RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 SOSTDC1Q6X4U4 206 aa15.12■□□□□ 0.01
SNRPA1-215ENST00000561187 IGLV6-57P01721 117 aa15.11■□□□□ 0.01
SNRPA1-215ENST00000561187 NMUP48645 174 aa15.11■□□□□ 0.01
SNRPA1-215ENST00000561187 SSBP3-AS1Q7Z2R9 100 aa15.11■□□□□ 0.01
SNRPA1-215ENST00000561187 ST20-AS1Q8NBB2 130 aa15.09■□□□□ 0.01
SNRPA1-215ENST00000561187 NDUFC2O95298 119 aa15.07■□□□□ 0
SNRPA1-215ENST00000561187 ADAMTSL4-AS1Q5T5F5 129 aa15.07■□□□□ 0
SNRPA1-215ENST00000561187 ZNF73O43830 326 aaPredicted RBP15.06■□□□□ 0
SNRPA1-215ENST00000561187 SEC61BP60468 96 aaKnown RBP15.06■□□□□ 0
SNRPA1-215ENST00000561187 RPS29P62273 56 aaKnown RBP15.06■□□□□ 0
SNRPA1-215ENST00000561187 A0A0J9YXY3 114 aa15.05■□□□□ -0
SNRPA1-215ENST00000561187 SLC25A20O43772 301 aa15.05■□□□□ -0
SNRPA1-215ENST00000561187 JOSD1Q15040 202 aaPredicted RBP15.05■□□□□ -0
SNRPA1-215ENST00000561187 KRTAP9-6A0A140TA67 174 aa15.01□□□□□ -0.01
SNRPA1-215ENST00000561187 LINC01547P58512 204 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-215ENST00000561187 E9PLD3 99 aa14.98□□□□□ -0.01
SNRPA1-215ENST00000561187 XP32Q5T750 250 aa14.97□□□□□ -0.01
SNRPA1-215ENST00000561187 HRCT1Q6UXD1 115 aa14.97□□□□□ -0.01
SNRPA1-215ENST00000561187 OR13C6PQ8NH95 151 aa14.97□□□□□ -0.01
SNRPA1-215ENST00000561187 HINT1P49773 126 aaPredicted RBP14.93□□□□□ -0.02
SNRPA1-215ENST00000561187 COLCA2A8K830 154 aa14.92□□□□□ -0.02
SNRPA1-215ENST00000561187 LINC00308Q8TCZ7 52 aa14.92□□□□□ -0.02
SNRPA1-215ENST00000561187 LITAFQ99732 161 aa14.92□□□□□ -0.02
SNRPA1-215ENST00000561187 SLC7A5P1Q8MH63 180 aa14.91□□□□□ -0.02
SNRPA1-215ENST00000561187 SPANXCQ9NY87 97 aa14.91□□□□□ -0.02
SNRPA1-215ENST00000561187 SYS1-DBNDD2H3BUS1 97 aa14.88□□□□□ -0.03
SNRPA1-215ENST00000561187 TTTY13Q9BZ97 58 aa14.88□□□□□ -0.03
SNRPA1-215ENST00000561187 CBY1Q9Y3M2 126 aa14.86□□□□□ -0.03
SNRPA1-215ENST00000561187 C9orf92A6NGG3 77 aa14.85□□□□□ -0.03
SNRPA1-215ENST00000561187 ZNF815PA8K554 130 aa14.85□□□□□ -0.03
SNRPA1-215ENST00000561187 LIMD2Q9BT23 127 aa14.83□□□□□ -0.04
SNRPA1-215ENST00000561187 DHRS4-AS1Q9P1J3 65 aa14.83□□□□□ -0.04
SNRPA1-215ENST00000561187 C5orf52A6NGY3 159 aa14.82□□□□□ -0.04
SNRPA1-215ENST00000561187 SPRR1BP22528 89 aa14.82□□□□□ -0.04
SNRPA1-215ENST00000561187 Q1RN00 199 aa14.82□□□□□ -0.04
SNRPA1-215ENST00000561187 SPANXDQ9BXN6 97 aa14.82□□□□□ -0.04
SNRPA1-215ENST00000561187 TIMM17BO60830 172 aa14.81□□□□□ -0.04
SNRPA1-215ENST00000561187 COX7BP24311 80 aa14.81□□□□□ -0.04
SNRPA1-215ENST00000561187 C6orf99Q4VX62 202 aa14.81□□□□□ -0.04
SNRPA1-215ENST00000561187 SLC25A34Q6PIV7 304 aa14.81□□□□□ -0.04
SNRPA1-215ENST00000561187 DEFB105AQ8NG35 78 aa14.81□□□□□ -0.04
SNRPA1-215ENST00000561187 LAMTOR3Q9UHA4 124 aa14.81□□□□□ -0.04
SNRPA1-215ENST00000561187 LINC01545Q5VT33 79 aa14.8□□□□□ -0.04
SNRPA1-215ENST00000561187 HIST1H2BKO60814 126 aa14.79□□□□□ -0.04
SNRPA1-215ENST00000561187 HIST1H2BJP06899 126 aa14.79□□□□□ -0.04
SNRPA1-215ENST00000561187 HIST1H2BOP23527 126 aa14.79□□□□□ -0.04
SNRPA1-215ENST00000561187 HIST1H2BBP33778 126 aa14.79□□□□□ -0.04
SNRPA1-215ENST00000561187 HIST1H2BDP58876 126 aa14.79□□□□□ -0.04
SNRPA1-215ENST00000561187 HIST1H2BCP62807 126 aa14.79□□□□□ -0.04
SNRPA1-215ENST00000561187 HIST2H2BEQ16778 126 aa14.79□□□□□ -0.04
SNRPA1-215ENST00000561187 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.79□□□□□ -0.04
SNRPA1-215ENST00000561187 HIST1H2BHQ93079 126 aa14.79□□□□□ -0.04
SNRPA1-215ENST00000561187 HIST1H2BNQ99877 126 aa14.79□□□□□ -0.04
SNRPA1-215ENST00000561187 HIST1H2BMQ99879 126 aa14.79□□□□□ -0.04
SNRPA1-215ENST00000561187 ELOF1P60002 83 aaKnown RBP14.78□□□□□ -0.04
SNRPA1-215ENST00000561187 PCOTHQ58A44 107 aa14.78□□□□□ -0.04
SNRPA1-215ENST00000561187 H7C2G1 150 aa14.77□□□□□ -0.05
SNRPA1-215ENST00000561187 TAL2Q16559 108 aa14.76□□□□□ -0.05
SNRPA1-215ENST00000561187 LCE2CQ5TA81 110 aa14.74□□□□□ -0.05
SNRPA1-215ENST00000561187 PET117Q6UWS5 81 aa14.74□□□□□ -0.05
SNRPA1-215ENST00000561187 IGLV8-61A0A075B6I0 122 aa14.72□□□□□ -0.05
SNRPA1-215ENST00000561187 C3orf79P0CE67 100 aa14.7□□□□□ -0.06
SNRPA1-215ENST00000561187 LINC00518Q8N0U6 118 aa14.7□□□□□ -0.06
SNRPA1-215ENST00000561187 A0A0G2JQZ4 141 aa14.69□□□□□ -0.06
SNRPA1-215ENST00000561187 SCGB1D4Q6XE38 83 aa14.69□□□□□ -0.06
SNRPA1-215ENST00000561187 KRTDAPP60985 99 aa14.68□□□□□ -0.06
SNRPA1-215ENST00000561187 KRTAP19-2Q3LHN2 52 aa14.67□□□□□ -0.06
SNRPA1-215ENST00000561187 PRO1933Q9H354 126 aa14.67□□□□□ -0.06
SNRPA1-215ENST00000561187 TEX49A0A1B0GTD5 131 aa14.66□□□□□ -0.06
SNRPA1-215ENST00000561187 FSIP2Q5CZC0 6907 aa14.64□□□□□ -0.07
SNRPA1-215ENST00000561187 A6NDN8 102 aa14.63□□□□□ -0.07
SNRPA1-215ENST00000561187 ANKRD39Q53RE8 183 aa14.63□□□□□ -0.07
SNRPA1-215ENST00000561187 CD164Q04900 197 aa14.62□□□□□ -0.07
SNRPA1-215ENST00000561187 SMIM29Q86T20 159 aa14.62□□□□□ -0.07
SNRPA1-215ENST00000561187 MT1HP80294 61 aa14.61□□□□□ -0.07
SNRPA1-215ENST00000561187 ATOH7Q8N100 152 aa14.61□□□□□ -0.07
SNRPA1-215ENST00000561187 A0A1B0GWB2 263 aa14.59□□□□□ -0.07
SNRPA1-215ENST00000561187 AKR1D1P51857 326 aa14.58□□□□□ -0.08
SNRPA1-215ENST00000561187 TRBV7-6A0A0J9YX20 115 aa14.57□□□□□ -0.08
SNRPA1-215ENST00000561187 C1orf195Q5TG92 126 aa14.56□□□□□ -0.08
SNRPA1-215ENST00000561187 MUSTN1Q8IVN3 82 aa14.56□□□□□ -0.08
SNRPA1-215ENST00000561187 IGLV5-48A0A075B6I7 105 aa14.54□□□□□ -0.08
SNRPA1-215ENST00000561187 PCP2Q8IVA1 136 aa14.54□□□□□ -0.08
SNRPA1-215ENST00000561187 C20orf202A1L168 122 aa14.53□□□□□ -0.08
SNRPA1-215ENST00000561187 IFITM1P13164 125 aa14.53□□□□□ -0.08
SNRPA1-215ENST00000561187 COPS9Q8WXC6 57 aa14.53□□□□□ -0.08
SNRPA1-215ENST00000561187 CRCT1Q9UGL9 99 aa14.51□□□□□ -0.09
SNRPA1-215ENST00000561187 Q5XG85 94 aa14.49□□□□□ -0.09
SNRPA1-215ENST00000561187 SMIM11BQ8TCY0 68 aa14.49□□□□□ -0.09
SNRPA1-215ENST00000561187 COA6Q5JTJ3 125 aaKnown RBP14.47□□□□□ -0.09
SNRPA1-215ENST00000561187 RPL37P61927 97 aaKnown RBP14.45□□□□□ -0.1
SNRPA1-215ENST00000561187 Q6ZVH6 145 aa14.45□□□□□ -0.1
SNRPA1-215ENST00000561187 TRAV13-2A0A0B4J235 113 aa14.43□□□□□ -0.1
SNRPA1-215ENST00000561187 A4D1N5 150 aa14.43□□□□□ -0.1
SNRPA1-215ENST00000561187 CFC1BP0CG36 223 aa14.43□□□□□ -0.1
SNRPA1-215ENST00000561187 NHP2Q9NX24 153 aaKnown RBP14.43□□□□□ -0.1
SNRPA1-215ENST00000561187 F8WEM9 126 aa14.4□□□□□ -0.1
SNRPA1-215ENST00000561187 TCL1BO95988 128 aa14.38□□□□□ -0.11
SNRPA1-215ENST00000561187 COX6B2Q6YFQ2 88 aa14.38□□□□□ -0.11
SNRPA1-215ENST00000561187 M0R2T5 61 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms