8N910 161 aa3.05□□□□□ -1.92
CAPN3-212ENST00000564503 Q8NBF4 154 aa3.05□□□□□ -1.92
CAPN3-212ENST00000564503 ZCCHC13Q8WW36 166 aaKnown RBP3.05□□□□□ -1.92
CAPN3-212ENST00000564503 SPRR4Q96PI1 79 aa3.05□□□□□ -1.92
CAPN3-212ENST00000564503 CYP4F30PQ9H0H9 118 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms