RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 PKIGQ9Y2B9 76 aa3.29□□□□□ -1.88
HERPUD1-207ENST00000563781 MYMXA0A1B0GTQ4 84 aa3.28□□□□□ -1.88
HERPUD1-207ENST00000563781 NDUFC2-KCTD14E9PQ53 114 aa3.28□□□□□ -1.88
HERPUD1-207ENST00000563781 K7ERU9 68 aa3.28□□□□□ -1.88
HERPUD1-207ENST00000563781 NMUP48645 174 aa3.28□□□□□ -1.88
HERPUD1-207ENST00000563781 LINC01547P58512 204 aaPredicted RBP3.28□□□□□ -1.88
HERPUD1-207ENST00000563781 RPL18AQ02543 176 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-207ENST00000563781 SFTA2Q6UW10 78 aa3.28□□□□□ -1.88
HERPUD1-207ENST00000563781 MRPL55Q7Z7F7 128 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-207ENST00000563781 PCP2Q8IVA1 136 aa3.28□□□□□ -1.88
HERPUD1-207ENST00000563781 ERG28Q9UKR5 140 aa3.28□□□□□ -1.88
HERPUD1-207ENST00000563781 IGKV2-24A0A0C4DH68 120 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 A0A0J9YXY3 114 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 A0A1W2PNN7 141 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 ZNF815PA8K554 130 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 EPM2AB3EWF7 344 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 SMIM13P0DJ93 91 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 PFN2P35080 140 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 HAMPP81172 84 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 SPATA45Q537H7 98 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 C9orf129Q5T035 196 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 KRTAP7-1Q8IUC3 87 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 Q8NDZ9 215 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 CIRBP-AS1Q8TBR5 109 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 LITAFQ99732 161 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 VAMP8Q9BV40 100 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 TP73-AS1Q9UF72 201 aa3.27□□□□□ -1.89
HERPUD1-207ENST00000563781 FAT3Q8TDW7 4589 aa3.26□□□□□ -1.89
HERPUD1-207ENST00000563781 A0A087WYN8 130 aa3.26□□□□□ -1.89
HERPUD1-207ENST00000563781 TIMM17BO60830 172 aa3.26□□□□□ -1.89
HERPUD1-207ENST00000563781 COX8AP10176 69 aa3.26□□□□□ -1.89
HERPUD1-207ENST00000563781 DDTP30046 118 aa3.26□□□□□ -1.89
HERPUD1-207ENST00000563781 COX17Q14061 63 aa3.26□□□□□ -1.89
HERPUD1-207ENST00000563781 MEIG1Q5JSS6 88 aa3.26□□□□□ -1.89
HERPUD1-207ENST00000563781 SCXQ7RTU7 201 aa3.26□□□□□ -1.89
HERPUD1-207ENST00000563781 MIR7-3HGQ8N6C7 128 aa3.26□□□□□ -1.89
HERPUD1-207ENST00000563781 SND1-IT1Q9HBX3 110 aa3.26□□□□□ -1.89
HERPUD1-207ENST00000563781 XAGE1AQ9HD64 81 aa3.26□□□□□ -1.89
HERPUD1-207ENST00000563781 PLAC8Q9NZF1 115 aa3.26□□□□□ -1.89
HERPUD1-207ENST00000563781 A0A087X002 238 aa3.25□□□□□ -1.89
HERPUD1-207ENST00000563781 FAM168BA1KXE4 195 aa3.25□□□□□ -1.89
HERPUD1-207ENST00000563781 RPL37AP8A6NKH3 93 aa3.25□□□□□ -1.89
HERPUD1-207ENST00000563781 LINC00158P58513 81 aa3.25□□□□□ -1.89
HERPUD1-207ENST00000563781 SOSTDC1Q6X4U4 206 aa3.25□□□□□ -1.89
HERPUD1-207ENST00000563781 NOTCH2NLQ7Z3S9 236 aa3.25□□□□□ -1.89
HERPUD1-207ENST00000563781 DAND5Q8N907 189 aa3.25□□□□□ -1.89
HERPUD1-207ENST00000563781 LINC00474Q9P2X8 69 aa3.25□□□□□ -1.89
HERPUD1-207ENST00000563781 MYCBP2O75592 4640 aa3.24□□□□□ -1.89
HERPUD1-207ENST00000563781 LOC107984156A0A0G2JMH3 177 aa3.24□□□□□ -1.89
HERPUD1-207ENST00000563781 FAM236DA0A1B0GTK5 79 aa3.24□□□□□ -1.89
HERPUD1-207ENST00000563781 FAM236CP0DP71 79 aa3.24□□□□□ -1.89
HERPUD1-207ENST00000563781 PRR4Q16378 134 aa3.24□□□□□ -1.89
HERPUD1-207ENST00000563781 OCIAD2Q56VL3 154 aa3.24□□□□□ -1.89
HERPUD1-207ENST00000563781 C2orf91Q6ZV80 131 aa3.24□□□□□ -1.89
HERPUD1-207ENST00000563781 ARL17AQ8IVW1 177 aa3.24□□□□□ -1.89
HERPUD1-207ENST00000563781 SPANXDQ9BXN6 97 aa3.24□□□□□ -1.89
HERPUD1-207ENST00000563781 TMEM126AQ9H061 195 aa3.24□□□□□ -1.89
HERPUD1-207ENST00000563781 SPANXCQ9NY87 97 aa3.24□□□□□ -1.89
HERPUD1-207ENST00000563781 SRRM2Q9UQ35 2752 aaKnown RBP3.24□□□□□ -1.89
HERPUD1-207ENST00000563781 PMAIP1Q13794 54 aa3.23□□□□□ -1.89
HERPUD1-207ENST00000563781 SLC25A34Q6PIV7 304 aa3.23□□□□□ -1.89
HERPUD1-207ENST00000563781 SCGB1D4Q6XE38 83 aa3.23□□□□□ -1.89
HERPUD1-207ENST00000563781 PHF5AQ7RTV0 110 aaKnown RBP3.23□□□□□ -1.89
HERPUD1-207ENST00000563781 KRTAP11-1Q8IUC1 163 aa3.23□□□□□ -1.89
HERPUD1-207ENST00000563781 NKAPP1Q8N9T2 125 aa3.23□□□□□ -1.89
HERPUD1-207ENST00000563781 LINC00308Q8TCZ7 52 aa3.23□□□□□ -1.89
HERPUD1-207ENST00000563781 M0R143 59 aa3.22□□□□□ -1.89
HERPUD1-207ENST00000563781 NPC2P61916 151 aa3.22□□□□□ -1.89
HERPUD1-207ENST00000563781 Q8NBF4 154 aa3.22□□□□□ -1.89
HERPUD1-207ENST00000563781 DPH3Q96FX2 82 aa3.22□□□□□ -1.89
HERPUD1-207ENST00000563781 C22orf24Q9Y442 160 aa3.22□□□□□ -1.89
HERPUD1-207ENST00000563781 LRP1Q07954 4544 aaKnown RBP3.22□□□□□ -1.89
HERPUD1-207ENST00000563781 A0A0U1RQV1 116 aa3.21□□□□□ -1.9
HERPUD1-207ENST00000563781 J3KT08 172 aa3.21□□□□□ -1.9
HERPUD1-207ENST00000563781 SMR3BP02814 79 aaPredicted RBP3.21□□□□□ -1.9
HERPUD1-207ENST00000563781 IFITM1P13164 125 aa3.21□□□□□ -1.9
HERPUD1-207ENST00000563781 KRTAP10-4P60372 401 aaPredicted RBP3.21□□□□□ -1.9
HERPUD1-207ENST00000563781 PRR3P79522 188 aaKnown RBP3.21□□□□□ -1.9
HERPUD1-207ENST00000563781 REG3GQ6UW15 175 aa3.21□□□□□ -1.9
HERPUD1-207ENST00000563781 MUSTN1Q8IVN3 82 aa3.21□□□□□ -1.9
HERPUD1-207ENST00000563781 C7orf33Q8WU49 177 aa3.21□□□□□ -1.9
HERPUD1-207ENST00000563781 LINC00167Q96N53 147 aa3.21□□□□□ -1.9
HERPUD1-207ENST00000563781 PRO1933Q9H354 126 aa3.21□□□□□ -1.9
HERPUD1-207ENST00000563781 HIGD1BQ9P298 99 aa3.21□□□□□ -1.9
HERPUD1-207ENST00000563781 IGLV7-46A0A075B6I9 117 aa3.2□□□□□ -1.9
HERPUD1-207ENST00000563781 IGKV2-28A0A075B6P5 120 aa3.2□□□□□ -1.9
HERPUD1-207ENST00000563781 M0R378 163 aa3.2□□□□□ -1.9
HERPUD1-207ENST00000563781 NCR3O14931 201 aa3.2□□□□□ -1.9
HERPUD1-207ENST00000563781 NDUFC2O95298 119 aa3.2□□□□□ -1.9
HERPUD1-207ENST00000563781 IGKV2D-28P01615 120 aa3.2□□□□□ -1.9
HERPUD1-207ENST00000563781 MIEN1Q9BRT3 115 aa3.2□□□□□ -1.9
HERPUD1-207ENST00000563781 UQCR10Q9UDW1 63 aa3.2□□□□□ -1.9
HERPUD1-207ENST00000563781 TRBV10-2A0A0K0K1G8 114 aa3.19□□□□□ -1.9
HERPUD1-207ENST00000563781 PSORS1C2Q9UIG4 136 aa3.19□□□□□ -1.9
HERPUD1-207ENST00000563781 IGLV1-50A0A075B6I6 118 aa3.18□□□□□ -1.9
HERPUD1-207ENST00000563781 TRBV10-3A0A0K0K1G6 114 aa3.18□□□□□ -1.9
HERPUD1-207ENST00000563781 A0A1B0GX51 115 aa3.18□□□□□ -1.9
HERPUD1-207ENST00000563781 IGLV6-57P01721 117 aa3.18□□□□□ -1.9
HERPUD1-207ENST00000563781 FXYD2P54710 66 aa3.18□□□□□ -1.9
HERPUD1-207ENST00000563781 RPL37AP61513 92 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms