RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 LEPROTL1O95214 131 aa11.51□□□□□ -0.57
HERC2-204ENST00000563945 ZNF73O43830 326 aaPredicted RBP11.5□□□□□ -0.57
HERC2-204ENST00000563945 LIMD2Q9BT23 127 aa11.5□□□□□ -0.57
HERC2-204ENST00000563945 C5orf52A6NGY3 159 aa11.49□□□□□ -0.57
HERC2-204ENST00000563945 ST20-AS1Q8NBB2 130 aa11.49□□□□□ -0.57
HERC2-204ENST00000563945 DPM2O94777 84 aa11.48□□□□□ -0.57
HERC2-204ENST00000563945 SLC25A34Q6PIV7 304 aa11.48□□□□□ -0.57
HERC2-204ENST00000563945 FSIP2Q5CZC0 6907 aa11.47□□□□□ -0.57
HERC2-204ENST00000563945 NPC2P61916 151 aa11.47□□□□□ -0.57
HERC2-204ENST00000563945 HRCT1Q6UXD1 115 aa11.46□□□□□ -0.57
HERC2-204ENST00000563945 IGLV8-61A0A075B6I0 122 aa11.45□□□□□ -0.58
HERC2-204ENST00000563945 PCOTHQ58A44 107 aa11.45□□□□□ -0.58
HERC2-204ENST00000563945 HSPB8Q9UJY1 196 aa11.45□□□□□ -0.58
HERC2-204ENST00000563945 IGKCP01834 107 aa11.43□□□□□ -0.58
HERC2-204ENST00000563945 LAMTOR3Q9UHA4 124 aa11.43□□□□□ -0.58
HERC2-204ENST00000563945 C9orf92A6NGG3 77 aa11.42□□□□□ -0.58
HERC2-204ENST00000563945 CFC1BP0CG36 223 aa11.42□□□□□ -0.58
HERC2-204ENST00000563945 FABP4P15090 132 aa11.42□□□□□ -0.58
HERC2-204ENST00000563945 LCE2CQ5TA81 110 aa11.42□□□□□ -0.58
HERC2-204ENST00000563945 OR13C6PQ8NH95 151 aa11.42□□□□□ -0.58
HERC2-204ENST00000563945 PMCHL2Q9BQD1 86 aa11.42□□□□□ -0.58
HERC2-204ENST00000563945 YPEL4Q96NS1 127 aa11.41□□□□□ -0.58
HERC2-204ENST00000563945 SOSTDC1Q6X4U4 206 aa11.4□□□□□ -0.58
HERC2-204ENST00000563945 DHRS4-AS1Q9P1J3 65 aa11.4□□□□□ -0.58
HERC2-204ENST00000563945 A0A0J9YXY3 114 aa11.39□□□□□ -0.59
HERC2-204ENST00000563945 SERF1AO75920 110 aa11.39□□□□□ -0.59
HERC2-204ENST00000563945 ADAMTSL4-AS1Q5T5F5 129 aa11.39□□□□□ -0.59
HERC2-204ENST00000563945 SPRR1BP22528 89 aa11.38□□□□□ -0.59
HERC2-204ENST00000563945 TRGC2P03986 189 aa11.37□□□□□ -0.59
HERC2-204ENST00000563945 EIF4EBP3O60516 100 aaPredicted RBP11.35□□□□□ -0.59
HERC2-204ENST00000563945 MT1HP80294 61 aa11.35□□□□□ -0.59
HERC2-204ENST00000563945 TAL2Q16559 108 aa11.35□□□□□ -0.59
HERC2-204ENST00000563945 SPANXCQ9NY87 97 aa11.35□□□□□ -0.59
HERC2-204ENST00000563945 PRO1933Q9H354 126 aa11.33□□□□□ -0.6
HERC2-204ENST00000563945 E9PLD3 99 aa11.32□□□□□ -0.6
HERC2-204ENST00000563945 KRTAP19-2Q3LHN2 52 aa11.32□□□□□ -0.6
HERC2-204ENST00000563945 DEFB105AQ8NG35 78 aa11.32□□□□□ -0.6
HERC2-204ENST00000563945 LINC00308Q8TCZ7 52 aa11.32□□□□□ -0.6
HERC2-204ENST00000563945 H7C2G1 150 aa11.31□□□□□ -0.6
HERC2-204ENST00000563945 COX7BP24311 80 aa11.31□□□□□ -0.6
HERC2-204ENST00000563945 CD164Q04900 197 aa11.31□□□□□ -0.6
HERC2-204ENST00000563945 LINC00310P59036 64 aa11.3□□□□□ -0.6
HERC2-204ENST00000563945 Q1RN00 199 aa11.3□□□□□ -0.6
HERC2-204ENST00000563945 SPANXDQ9BXN6 97 aa11.3□□□□□ -0.6
HERC2-204ENST00000563945 M0R2T5 61 aa11.29□□□□□ -0.6
HERC2-204ENST00000563945 LINC00518Q8N0U6 118 aa11.28□□□□□ -0.6
HERC2-204ENST00000563945 TEX49A0A1B0GTD5 131 aa11.26□□□□□ -0.61
HERC2-204ENST00000563945 TIMM17BO60830 172 aa11.26□□□□□ -0.61
HERC2-204ENST00000563945 AKR1D1P51857 326 aa11.26□□□□□ -0.61
HERC2-204ENST00000563945 ELOF1P60002 83 aaKnown RBP11.26□□□□□ -0.61
HERC2-204ENST00000563945 C6orf99Q4VX62 202 aa11.25□□□□□ -0.61
HERC2-204ENST00000563945 COX6B2Q6YFQ2 88 aa11.25□□□□□ -0.61
HERC2-204ENST00000563945 LITAFQ99732 161 aa11.22□□□□□ -0.61
HERC2-204ENST00000563945 ZNF815PA8K554 130 aa11.21□□□□□ -0.61
HERC2-204ENST00000563945 KRTAP10-6P60371 365 aaPredicted RBP11.21□□□□□ -0.61
HERC2-204ENST00000563945 Q5XG85 94 aa11.21□□□□□ -0.61
HERC2-204ENST00000563945 C1orf195Q5TG92 126 aa11.2□□□□□ -0.62
HERC2-204ENST00000563945 SYS1-DBNDD2H3BUS1 97 aa11.19□□□□□ -0.62
HERC2-204ENST00000563945 LORP23490 312 aaPredicted RBP11.19□□□□□ -0.62
HERC2-204ENST00000563945 TRBV7-6A0A0J9YX20 115 aa11.17□□□□□ -0.62
HERC2-204ENST00000563945 RPL37P61927 97 aaKnown RBP11.17□□□□□ -0.62
HERC2-204ENST00000563945 A0A1B0GWB2 263 aa11.15□□□□□ -0.62
HERC2-204ENST00000563945 COPS9Q8WXC6 57 aa11.15□□□□□ -0.62
HERC2-204ENST00000563945 A6NDN8 102 aa11.14□□□□□ -0.63
HERC2-204ENST00000563945 TCL1BO95988 128 aa11.14□□□□□ -0.63
HERC2-204ENST00000563945 SMIM29Q86T20 159 aa11.14□□□□□ -0.63
HERC2-204ENST00000563945 PET117Q6UWS5 81 aa11.12□□□□□ -0.63
HERC2-204ENST00000563945 SCGB1D4Q6XE38 83 aa11.12□□□□□ -0.63
HERC2-204ENST00000563945 A0A0G2JQZ4 141 aa11.11□□□□□ -0.63
HERC2-204ENST00000563945 LINC01545Q5VT33 79 aa11.11□□□□□ -0.63
HERC2-204ENST00000563945 TTTY13Q9BZ97 58 aa11.11□□□□□ -0.63
HERC2-204ENST00000563945 IGLV5-48A0A075B6I7 105 aa11.1□□□□□ -0.63
HERC2-204ENST00000563945 NHP2Q9NX24 153 aaKnown RBP11.1□□□□□ -0.63
HERC2-204ENST00000563945 A4D1N5 150 aa11.09□□□□□ -0.63
HERC2-204ENST00000563945 COLCA2A8K830 154 aa11.09□□□□□ -0.63
HERC2-204ENST00000563945 IFITM1P13164 125 aa11.07□□□□□ -0.64
HERC2-204ENST00000563945 F8WEM9 126 aa11.06□□□□□ -0.64
HERC2-204ENST00000563945 Q6Q795 121 aa11.03□□□□□ -0.64
HERC2-204ENST00000563945 Q6ZVH6 145 aa11.02□□□□□ -0.65
HERC2-204ENST00000563945 PCP2Q8IVA1 136 aa11.02□□□□□ -0.65
HERC2-204ENST00000563945 TRAV13-2A0A0B4J235 113 aa11.01□□□□□ -0.65
HERC2-204ENST00000563945 HIST1H2BKO60814 126 aa11□□□□□ -0.65
HERC2-204ENST00000563945 HIST1H2BJP06899 126 aa11□□□□□ -0.65
HERC2-204ENST00000563945 HIST1H2BOP23527 126 aa11□□□□□ -0.65
HERC2-204ENST00000563945 HIST1H2BBP33778 126 aa11□□□□□ -0.65
HERC2-204ENST00000563945 HIST1H2BDP58876 126 aa11□□□□□ -0.65
HERC2-204ENST00000563945 HIST1H2BCP62807 126 aa11□□□□□ -0.65
HERC2-204ENST00000563945 HIST2H2BEQ16778 126 aa11□□□□□ -0.65
HERC2-204ENST00000563945 HIST2H2BFQ5QNW6 126 aaPredicted RBP11□□□□□ -0.65
HERC2-204ENST00000563945 MUSTN1Q8IVN3 82 aa11□□□□□ -0.65
HERC2-204ENST00000563945 HIST1H2BHQ93079 126 aa11□□□□□ -0.65
HERC2-204ENST00000563945 HIST1H2BNQ99877 126 aa11□□□□□ -0.65
HERC2-204ENST00000563945 HIST1H2BMQ99879 126 aa11□□□□□ -0.65
HERC2-204ENST00000563945 C3orf79P0CE67 100 aa10.99□□□□□ -0.65
HERC2-204ENST00000563945 VAMP3Q15836 100 aa10.99□□□□□ -0.65
HERC2-204ENST00000563945 ATP11AUNQ6ZP68 121 aa10.99□□□□□ -0.65
HERC2-204ENST00000563945 KRTDAPP60985 99 aa10.98□□□□□ -0.65
HERC2-204ENST00000563945 C20orf202A1L168 122 aa10.97□□□□□ -0.65
HERC2-204ENST00000563945 SMIM11BQ8TCY0 68 aa10.97□□□□□ -0.65
HERC2-204ENST00000563945 SLC7A5P1Q8MH63 180 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms