RNA–Protein interactions for RNA: ENST00000562271.1

LINC01225-201, Transcript of LINC01225 pseudogene, humanhuman

Gene LINC01225, Length 2,270 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-201ENST00000562271 H7BZZ5 65 aa11.57□□□□□ -0.56
LINC01225-201ENST00000562271 TRAV23DV6A0A075B6W5 121 aa11.56□□□□□ -0.56
LINC01225-201ENST00000562271 GVQW2A0A096LPI5 108 aaPredicted RBP11.56□□□□□ -0.56
LINC01225-201ENST00000562271 IGLV6-57P01721 117 aa11.56□□□□□ -0.56
LINC01225-201ENST00000562271 DNAH10Q8IVF4 4471 aa11.56□□□□□ -0.56
LINC01225-201ENST00000562271 SMIM26A0A096LP01 95 aa11.56□□□□□ -0.56
LINC01225-201ENST00000562271 TRAV7A0A075B6U4 112 aa11.55□□□□□ -0.56
LINC01225-201ENST00000562271 KLKP1Q107X0 134 aa11.55□□□□□ -0.56
LINC01225-201ENST00000562271 TRAV10A0A0B4J240 114 aa11.54□□□□□ -0.56
LINC01225-201ENST00000562271 HYDINQ4G0P3 5121 aa11.54□□□□□ -0.56
LINC01225-201ENST00000562271 C1orf43Q9BWL3 253 aa11.53□□□□□ -0.56
LINC01225-201ENST00000562271 C6orf48Q9UBA6 75 aa11.53□□□□□ -0.56
LINC01225-201ENST00000562271 ESRGQ1W209 222 aa11.52□□□□□ -0.56
LINC01225-201ENST00000562271 ZNF561-AS1K7EIQ3 104 aa11.52□□□□□ -0.57
LINC01225-201ENST00000562271 FAM19A1Q7Z5A9 133 aa11.52□□□□□ -0.57
LINC01225-201ENST00000562271 RBM3P98179 157 aaKnown RBP11.51□□□□□ -0.57
LINC01225-201ENST00000562271 UBL5Q9BZL1 73 aa11.51□□□□□ -0.57
LINC01225-201ENST00000562271 XAGE1AQ9HD64 81 aa11.5□□□□□ -0.57
LINC01225-201ENST00000562271 LAMTOR3Q9UHA4 124 aa11.49□□□□□ -0.57
LINC01225-201ENST00000562271 WFDC10BQ8IUB3 73 aa11.49□□□□□ -0.57
LINC01225-201ENST00000562271 Q6ZQT0 140 aa11.48□□□□□ -0.57
LINC01225-201ENST00000562271 Q6ZQY7 126 aa11.48□□□□□ -0.57
LINC01225-201ENST00000562271 LOC110117498A0A087WWA1 95 aa11.47□□□□□ -0.57
LINC01225-201ENST00000562271 FP248Q71RG6 208 aaPredicted RBP11.47□□□□□ -0.57
LINC01225-201ENST00000562271 DIRC1Q969H9 104 aa11.47□□□□□ -0.57
LINC01225-201ENST00000562271 VPS13DQ5THJ4 4388 aa11.47□□□□□ -0.57
LINC01225-201ENST00000562271 H3BQ85 93 aa11.47□□□□□ -0.57
LINC01225-201ENST00000562271 H3BNG1 76 aa11.46□□□□□ -0.57
LINC01225-201ENST00000562271 NDUFC1O43677 76 aa11.46□□□□□ -0.57
LINC01225-201ENST00000562271 ATP5EP56381 51 aaPredicted RBP11.46□□□□□ -0.57
LINC01225-201ENST00000562271 CAMK2N2Q96S95 79 aa11.46□□□□□ -0.58
LINC01225-201ENST00000562271 HIGD2BQ4VC39 106 aa11.45□□□□□ -0.58
LINC01225-201ENST00000562271 LINC00588Q9Y4M8 146 aa11.45□□□□□ -0.58
LINC01225-201ENST00000562271 APLNQ9ULZ1 77 aa11.44□□□□□ -0.58
LINC01225-201ENST00000562271 ZNF73O43830 326 aaPredicted RBP11.44□□□□□ -0.58
LINC01225-201ENST00000562271 KMT2CQ8NEZ4 4911 aaKnown RBP11.42□□□□□ -0.58
LINC01225-201ENST00000562271 PDE6GP18545 87 aa11.42□□□□□ -0.58
LINC01225-201ENST00000562271 KRTAP26-1Q6PEX3 210 aa11.42□□□□□ -0.58
LINC01225-201ENST00000562271 PKIGQ9Y2B9 76 aa11.42□□□□□ -0.58
LINC01225-201ENST00000562271 COX7BP24311 80 aa11.41□□□□□ -0.58
LINC01225-201ENST00000562271 VPREB1P12018 145 aa11.4□□□□□ -0.58
LINC01225-201ENST00000562271 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.4□□□□□ -0.58
LINC01225-201ENST00000562271 ELOF1P60002 83 aaKnown RBP11.4□□□□□ -0.58
LINC01225-201ENST00000562271 TRBV7-6A0A0J9YX20 115 aa11.39□□□□□ -0.59
LINC01225-201ENST00000562271 Q6ZRU5 148 aa11.39□□□□□ -0.59
LINC01225-201ENST00000562271 M0R2N4 97 aa11.39□□□□□ -0.59
LINC01225-201ENST00000562271 F8WEM9 126 aa11.38□□□□□ -0.59
LINC01225-201ENST00000562271 C15orf56Q8N910 161 aa11.38□□□□□ -0.59
LINC01225-201ENST00000562271 WWC2-AS2Q96NR7 200 aa11.38□□□□□ -0.59
LINC01225-201ENST00000562271 DNAH2Q9P225 4427 aa11.38□□□□□ -0.59
LINC01225-201ENST00000562271 M0R378 163 aa11.38□□□□□ -0.59
LINC01225-201ENST00000562271 V9GYY9 64 aa11.37□□□□□ -0.59
LINC01225-201ENST00000562271 CASC10Q5T4H9 136 aa11.37□□□□□ -0.59
LINC01225-201ENST00000562271 SACSQ9NZJ4 4579 aa11.36□□□□□ -0.59
LINC01225-201ENST00000562271 RMI2Q96E14 147 aa11.36□□□□□ -0.59
LINC01225-201ENST00000562271 NUPR2A6NF83 97 aa11.35□□□□□ -0.59
LINC01225-201ENST00000562271 Q6ZVQ6 151 aa11.35□□□□□ -0.59
LINC01225-201ENST00000562271 KRTAP1-5Q9BYS1 174 aa11.35□□□□□ -0.59
LINC01225-201ENST00000562271 LINC01547P58512 204 aaPredicted RBP11.35□□□□□ -0.59
LINC01225-201ENST00000562271 CXCL6P80162 114 aa11.35□□□□□ -0.59
LINC01225-201ENST00000562271 C1orf195Q5TG92 126 aa11.35□□□□□ -0.59
LINC01225-201ENST00000562271 SNURFQ9Y675 71 aa11.34□□□□□ -0.59
LINC01225-201ENST00000562271 TRBV7-4A0A0J9YYF1 115 aa11.34□□□□□ -0.59
LINC01225-201ENST00000562271 SEC61GP60059 68 aa11.34□□□□□ -0.59
LINC01225-201ENST00000562271 HAMPP81172 84 aa11.34□□□□□ -0.59
LINC01225-201ENST00000562271 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
LINC01225-201ENST00000562271 BRK1Q8WUW1 75 aa11.32□□□□□ -0.6
LINC01225-201ENST00000562271 FRAS1Q86XX4 4008 aa11.31□□□□□ -0.6
LINC01225-201ENST00000562271 IGKV2D-24A0A075B6R9 120 aa11.31□□□□□ -0.6
LINC01225-201ENST00000562271 Q6ZRP5 223 aa11.31□□□□□ -0.6
LINC01225-201ENST00000562271 UBE2DNLQ8IWF7 75 aa11.31□□□□□ -0.6
LINC01225-201ENST00000562271 LINC00528Q8N1L1 170 aa11.31□□□□□ -0.6
LINC01225-201ENST00000562271 LINC00474Q9P2X8 69 aa11.31□□□□□ -0.6
LINC01225-201ENST00000562271 ERC2-IT1O76042 136 aa11.29□□□□□ -0.6
LINC01225-201ENST00000562271 SYCNQ0VAF6 134 aa11.28□□□□□ -0.6
LINC01225-201ENST00000562271 LY6G6CO95867 125 aa11.27□□□□□ -0.61
LINC01225-201ENST00000562271 ALMS1Q8TCU4 4167 aa11.24□□□□□ -0.61
LINC01225-201ENST00000562271 NKAPP1Q8N9T2 125 aa11.23□□□□□ -0.61
LINC01225-201ENST00000562271 A0A0U1RQV1 116 aa11.22□□□□□ -0.61
LINC01225-201ENST00000562271 DNAH10OSP0CZ25 163 aa11.22□□□□□ -0.61
LINC01225-201ENST00000562271 KCNQ1DNQ9H478 68 aa11.22□□□□□ -0.61
LINC01225-201ENST00000562271 TMEM254Q8TBM7 123 aa11.21□□□□□ -0.61
LINC01225-201ENST00000562271 RYR3Q15413 4870 aa11.21□□□□□ -0.61
LINC01225-201ENST00000562271 NREPQ16612 68 aa11.2□□□□□ -0.62
LINC01225-201ENST00000562271 SERTAD4-AS1Q5TG53 156 aa11.2□□□□□ -0.62
LINC01225-201ENST00000562271 RYR2Q92736 4967 aa11.2□□□□□ -0.62
LINC01225-201ENST00000562271 SCXQ7RTU7 201 aa11.19□□□□□ -0.62
LINC01225-201ENST00000562271 C7orf33Q8WU49 177 aa11.19□□□□□ -0.62
LINC01225-201ENST00000562271 LINC00476Q8WZB0 136 aa11.18□□□□□ -0.62
LINC01225-201ENST00000562271 TLX1NBP0CAT3 122 aa11.17□□□□□ -0.62
LINC01225-201ENST00000562271 FUSP35637 526 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC01225-201ENST00000562271 FAM229BQ4G0N7 80 aa11.16□□□□□ -0.62
LINC01225-201ENST00000562271 C3orf84H3BNL1 204 aa11.15□□□□□ -0.62
LINC01225-201ENST00000562271 BPY2O14599 106 aa11.15□□□□□ -0.62
LINC01225-201ENST00000562271 PLA2G2DQ9UNK4 145 aa11.15□□□□□ -0.62
LINC01225-201ENST00000562271 DEFB105AQ8NG35 78 aa11.14□□□□□ -0.63
LINC01225-201ENST00000562271 MPLKIPQ8TAP9 179 aa11.14□□□□□ -0.63
LINC01225-201ENST00000562271 NBDYA0A0U1RRE5 68 aa11.14□□□□□ -0.63
LINC01225-201ENST00000562271 PRYO14603 147 aa11.13□□□□□ -0.63
LINC01225-201ENST00000562271 PRR15Q8IV56 129 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms