RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 EIF4EBP3O60516 100 aaPredicted RBP13.31□□□□□ -0.28
NME3-206ENST00000564252 SLC25A20O43772 301 aa13.3□□□□□ -0.28
NME3-206ENST00000564252 SEC61BP60468 96 aaKnown RBP13.29□□□□□ -0.28
NME3-206ENST00000564252 JOSD1Q15040 202 aaPredicted RBP13.29□□□□□ -0.28
NME3-206ENST00000564252 ADAMTSL4-AS1Q5T5F5 129 aa13.29□□□□□ -0.28
NME3-206ENST00000564252 ZNF73O43830 326 aaPredicted RBP13.28□□□□□ -0.28
NME3-206ENST00000564252 NPC2P61916 151 aa13.28□□□□□ -0.28
NME3-206ENST00000564252 A0A0J9YXY3 114 aa13.27□□□□□ -0.29
NME3-206ENST00000564252 C9orf153Q5TBE3 101 aa13.26□□□□□ -0.29
NME3-206ENST00000564252 ST20-AS1Q8NBB2 130 aa13.25□□□□□ -0.29
NME3-206ENST00000564252 E9PLD3 99 aa13.24□□□□□ -0.29
NME3-206ENST00000564252 KRTAP9-6A0A140TA67 174 aa13.23□□□□□ -0.29
NME3-206ENST00000564252 XP32Q5T750 250 aa13.23□□□□□ -0.29
NME3-206ENST00000564252 C5orf52A6NGY3 159 aa13.21□□□□□ -0.29
NME3-206ENST00000564252 LINC01547P58512 204 aaPredicted RBP13.21□□□□□ -0.29
NME3-206ENST00000564252 COLCA2A8K830 154 aa13.19□□□□□ -0.3
NME3-206ENST00000564252 LITAFQ99732 161 aa13.18□□□□□ -0.3
NME3-206ENST00000564252 CBY1Q9Y3M2 126 aa13.18□□□□□ -0.3
NME3-206ENST00000564252 SPANXCQ9NY87 97 aa13.17□□□□□ -0.3
NME3-206ENST00000564252 HINT1P49773 126 aaPredicted RBP13.16□□□□□ -0.3
NME3-206ENST00000564252 LINC00308Q8TCZ7 52 aa13.16□□□□□ -0.3
NME3-206ENST00000564252 SPRR1BP22528 89 aa13.15□□□□□ -0.3
NME3-206ENST00000564252 SYS1-DBNDD2H3BUS1 97 aa13.13□□□□□ -0.31
NME3-206ENST00000564252 OR13C6PQ8NH95 151 aa13.13□□□□□ -0.31
NME3-206ENST00000564252 TIMM17BO60830 172 aa13.12□□□□□ -0.31
NME3-206ENST00000564252 DHRS4-AS1Q9P1J3 65 aa13.11□□□□□ -0.31
NME3-206ENST00000564252 SLC25A34Q6PIV7 304 aa13.09□□□□□ -0.31
NME3-206ENST00000564252 SLC7A5P1Q8MH63 180 aa13.09□□□□□ -0.31
NME3-206ENST00000564252 SPANXDQ9BXN6 97 aa13.09□□□□□ -0.31
NME3-206ENST00000564252 LINC01545Q5VT33 79 aa13.08□□□□□ -0.32
NME3-206ENST00000564252 HRCT1Q6UXD1 115 aa13.08□□□□□ -0.32
NME3-206ENST00000564252 LIMD2Q9BT23 127 aa13.08□□□□□ -0.32
NME3-206ENST00000564252 ELOF1P60002 83 aaKnown RBP13.06□□□□□ -0.32
NME3-206ENST00000564252 LAMTOR3Q9UHA4 124 aa13.06□□□□□ -0.32
NME3-206ENST00000564252 ZNF815PA8K554 130 aa13.05□□□□□ -0.32
NME3-206ENST00000564252 LCE2CQ5TA81 110 aa13.05□□□□□ -0.32
NME3-206ENST00000564252 TTTY13Q9BZ97 58 aa13.05□□□□□ -0.32
NME3-206ENST00000564252 HIST1H2BKO60814 126 aa13.04□□□□□ -0.32
NME3-206ENST00000564252 HIST1H2BJP06899 126 aa13.04□□□□□ -0.32
NME3-206ENST00000564252 HIST1H2BOP23527 126 aa13.04□□□□□ -0.32
NME3-206ENST00000564252 COX7BP24311 80 aa13.04□□□□□ -0.32
NME3-206ENST00000564252 HIST1H2BBP33778 126 aa13.04□□□□□ -0.32
NME3-206ENST00000564252 HIST1H2BDP58876 126 aa13.04□□□□□ -0.32
NME3-206ENST00000564252 HIST1H2BCP62807 126 aa13.04□□□□□ -0.32
NME3-206ENST00000564252 HIST2H2BEQ16778 126 aa13.04□□□□□ -0.32
NME3-206ENST00000564252 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.04□□□□□ -0.32
NME3-206ENST00000564252 HIST1H2BHQ93079 126 aa13.04□□□□□ -0.32
NME3-206ENST00000564252 HIST1H2BNQ99877 126 aa13.04□□□□□ -0.32
NME3-206ENST00000564252 HIST1H2BMQ99879 126 aa13.04□□□□□ -0.32
NME3-206ENST00000564252 LCE2DQ5TA82 110 aaPredicted RBP13.03□□□□□ -0.32
NME3-206ENST00000564252 PET117Q6UWS5 81 aa13.03□□□□□ -0.32
NME3-206ENST00000564252 C6orf99Q4VX62 202 aa13.02□□□□□ -0.33
NME3-206ENST00000564252 LINC00518Q8N0U6 118 aa13.01□□□□□ -0.33
NME3-206ENST00000564252 KRTAP19-2Q3LHN2 52 aa13□□□□□ -0.33
NME3-206ENST00000564252 C9orf92A6NGG3 77 aa12.99□□□□□ -0.33
NME3-206ENST00000564252 CD164Q04900 197 aa12.98□□□□□ -0.33
NME3-206ENST00000564252 TAL2Q16559 108 aa12.98□□□□□ -0.33
NME3-206ENST00000564252 Q1RN00 199 aa12.98□□□□□ -0.33
NME3-206ENST00000564252 PCOTHQ58A44 107 aa12.98□□□□□ -0.33
NME3-206ENST00000564252 DEFB105AQ8NG35 78 aa12.97□□□□□ -0.33
NME3-206ENST00000564252 C3orf79P0CE67 100 aa12.96□□□□□ -0.33
NME3-206ENST00000564252 TEX49A0A1B0GTD5 131 aa12.95□□□□□ -0.34
NME3-206ENST00000564252 PRO1933Q9H354 126 aa12.95□□□□□ -0.34
NME3-206ENST00000564252 TRBV7-6A0A0J9YX20 115 aa12.94□□□□□ -0.34
NME3-206ENST00000564252 IGLV8-61A0A075B6I0 122 aa12.93□□□□□ -0.34
NME3-206ENST00000564252 SMIM29Q86T20 159 aa12.93□□□□□ -0.34
NME3-206ENST00000564252 A0A1B0GWB2 263 aa12.9□□□□□ -0.34
NME3-206ENST00000564252 H7C2G1 150 aa12.9□□□□□ -0.34
NME3-206ENST00000564252 Q5XG85 94 aa12.9□□□□□ -0.34
NME3-206ENST00000564252 SCGB1D4Q6XE38 83 aa12.9□□□□□ -0.34
NME3-206ENST00000564252 MT1HP80294 61 aa12.89□□□□□ -0.35
NME3-206ENST00000564252 IGLV5-48A0A075B6I7 105 aa12.88□□□□□ -0.35
NME3-206ENST00000564252 IFITM1P13164 125 aa12.87□□□□□ -0.35
NME3-206ENST00000564252 AKR1D1P51857 326 aa12.87□□□□□ -0.35
NME3-206ENST00000564252 KRTDAPP60985 99 aa12.87□□□□□ -0.35
NME3-206ENST00000564252 ANKRD39Q53RE8 183 aa12.86□□□□□ -0.35
NME3-206ENST00000564252 C1orf195Q5TG92 126 aa12.86□□□□□ -0.35
NME3-206ENST00000564252 COPS9Q8WXC6 57 aa12.86□□□□□ -0.35
NME3-206ENST00000564252 A0A0G2JQZ4 141 aa12.85□□□□□ -0.35
NME3-206ENST00000564252 A6NDN8 102 aa12.85□□□□□ -0.35
NME3-206ENST00000564252 COA6Q5JTJ3 125 aaKnown RBP12.85□□□□□ -0.35
NME3-206ENST00000564252 Q6ZVH6 145 aa12.83□□□□□ -0.36
NME3-206ENST00000564252 FSIP2Q5CZC0 6907 aa12.83□□□□□ -0.36
NME3-206ENST00000564252 MUSTN1Q8IVN3 82 aa12.82□□□□□ -0.36
NME3-206ENST00000564252 CRCT1Q9UGL9 99 aa12.8□□□□□ -0.36
NME3-206ENST00000564252 C20orf202A1L168 122 aa12.79□□□□□ -0.36
NME3-206ENST00000564252 A4D1N5 150 aa12.79□□□□□ -0.36
NME3-206ENST00000564252 PCP2Q8IVA1 136 aa12.79□□□□□ -0.36
NME3-206ENST00000564252 ATOH7Q8N100 152 aa12.79□□□□□ -0.36
NME3-206ENST00000564252 CFC1BP0CG36 223 aa12.77□□□□□ -0.37
NME3-206ENST00000564252 RPL37P61927 97 aaKnown RBP12.76□□□□□ -0.37
NME3-206ENST00000564252 SMIM11BQ8TCY0 68 aa12.76□□□□□ -0.37
NME3-206ENST00000564252 NHP2Q9NX24 153 aaKnown RBP12.76□□□□□ -0.37
NME3-206ENST00000564252 TRAV13-2A0A0B4J235 113 aa12.75□□□□□ -0.37
NME3-206ENST00000564252 FLGP20930 4061 aaPredicted RBP12.73□□□□□ -0.37
NME3-206ENST00000564252 LORP23490 312 aaPredicted RBP12.7□□□□□ -0.38
NME3-206ENST00000564252 TCL1BO95988 128 aa12.69□□□□□ -0.38
NME3-206ENST00000564252 KRTAP10-6P60371 365 aaPredicted RBP12.68□□□□□ -0.38
NME3-206ENST00000564252 F8WEM9 126 aa12.65□□□□□ -0.38
NME3-206ENST00000564252 SNRPEP62304 92 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms