RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TRAV23DV6A0A075B6W5 121 aa9.1□□□□□ -0.95
SNX1-213ENST00000561026 A0A0J9YXY3 114 aa9.1□□□□□ -0.95
SNX1-213ENST00000561026 COLCA2A8K830 154 aa9.1□□□□□ -0.95
SNX1-213ENST00000561026 JOSD1Q15040 202 aaPredicted RBP9.1□□□□□ -0.95
SNX1-213ENST00000561026 Q8N377 158 aa9.1□□□□□ -0.95
SNX1-213ENST00000561026 ZNF73O43830 326 aaPredicted RBP9.09□□□□□ -0.95
SNX1-213ENST00000561026 NPC2P61916 151 aa9.09□□□□□ -0.95
SNX1-213ENST00000561026 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
SNX1-213ENST00000561026 E9PLD3 99 aa9.08□□□□□ -0.96
SNX1-213ENST00000561026 SLC25A20O43772 301 aa9.07□□□□□ -0.96
SNX1-213ENST00000561026 SLC7A5P1Q8MH63 180 aa9.05□□□□□ -0.96
SNX1-213ENST00000561026 ST20-AS1Q8NBB2 130 aa9.05□□□□□ -0.96
SNX1-213ENST00000561026 SEC61BP60468 96 aaKnown RBP9.04□□□□□ -0.96
SNX1-213ENST00000561026 C9orf153Q5TBE3 101 aa9.04□□□□□ -0.96
SNX1-213ENST00000561026 CBY1Q9Y3M2 126 aa9.04□□□□□ -0.96
SNX1-213ENST00000561026 C5orf52A6NGY3 159 aa9.03□□□□□ -0.96
SNX1-213ENST00000561026 HINT1P49773 126 aaPredicted RBP9.03□□□□□ -0.96
SNX1-213ENST00000561026 LITAFQ99732 161 aa9.03□□□□□ -0.96
SNX1-213ENST00000561026 SYS1-DBNDD2H3BUS1 97 aa9.02□□□□□ -0.97
SNX1-213ENST00000561026 LINC00308Q8TCZ7 52 aa9.02□□□□□ -0.97
SNX1-213ENST00000561026 KRTAP4-1Q9BYQ7 146 aa9.01□□□□□ -0.97
SNX1-213ENST00000561026 SPANXCQ9NY87 97 aa9.01□□□□□ -0.97
SNX1-213ENST00000561026 TIMM17BO60830 172 aa9□□□□□ -0.97
SNX1-213ENST00000561026 OR13C6PQ8NH95 151 aa8.99□□□□□ -0.97
SNX1-213ENST00000561026 XP32Q5T750 250 aa8.99□□□□□ -0.97
SNX1-213ENST00000561026 LINC01545Q5VT33 79 aa8.99□□□□□ -0.97
SNX1-213ENST00000561026 HIST1H2BKO60814 126 aa8.98□□□□□ -0.97
SNX1-213ENST00000561026 HIST1H2BJP06899 126 aa8.98□□□□□ -0.97
SNX1-213ENST00000561026 SPRR1BP22528 89 aa8.98□□□□□ -0.97
SNX1-213ENST00000561026 HIST1H2BOP23527 126 aa8.98□□□□□ -0.97
SNX1-213ENST00000561026 HIST1H2BBP33778 126 aa8.98□□□□□ -0.97
SNX1-213ENST00000561026 HIST1H2BDP58876 126 aa8.98□□□□□ -0.97
SNX1-213ENST00000561026 HIST1H2BCP62807 126 aa8.98□□□□□ -0.97
SNX1-213ENST00000561026 HIST2H2BEQ16778 126 aa8.98□□□□□ -0.97
SNX1-213ENST00000561026 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.98□□□□□ -0.97
SNX1-213ENST00000561026 HIST1H2BHQ93079 126 aa8.98□□□□□ -0.97
SNX1-213ENST00000561026 HIST1H2BNQ99877 126 aa8.98□□□□□ -0.97
SNX1-213ENST00000561026 HIST1H2BMQ99879 126 aa8.98□□□□□ -0.97
SNX1-213ENST00000561026 DHRS4-AS1Q9P1J3 65 aa8.98□□□□□ -0.97
SNX1-213ENST00000561026 PET117Q6UWS5 81 aa8.97□□□□□ -0.97
SNX1-213ENST00000561026 SPANXDQ9BXN6 97 aa8.97□□□□□ -0.97
SNX1-213ENST00000561026 ZNF815PA8K554 130 aa8.96□□□□□ -0.98
SNX1-213ENST00000561026 SLC25A34Q6PIV7 304 aa8.96□□□□□ -0.98
SNX1-213ENST00000561026 LINC01547P58512 204 aaPredicted RBP8.95□□□□□ -0.98
SNX1-213ENST00000561026 LINC00518Q8N0U6 118 aa8.94□□□□□ -0.98
SNX1-213ENST00000561026 TTTY13Q9BZ97 58 aa8.94□□□□□ -0.98
SNX1-213ENST00000561026 ELOF1P60002 83 aaKnown RBP8.93□□□□□ -0.98
SNX1-213ENST00000561026 LAMTOR3Q9UHA4 124 aa8.93□□□□□ -0.98
SNX1-213ENST00000561026 COX7BP24311 80 aa8.92□□□□□ -0.98
SNX1-213ENST00000561026 C6orf99Q4VX62 202 aa8.92□□□□□ -0.98
SNX1-213ENST00000561026 LIMD2Q9BT23 127 aa8.92□□□□□ -0.98
SNX1-213ENST00000561026 HRCT1Q6UXD1 115 aa8.91□□□□□ -0.98
SNX1-213ENST00000561026 C3orf79P0CE67 100 aa8.9□□□□□ -0.98
SNX1-213ENST00000561026 TAL2Q16559 108 aa8.88□□□□□ -0.99
SNX1-213ENST00000561026 KRTAP9-6A0A140TA67 174 aa8.87□□□□□ -0.99
SNX1-213ENST00000561026 DEFB105AQ8NG35 78 aa8.87□□□□□ -0.99
SNX1-213ENST00000561026 TRBV7-6A0A0J9YX20 115 aa8.86□□□□□ -0.99
SNX1-213ENST00000561026 KRTDAPP60985 99 aa8.86□□□□□ -0.99
SNX1-213ENST00000561026 Q1RN00 199 aa8.86□□□□□ -0.99
SNX1-213ENST00000561026 SCGB1D4Q6XE38 83 aa8.86□□□□□ -0.99
SNX1-213ENST00000561026 TEX49A0A1B0GTD5 131 aa8.86□□□□□ -0.99
SNX1-213ENST00000561026 CD164Q04900 197 aa8.86□□□□□ -0.99
SNX1-213ENST00000561026 COA6Q5JTJ3 125 aaKnown RBP8.86□□□□□ -0.99
SNX1-213ENST00000561026 PRO1933Q9H354 126 aa8.86□□□□□ -0.99
SNX1-213ENST00000561026 COPS9Q8WXC6 57 aa8.85□□□□□ -0.99
SNX1-213ENST00000561026 A0A1B0GWB2 263 aa8.83□□□□□ -1
SNX1-213ENST00000561026 C9orf92A6NGG3 77 aa8.83□□□□□ -1
SNX1-213ENST00000561026 IFITM1P13164 125 aa8.83□□□□□ -1
SNX1-213ENST00000561026 ANKRD39Q53RE8 183 aa8.83□□□□□ -1
SNX1-213ENST00000561026 LCE2CQ5TA81 110 aa8.83□□□□□ -1
SNX1-213ENST00000561026 SMIM29Q86T20 159 aa8.83□□□□□ -1
SNX1-213ENST00000561026 A6NDN8 102 aa8.82□□□□□ -1
SNX1-213ENST00000561026 PCOTHQ58A44 107 aa8.82□□□□□ -1
SNX1-213ENST00000561026 Q6ZVH6 145 aa8.82□□□□□ -1
SNX1-213ENST00000561026 IGLV5-48A0A075B6I7 105 aa8.81□□□□□ -1
SNX1-213ENST00000561026 C20orf202A1L168 122 aa8.81□□□□□ -1
SNX1-213ENST00000561026 H7C2G1 150 aa8.81□□□□□ -1
SNX1-213ENST00000561026 AKR1D1P51857 326 aa8.81□□□□□ -1
SNX1-213ENST00000561026 Q5XG85 94 aa8.81□□□□□ -1
SNX1-213ENST00000561026 MUSTN1Q8IVN3 82 aa8.8□□□□□ -1
SNX1-213ENST00000561026 ATOH7Q8N100 152 aa8.79□□□□□ -1
SNX1-213ENST00000561026 IGLV8-61A0A075B6I0 122 aa8.78□□□□□ -1
SNX1-213ENST00000561026 A4D1N5 150 aa8.78□□□□□ -1
SNX1-213ENST00000561026 KRTAP19-2Q3LHN2 52 aa8.78□□□□□ -1
SNX1-213ENST00000561026 PCP2Q8IVA1 136 aa8.78□□□□□ -1
SNX1-213ENST00000561026 A0A0G2JQZ4 141 aa8.76□□□□□ -1.01
SNX1-213ENST00000561026 C1orf195Q5TG92 126 aa8.76□□□□□ -1.01
SNX1-213ENST00000561026 TRAV13-2A0A0B4J235 113 aa8.75□□□□□ -1.01
SNX1-213ENST00000561026 FSIP2Q5CZC0 6907 aa8.75□□□□□ -1.01
SNX1-213ENST00000561026 SMIM11BQ8TCY0 68 aa8.74□□□□□ -1.01
SNX1-213ENST00000561026 NHP2Q9NX24 153 aaKnown RBP8.74□□□□□ -1.01
SNX1-213ENST00000561026 SNRPEP62304 92 aaKnown RBP8.72□□□□□ -1.01
SNX1-213ENST00000561026 MT1HP80294 61 aa8.72□□□□□ -1.01
SNX1-213ENST00000561026 TCL1BO95988 128 aa8.68□□□□□ -1.02
SNX1-213ENST00000561026 VAMP3Q15836 100 aa8.68□□□□□ -1.02
SNX1-213ENST00000561026 RPL37P61927 97 aaKnown RBP8.67□□□□□ -1.02
SNX1-213ENST00000561026 LINC00575Q6W349 94 aa8.67□□□□□ -1.02
SNX1-213ENST00000561026 F8WEM9 126 aa8.66□□□□□ -1.02
SNX1-213ENST00000561026 CFC1BP0CG36 223 aa8.64□□□□□ -1.03
SNX1-213ENST00000561026 hADV29S1A0JD25 119 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms