RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 J3QQQ9 107 aa8.81□□□□□ -1
CLK3-211ENST00000563297 RPS29P62273 56 aaKnown RBP8.81□□□□□ -1
CLK3-211ENST00000563297 Q6ZRX8 168 aa8.81□□□□□ -1
CLK3-211ENST00000563297 Q8N377 158 aa8.81□□□□□ -1
CLK3-211ENST00000563297 PLNP26678 52 aa8.8□□□□□ -1
CLK3-211ENST00000563297 KRTAP4-1Q9BYQ7 146 aa8.8□□□□□ -1
CLK3-211ENST00000563297 NDUFC2O95298 119 aa8.79□□□□□ -1
CLK3-211ENST00000563297 IGLV6-57P01721 117 aa8.79□□□□□ -1
CLK3-211ENST00000563297 FABP4P15090 132 aa8.79□□□□□ -1
CLK3-211ENST00000563297 SPANXB1Q9NS25 103 aaPredicted RBP8.79□□□□□ -1
CLK3-211ENST00000563297 DPM2O94777 84 aa8.78□□□□□ -1
CLK3-211ENST00000563297 PMCHL2Q9BQD1 86 aa8.78□□□□□ -1
CLK3-211ENST00000563297 MIEN1Q9BRT3 115 aa8.78□□□□□ -1
CLK3-211ENST00000563297 SLC25A20O43772 301 aa8.77□□□□□ -1.01
CLK3-211ENST00000563297 NMUP48645 174 aa8.77□□□□□ -1.01
CLK3-211ENST00000563297 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1.01
CLK3-211ENST00000563297 HERVK_113P61574 105 aa8.77□□□□□ -1.01
CLK3-211ENST00000563297 S100A7L2Q5SY68 101 aa8.77□□□□□ -1.01
CLK3-211ENST00000563297 LOC105371267A0A1B0GV96 52 aa8.76□□□□□ -1.01
CLK3-211ENST00000563297 EIF4EBP3O60516 100 aaPredicted RBP8.76□□□□□ -1.01
CLK3-211ENST00000563297 IGKCP01834 107 aa8.76□□□□□ -1.01
CLK3-211ENST00000563297 LGALS3P17931 250 aaKnown RBP8.76□□□□□ -1.01
CLK3-211ENST00000563297 AKR1D1P51857 326 aa8.76□□□□□ -1.01
CLK3-211ENST00000563297 SOSTDC1Q6X4U4 206 aa8.76□□□□□ -1.01
CLK3-211ENST00000563297 HIST1H2BLQ99880 126 aa8.76□□□□□ -1.01
CLK3-211ENST00000563297 HSPB8Q9UJY1 196 aa8.76□□□□□ -1.01
CLK3-211ENST00000563297 KRTAP9-6A0A140TA67 174 aa8.75□□□□□ -1.01
CLK3-211ENST00000563297 JOSD1Q15040 202 aaPredicted RBP8.75□□□□□ -1.01
CLK3-211ENST00000563297 ADAMTSL4-AS1Q5T5F5 129 aa8.75□□□□□ -1.01
CLK3-211ENST00000563297 TRAV23DV6A0A075B6W5 121 aa8.74□□□□□ -1.01
CLK3-211ENST00000563297 ZNF73O43830 326 aaPredicted RBP8.73□□□□□ -1.01
CLK3-211ENST00000563297 LINC01547P58512 204 aaPredicted RBP8.73□□□□□ -1.01
CLK3-211ENST00000563297 NPC2P61916 151 aa8.73□□□□□ -1.01
CLK3-211ENST00000563297 A0A0J9YXY3 114 aa8.72□□□□□ -1.01
CLK3-211ENST00000563297 KRTDAPP60985 99 aa8.72□□□□□ -1.01
CLK3-211ENST00000563297 ST20-AS1Q8NBB2 130 aa8.72□□□□□ -1.01
CLK3-211ENST00000563297 XP32Q5T750 250 aa8.71□□□□□ -1.02
CLK3-211ENST00000563297 C9orf153Q5TBE3 101 aa8.71□□□□□ -1.02
CLK3-211ENST00000563297 E9PLD3 99 aa8.69□□□□□ -1.02
CLK3-211ENST00000563297 SCGB1D1O95968 90 aa8.69□□□□□ -1.02
CLK3-211ENST00000563297 C3orf79P0CE67 100 aa8.68□□□□□ -1.02
CLK3-211ENST00000563297 HINT1P49773 126 aaPredicted RBP8.68□□□□□ -1.02
CLK3-211ENST00000563297 C20orf202A1L168 122 aa8.67□□□□□ -1.02
CLK3-211ENST00000563297 PET117Q6UWS5 81 aa8.67□□□□□ -1.02
CLK3-211ENST00000563297 CBY1Q9Y3M2 126 aa8.67□□□□□ -1.02
CLK3-211ENST00000563297 SYS1-DBNDD2H3BUS1 97 aa8.66□□□□□ -1.02
CLK3-211ENST00000563297 LINC00308Q8TCZ7 52 aa8.66□□□□□ -1.02
CLK3-211ENST00000563297 LITAFQ99732 161 aa8.66□□□□□ -1.02
CLK3-211ENST00000563297 SPRR1BP22528 89 aa8.65□□□□□ -1.02
CLK3-211ENST00000563297 SPANXCQ9NY87 97 aa8.65□□□□□ -1.02
CLK3-211ENST00000563297 OR13C6PQ8NH95 151 aa8.64□□□□□ -1.03
CLK3-211ENST00000563297 TIMM17BO60830 172 aa8.62□□□□□ -1.03
CLK3-211ENST00000563297 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
CLK3-211ENST00000563297 LCE2DQ5TA82 110 aaPredicted RBP8.62□□□□□ -1.03
CLK3-211ENST00000563297 HRCT1Q6UXD1 115 aa8.62□□□□□ -1.03
CLK3-211ENST00000563297 DHRS4-AS1Q9P1J3 65 aa8.62□□□□□ -1.03
CLK3-211ENST00000563297 SLC25A34Q6PIV7 304 aa8.61□□□□□ -1.03
CLK3-211ENST00000563297 LINC01545Q5VT33 79 aa8.6□□□□□ -1.03
CLK3-211ENST00000563297 LAMTOR3Q9UHA4 124 aa8.6□□□□□ -1.03
CLK3-211ENST00000563297 PYY3Q5JQD4 70 aa8.59□□□□□ -1.03
CLK3-211ENST00000563297 LIMD2Q9BT23 127 aa8.59□□□□□ -1.03
CLK3-211ENST00000563297 SPANXDQ9BXN6 97 aa8.59□□□□□ -1.03
CLK3-211ENST00000563297 SMIM6P0DI80 62 aa8.58□□□□□ -1.04
CLK3-211ENST00000563297 ELOF1P60002 83 aaKnown RBP8.58□□□□□ -1.04
CLK3-211ENST00000563297 TTTY13Q9BZ97 58 aa8.58□□□□□ -1.04
CLK3-211ENST00000563297 ZNF815PA8K554 130 aa8.57□□□□□ -1.04
CLK3-211ENST00000563297 HSBP1L1C9JCN9 74 aa8.57□□□□□ -1.04
CLK3-211ENST00000563297 COX7BP24311 80 aa8.57□□□□□ -1.04
CLK3-211ENST00000563297 KRTAP19-2Q3LHN2 52 aa8.57□□□□□ -1.04
CLK3-211ENST00000563297 C6orf99Q4VX62 202 aa8.57□□□□□ -1.04
CLK3-211ENST00000563297 LINC00518Q8N0U6 118 aa8.57□□□□□ -1.04
CLK3-211ENST00000563297 C9orf92A6NGG3 77 aa8.56□□□□□ -1.04
CLK3-211ENST00000563297 TAL2Q16559 108 aa8.56□□□□□ -1.04
CLK3-211ENST00000563297 PCOTHQ58A44 107 aa8.56□□□□□ -1.04
CLK3-211ENST00000563297 ATOH7Q8N100 152 aa8.56□□□□□ -1.04
CLK3-211ENST00000563297 Q1RN00 199 aa8.55□□□□□ -1.04
CLK3-211ENST00000563297 DEFB105AQ8NG35 78 aa8.55□□□□□ -1.04
CLK3-211ENST00000563297 C12orf57Q99622 126 aa8.55□□□□□ -1.04
CLK3-211ENST00000563297 CD164Q04900 197 aa8.54□□□□□ -1.04
CLK3-211ENST00000563297 VAMP8Q9BV40 100 aa8.54□□□□□ -1.04
CLK3-211ENST00000563297 IGLV8-61A0A075B6I0 122 aa8.53□□□□□ -1.04
CLK3-211ENST00000563297 TEX49A0A1B0GTD5 131 aa8.53□□□□□ -1.04
CLK3-211ENST00000563297 PRO1933Q9H354 126 aa8.53□□□□□ -1.04
CLK3-211ENST00000563297 SMIM29Q86T20 159 aa8.52□□□□□ -1.05
CLK3-211ENST00000563297 TRBV7-6A0A0J9YX20 115 aa8.51□□□□□ -1.05
CLK3-211ENST00000563297 MT1HP80294 61 aa8.5□□□□□ -1.05
CLK3-211ENST00000563297 SPATA45Q537H7 98 aa8.5□□□□□ -1.05
CLK3-211ENST00000563297 PAM16Q9Y3D7 125 aa8.5□□□□□ -1.05
CLK3-211ENST00000563297 H7C2G1 150 aa8.49□□□□□ -1.05
CLK3-211ENST00000563297 Q5XG85 94 aa8.49□□□□□ -1.05
CLK3-211ENST00000563297 IGLV5-48A0A075B6I7 105 aa8.47□□□□□ -1.05
CLK3-211ENST00000563297 A0A0G2JQZ4 141 aa8.47□□□□□ -1.05
CLK3-211ENST00000563297 A0A1B0GWB2 263 aa8.47□□□□□ -1.05
CLK3-211ENST00000563297 C1orf195Q5TG92 126 aa8.47□□□□□ -1.05
CLK3-211ENST00000563297 SCGB1D4Q6XE38 83 aa8.47□□□□□ -1.05
CLK3-211ENST00000563297 CRCT1Q9UGL9 99 aa8.47□□□□□ -1.05
CLK3-211ENST00000563297 IFITM1P13164 125 aa8.46□□□□□ -1.06
CLK3-211ENST00000563297 A6NDN8 102 aa8.45□□□□□ -1.06
CLK3-211ENST00000563297 ANKRD39Q53RE8 183 aa8.45□□□□□ -1.06
CLK3-211ENST00000563297 MUSTN1Q8IVN3 82 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms