RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 FAM19A3Q7Z5A8 133 aa6.06□□□□□ -1.44
CDC42BPB-207ENST00000560492 FAM19A1Q7Z5A9 133 aa6.06□□□□□ -1.44
CDC42BPB-207ENST00000560492 LINC00337Q8N6G1 96 aa6.06□□□□□ -1.44
CDC42BPB-207ENST00000560492 TMEM223A0PJW6 202 aa6.05□□□□□ -1.44
CDC42BPB-207ENST00000560492 E9PLD3 99 aa6.05□□□□□ -1.44
CDC42BPB-207ENST00000560492 SPINK8P0C7L1 97 aa6.05□□□□□ -1.44
CDC42BPB-207ENST00000560492 LGALS3P17931 250 aaKnown RBP6.05□□□□□ -1.44
CDC42BPB-207ENST00000560492 SLC25A34Q6PIV7 304 aa6.05□□□□□ -1.44
CDC42BPB-207ENST00000560492 PLEKHB2Q96CS7 222 aa6.05□□□□□ -1.44
CDC42BPB-207ENST00000560492 C14orf144Q96I85 54 aa6.05□□□□□ -1.44
CDC42BPB-207ENST00000560492 UQCR10Q9UDW1 63 aa6.05□□□□□ -1.44
CDC42BPB-207ENST00000560492 IGLV5-45A0A087WSX0 123 aa6.04□□□□□ -1.44
CDC42BPB-207ENST00000560492 LEPROTO15243 131 aa6.04□□□□□ -1.44
CDC42BPB-207ENST00000560492 COX8AP10176 69 aa6.04□□□□□ -1.44
CDC42BPB-207ENST00000560492 COX7B2Q8TF08 81 aa6.04□□□□□ -1.44
CDC42BPB-207ENST00000560492 MIEN1Q9BRT3 115 aa6.03□□□□□ -1.44
CDC42BPB-207ENST00000560492 ZNF815PA8K554 130 aa6.02□□□□□ -1.45
CDC42BPB-207ENST00000560492 J3QQQ9 107 aa6.02□□□□□ -1.45
CDC42BPB-207ENST00000560492 KRTAP13-1Q8IUC0 172 aa6.02□□□□□ -1.45
CDC42BPB-207ENST00000560492 PCP2Q8IVA1 136 aa6.02□□□□□ -1.45
CDC42BPB-207ENST00000560492 C3orf22Q8N5N4 141 aa6.02□□□□□ -1.45
CDC42BPB-207ENST00000560492 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
CDC42BPB-207ENST00000560492 MYMXA0A1B0GTQ4 84 aa6.01□□□□□ -1.45
CDC42BPB-207ENST00000560492 SMIM1B2RUZ4 78 aa6.01□□□□□ -1.45
CDC42BPB-207ENST00000560492 DDTP30046 118 aa6.01□□□□□ -1.45
CDC42BPB-207ENST00000560492 PFN2P35080 140 aa6.01□□□□□ -1.45
CDC42BPB-207ENST00000560492 SCGB1D4Q6XE38 83 aa6.01□□□□□ -1.45
CDC42BPB-207ENST00000560492 HIGD2AQ9BW72 106 aa6.01□□□□□ -1.45
CDC42BPB-207ENST00000560492 IGLV5-37A0A075B6J1 123 aa6□□□□□ -1.45
CDC42BPB-207ENST00000560492 TMEM238C9JI98 176 aa6□□□□□ -1.45
CDC42BPB-207ENST00000560492 DLEU1O43261 78 aa6□□□□□ -1.45
CDC42BPB-207ENST00000560492 SPAG11AQ6PDA7 123 aa6□□□□□ -1.45
CDC42BPB-207ENST00000560492 BOD1L2Q8IYS8 172 aa6□□□□□ -1.45
CDC42BPB-207ENST00000560492 TMEM126AQ9H061 195 aa6□□□□□ -1.45
CDC42BPB-207ENST00000560492 IGLV5-39A0A0G2JS06 123 aa5.99□□□□□ -1.45
CDC42BPB-207ENST00000560492 TSPEAR-AS2P59090 65 aa5.99□□□□□ -1.45
CDC42BPB-207ENST00000560492 CTAG1AP78358 180 aa5.99□□□□□ -1.45
CDC42BPB-207ENST00000560492 TTTY13Q9BZ97 58 aa5.99□□□□□ -1.45
CDC42BPB-207ENST00000560492 NDUFA12Q9UI09 145 aa5.99□□□□□ -1.45
CDC42BPB-207ENST00000560492 FP248Q71RG6 208 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPB-207ENST00000560492 SEC61BP60468 96 aaKnown RBP5.97□□□□□ -1.45
CDC42BPB-207ENST00000560492 RPL24P83731 157 aaKnown RBP5.97□□□□□ -1.45
CDC42BPB-207ENST00000560492 SFTA2Q6UW10 78 aa5.97□□□□□ -1.45
CDC42BPB-207ENST00000560492 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
CDC42BPB-207ENST00000560492 HERV-K104P63124 156 aa5.96□□□□□ -1.46
CDC42BPB-207ENST00000560492 DAND5Q8N907 189 aa5.96□□□□□ -1.46
CDC42BPB-207ENST00000560492 M0R378 163 aa5.95□□□□□ -1.46
CDC42BPB-207ENST00000560492 VPREB1P12018 145 aa5.95□□□□□ -1.46
CDC42BPB-207ENST00000560492 KRTAP13-3Q3SY46 172 aa5.95□□□□□ -1.46
CDC42BPB-207ENST00000560492 ASB16-AS1Q495Z4 193 aa5.95□□□□□ -1.46
CDC42BPB-207ENST00000560492 MEIG1Q5JSS6 88 aa5.95□□□□□ -1.46
CDC42BPB-207ENST00000560492 C2orf91Q6ZV80 131 aa5.95□□□□□ -1.46
CDC42BPB-207ENST00000560492 Q8NBF4 154 aa5.95□□□□□ -1.46
CDC42BPB-207ENST00000560492 HIST1H4GQ99525 98 aa5.95□□□□□ -1.46
CDC42BPB-207ENST00000560492 SND1-IT1Q9HBX3 110 aa5.95□□□□□ -1.46
CDC42BPB-207ENST00000560492 HIGD1BQ9P298 99 aa5.95□□□□□ -1.46
CDC42BPB-207ENST00000560492 ZNF706Q9Y5V0 76 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPB-207ENST00000560492 A0A0J9YXY3 114 aa5.94□□□□□ -1.46
CDC42BPB-207ENST00000560492 M0R143 59 aa5.94□□□□□ -1.46
CDC42BPB-207ENST00000560492 HSD52Q0P140 79 aa5.94□□□□□ -1.46
CDC42BPB-207ENST00000560492 BATFQ16520 125 aa5.94□□□□□ -1.46
CDC42BPB-207ENST00000560492 ZNF625Q96I27 306 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPB-207ENST00000560492 LINC00587B1AMM8 73 aa5.93□□□□□ -1.46
CDC42BPB-207ENST00000560492 SPRR4Q96PI1 79 aa5.93□□□□□ -1.46
CDC42BPB-207ENST00000560492 ERG28Q9UKR5 140 aa5.93□□□□□ -1.46
CDC42BPB-207ENST00000560492 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
CDC42BPB-207ENST00000560492 TIMM17BO60830 172 aa5.91□□□□□ -1.46
CDC42BPB-207ENST00000560492 HINT1P49773 126 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPB-207ENST00000560492 TAL2Q16559 108 aa5.91□□□□□ -1.46
CDC42BPB-207ENST00000560492 COPS9Q8WXC6 57 aa5.91□□□□□ -1.46
CDC42BPB-207ENST00000560492 KRTAP4-1Q9BYQ7 146 aa5.91□□□□□ -1.46
CDC42BPB-207ENST00000560492 SPANXB1Q9NS25 103 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPB-207ENST00000560492 A0A0U1RRA0 63 aa5.9□□□□□ -1.46
CDC42BPB-207ENST00000560492 SPINK1P00995 79 aa5.9□□□□□ -1.46
CDC42BPB-207ENST00000560492 SMIM13P0DJ93 91 aa5.9□□□□□ -1.46
CDC42BPB-207ENST00000560492 LINC00158P58513 81 aa5.9□□□□□ -1.46
CDC42BPB-207ENST00000560492 CEND1Q8N111 149 aa5.9□□□□□ -1.46
CDC42BPB-207ENST00000560492 COX17Q14061 63 aa5.89□□□□□ -1.47
CDC42BPB-207ENST00000560492 BVES-AS1Q5T3Y7 98 aa5.89□□□□□ -1.47
CDC42BPB-207ENST00000560492 Q6ZVH6 145 aa5.89□□□□□ -1.47
CDC42BPB-207ENST00000560492 SPANXDQ9BXN6 97 aa5.89□□□□□ -1.47
CDC42BPB-207ENST00000560492 SPANXCQ9NY87 97 aa5.89□□□□□ -1.47
CDC42BPB-207ENST00000560492 FSIP2Q5CZC0 6907 aa5.88□□□□□ -1.47
CDC42BPB-207ENST00000560492 IGLV9-49A0A0B4J1Y8 123 aa5.88□□□□□ -1.47
CDC42BPB-207ENST00000560492 ETDCA0A1B0GVM5 59 aa5.88□□□□□ -1.47
CDC42BPB-207ENST00000560492 A6NDN8 102 aa5.88□□□□□ -1.47
CDC42BPB-207ENST00000560492 NPC2P61916 151 aa5.88□□□□□ -1.47
CDC42BPB-207ENST00000560492 Q8NDZ9 215 aa5.88□□□□□ -1.47
CDC42BPB-207ENST00000560492 IFITM1P13164 125 aa5.87□□□□□ -1.47
CDC42BPB-207ENST00000560492 MOBPQ13875 183 aa5.87□□□□□ -1.47
CDC42BPB-207ENST00000560492 GAGE2AQ6NT46 116 aa5.87□□□□□ -1.47
CDC42BPB-207ENST00000560492 MIR7-3HGQ8N6C7 128 aa5.87□□□□□ -1.47
CDC42BPB-207ENST00000560492 SMCR5Q8TEV8 140 aa5.87□□□□□ -1.47
CDC42BPB-207ENST00000560492 LITAFQ99732 161 aa5.87□□□□□ -1.47
CDC42BPB-207ENST00000560492 SNHG12Q9BXW3 62 aa5.87□□□□□ -1.47
CDC42BPB-207ENST00000560492 PRYO14603 147 aa5.86□□□□□ -1.47
CDC42BPB-207ENST00000560492 NCR3O14931 201 aa5.86□□□□□ -1.47
CDC42BPB-207ENST00000560492 FXYD2P54710 66 aa5.86□□□□□ -1.47
CDC42BPB-207ENST00000560492 ADAMTSL4-AS1Q5T5F5 129 aa5.86□□□□□ -1.47
CDC42BPB-207ENST00000560492 COL5A1-AS1Q5SY13 56 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms