RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 EPM2AB3EWF7 344 aa6.5□□□□□ -1.37
USP3-219ENST00000561326 COX7BP24311 80 aa6.5□□□□□ -1.37
USP3-219ENST00000561326 PLAC8Q9NZF1 115 aa6.5□□□□□ -1.37
USP3-219ENST00000561326 ETDCA0A1B0GVM5 59 aa6.49□□□□□ -1.37
USP3-219ENST00000561326 A0A1B0GX51 115 aa6.49□□□□□ -1.37
USP3-219ENST00000561326 H3BMG7 143 aa6.49□□□□□ -1.37
USP3-219ENST00000561326 PANO1I0J062 215 aa6.49□□□□□ -1.37
USP3-219ENST00000561326 LST1O00453 97 aa6.49□□□□□ -1.37
USP3-219ENST00000561326 DNAL4O96015 105 aa6.49□□□□□ -1.37
USP3-219ENST00000561326 TRACP01848 142 aa6.49□□□□□ -1.37
USP3-219ENST00000561326 REG3GQ6UW15 175 aa6.49□□□□□ -1.37
USP3-219ENST00000561326 PHF5AQ7RTV0 110 aaKnown RBP6.49□□□□□ -1.37
USP3-219ENST00000561326 PKD1P98161 4303 aa6.47□□□□□ -1.37
USP3-219ENST00000561326 hADV29S1A0JD25 119 aa6.47□□□□□ -1.37
USP3-219ENST00000561326 F8W1H4 67 aa6.47□□□□□ -1.37
USP3-219ENST00000561326 INAFM2P0DMQ5 153 aa6.47□□□□□ -1.37
USP3-219ENST00000561326 SPRR1AP35321 89 aa6.47□□□□□ -1.37
USP3-219ENST00000561326 ELOF1P60002 83 aaKnown RBP6.47□□□□□ -1.37
USP3-219ENST00000561326 LINC00575Q6W349 94 aa6.47□□□□□ -1.37
USP3-219ENST00000561326 C9JAW5 83 aa6.46□□□□□ -1.38
USP3-219ENST00000561326 GHRHP01286 108 aa6.46□□□□□ -1.38
USP3-219ENST00000561326 KRTAP10-1P60331 282 aa6.46□□□□□ -1.38
USP3-219ENST00000561326 DHRS4-AS1Q9P1J3 65 aa6.46□□□□□ -1.38
USP3-219ENST00000561326 A0A1B0GVY2 172 aa6.45□□□□□ -1.38
USP3-219ENST00000561326 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
USP3-219ENST00000561326 Q6ZSA8 131 aa6.45□□□□□ -1.38
USP3-219ENST00000561326 LINC00528Q8N1L1 170 aa6.45□□□□□ -1.38
USP3-219ENST00000561326 FAM218AQ96MZ4 157 aa6.45□□□□□ -1.38
USP3-219ENST00000561326 FAT2Q9NYQ8 4349 aa6.44□□□□□ -1.38
USP3-219ENST00000561326 DNAH11Q96DT5 4516 aa6.44□□□□□ -1.38
USP3-219ENST00000561326 B5MCH6 92 aa6.44□□□□□ -1.38
USP3-219ENST00000561326 H3BQ85 93 aa6.44□□□□□ -1.38
USP3-219ENST00000561326 Q6ZRX8 168 aa6.44□□□□□ -1.38
USP3-219ENST00000561326 KRTAP4-16G5E9R7 235 aaPredicted RBP6.43□□□□□ -1.38
USP3-219ENST00000561326 BAALC-AS2P0C853 105 aa6.43□□□□□ -1.38
USP3-219ENST00000561326 OCIAD2Q56VL3 154 aa6.43□□□□□ -1.38
USP3-219ENST00000561326 FAM19A1Q7Z5A9 133 aa6.43□□□□□ -1.38
USP3-219ENST00000561326 CIRBP-AS1Q8TBR5 109 aa6.43□□□□□ -1.38
USP3-219ENST00000561326 FAM30AQ9NZY2 134 aa6.43□□□□□ -1.38
USP3-219ENST00000561326 ORMDL1Q9P0S3 153 aa6.43□□□□□ -1.38
USP3-219ENST00000561326 H0Y9J4 135 aa6.42□□□□□ -1.38
USP3-219ENST00000561326 H3BT86 120 aa6.42□□□□□ -1.38
USP3-219ENST00000561326 BCE1O60756 84 aa6.42□□□□□ -1.38
USP3-219ENST00000561326 UBE2AP49459 152 aa6.42□□□□□ -1.38
USP3-219ENST00000561326 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.42□□□□□ -1.38
USP3-219ENST00000561326 SCXQ7RTU7 201 aa6.41□□□□□ -1.38
USP3-219ENST00000561326 ANKRD29Q8N6D5 301 aa6.41□□□□□ -1.38
USP3-219ENST00000561326 TMEM256-PLSCR3K7ERE1 68 aa6.4□□□□□ -1.38
USP3-219ENST00000561326 Q6ZQY7 126 aa6.39□□□□□ -1.39
USP3-219ENST00000561326 KRTAP11-1Q8IUC1 163 aa6.39□□□□□ -1.39
USP3-219ENST00000561326 MTURNQ8N3F0 131 aa6.39□□□□□ -1.39
USP3-219ENST00000561326 LINC01600Q96MT4 127 aa6.39□□□□□ -1.39
USP3-219ENST00000561326 PRO0461Q9UI25 63 aa6.39□□□□□ -1.39
USP3-219ENST00000561326 PSORS1C2Q9UIG4 136 aa6.39□□□□□ -1.39
USP3-219ENST00000561326 KMT2CQ8NEZ4 4911 aaKnown RBP6.39□□□□□ -1.39
USP3-219ENST00000561326 C1orf137Q5JT78 98 aa6.38□□□□□ -1.39
USP3-219ENST00000561326 Q9BRP9 147 aa6.38□□□□□ -1.39
USP3-219ENST00000561326 RYR2Q92736 4967 aa6.38□□□□□ -1.39
USP3-219ENST00000561326 RYR3Q15413 4870 aa6.37□□□□□ -1.39
USP3-219ENST00000561326 PRLHP81277 87 aa6.37□□□□□ -1.39
USP3-219ENST00000561326 SMCR5Q8TEV8 140 aa6.37□□□□□ -1.39
USP3-219ENST00000561326 PPDPFLQ8WWR9 84 aa6.37□□□□□ -1.39
USP3-219ENST00000561326 HIGD2AQ9BW72 106 aa6.37□□□□□ -1.39
USP3-219ENST00000561326 SMCPP49901 116 aaPredicted RBP6.36□□□□□ -1.39
USP3-219ENST00000561326 DNAH8Q96JB1 4490 aa6.36□□□□□ -1.39
USP3-219ENST00000561326 ETDBQ3ZM63 59 aa6.35□□□□□ -1.39
USP3-219ENST00000561326 TEN1Q86WV5 123 aa6.35□□□□□ -1.39
USP3-219ENST00000561326 DEFB105AQ8NG35 78 aa6.35□□□□□ -1.39
USP3-219ENST00000561326 DNAH5Q8TE73 4624 aa6.35□□□□□ -1.39
USP3-219ENST00000561326 ZNF861PO60384 105 aa6.34□□□□□ -1.39
USP3-219ENST00000561326 TEX49A0A1B0GTD5 131 aa6.33□□□□□ -1.4
USP3-219ENST00000561326 JMJD7-PLA2G4BH0Y9G9 81 aa6.33□□□□□ -1.4
USP3-219ENST00000561326 ERC2-IT1O76042 136 aa6.33□□□□□ -1.4
USP3-219ENST00000561326 IGLV7-43P04211 117 aa6.33□□□□□ -1.4
USP3-219ENST00000561326 HAMPP81172 84 aa6.33□□□□□ -1.4
USP3-219ENST00000561326 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
USP3-219ENST00000561326 LAMTOR3Q9UHA4 124 aa6.33□□□□□ -1.4
USP3-219ENST00000561326 PKHD1P08F94 4074 aa6.32□□□□□ -1.4
USP3-219ENST00000561326 IGLV5-48A0A075B6I7 105 aa6.32□□□□□ -1.4
USP3-219ENST00000561326 XGP55808 180 aa6.32□□□□□ -1.4
USP3-219ENST00000561326 ZNF706Q9Y5V0 76 aaPredicted RBP6.32□□□□□ -1.4
USP3-219ENST00000561326 NDUFV3P56181 108 aaKnown RBP6.31□□□□□ -1.4
USP3-219ENST00000561326 ST20-AS1Q8NBB2 130 aa6.31□□□□□ -1.4
USP3-219ENST00000561326 SRRM2Q9UQ35 2752 aaKnown RBP6.31□□□□□ -1.4
USP3-219ENST00000561326 J3QR89 54 aa6.3□□□□□ -1.4
USP3-219ENST00000561326 Q8N377 158 aa6.3□□□□□ -1.4
USP3-219ENST00000561326 RBM3P98179 157 aaKnown RBP6.29□□□□□ -1.4
USP3-219ENST00000561326 F8WEM9 126 aa6.28□□□□□ -1.4
USP3-219ENST00000561326 LINC01547P58512 204 aaPredicted RBP6.28□□□□□ -1.4
USP3-219ENST00000561326 RPL37AP61513 92 aaKnown RBP6.28□□□□□ -1.4
USP3-219ENST00000561326 GAGE2AQ6NT46 116 aa6.28□□□□□ -1.4
USP3-219ENST00000561326 OBSCN-AS1Q96MR7 158 aa6.28□□□□□ -1.4
USP3-219ENST00000561326 DSCR8Q96T75 97 aa6.28□□□□□ -1.4
USP3-219ENST00000561326 K7ERU9 68 aa6.27□□□□□ -1.41
USP3-219ENST00000561326 CDK2AP2O75956 126 aa6.27□□□□□ -1.41
USP3-219ENST00000561326 PDE6GP18545 87 aa6.27□□□□□ -1.41
USP3-219ENST00000561326 SPRR1BP22528 89 aa6.27□□□□□ -1.41
USP3-219ENST00000561326 C21orf62-AS1Q17RA5 79 aa6.27□□□□□ -1.41
USP3-219ENST00000561326 SMR3BP02814 79 aaPredicted RBP6.26□□□□□ -1.41
USP3-219ENST00000561326 SPRR4Q96PI1 79 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms