RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 UBE2DNLQ8IWF7 75 aa9.23□□□□□ -0.93
CARMIL3-203ENST00000560349 NDUFC2-KCTD14E9PQ53 114 aa9.23□□□□□ -0.93
CARMIL3-203ENST00000560349 HIST1H4AP62805 103 aaKnown RBP9.23□□□□□ -0.93
CARMIL3-203ENST00000560349 Q8N814 137 aa9.22□□□□□ -0.93
CARMIL3-203ENST00000560349 DYNC2H1Q8NCM8 4307 aaKnown RBP9.22□□□□□ -0.93
CARMIL3-203ENST00000560349 ATOX1O00244 68 aa9.2□□□□□ -0.94
CARMIL3-203ENST00000560349 Q6JHZ5 121 aa9.2□□□□□ -0.94
CARMIL3-203ENST00000560349 FBN3Q75N90 2809 aa9.2□□□□□ -0.94
CARMIL3-203ENST00000560349 VPREB1P12018 145 aa9.2□□□□□ -0.94
CARMIL3-203ENST00000560349 UPK3BQ9BT76 320 aa9.2□□□□□ -0.94
CARMIL3-203ENST00000560349 APLNQ9ULZ1 77 aa9.2□□□□□ -0.94
CARMIL3-203ENST00000560349 IGLV6-57P01721 117 aa9.19□□□□□ -0.94
CARMIL3-203ENST00000560349 CCKP06307 115 aa9.19□□□□□ -0.94
CARMIL3-203ENST00000560349 A0A087WVE0 104 aa9.19□□□□□ -0.94
CARMIL3-203ENST00000560349 FAM168BA1KXE4 195 aa9.18□□□□□ -0.94
CARMIL3-203ENST00000560349 SERTAD4-AS1Q5TG53 156 aa9.18□□□□□ -0.94
CARMIL3-203ENST00000560349 V9GYY9 64 aa9.18□□□□□ -0.94
CARMIL3-203ENST00000560349 FAM236DA0A1B0GTK5 79 aa9.18□□□□□ -0.94
CARMIL3-203ENST00000560349 FAM236CP0DP71 79 aa9.18□□□□□ -0.94
CARMIL3-203ENST00000560349 TRAV23DV6A0A075B6W5 121 aa9.17□□□□□ -0.94
CARMIL3-203ENST00000560349 TMEM256-PLSCR3K7ERE1 68 aa9.17□□□□□ -0.94
CARMIL3-203ENST00000560349 KMT2AQ03164 3969 aa9.17□□□□□ -0.94
CARMIL3-203ENST00000560349 MUC7Q8TAX7 377 aa9.16□□□□□ -0.94
CARMIL3-203ENST00000560349 JMJD7-PLA2G4BH0Y9G9 81 aa9.16□□□□□ -0.94
CARMIL3-203ENST00000560349 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.15□□□□□ -0.95
CARMIL3-203ENST00000560349 PSCAO43653 123 aa9.15□□□□□ -0.95
CARMIL3-203ENST00000560349 SERP2Q8N6R1 65 aa9.14□□□□□ -0.95
CARMIL3-203ENST00000560349 RMI2Q96E14 147 aa9.14□□□□□ -0.95
CARMIL3-203ENST00000560349 ZNF73O43830 326 aaPredicted RBP9.14□□□□□ -0.95
CARMIL3-203ENST00000560349 LINC00575Q6W349 94 aa9.14□□□□□ -0.95
CARMIL3-203ENST00000560349 RPL37AP8A6NKH3 93 aa9.13□□□□□ -0.95
CARMIL3-203ENST00000560349 DIRC1Q969H9 104 aa9.13□□□□□ -0.95
CARMIL3-203ENST00000560349 M0R2N4 97 aa9.12□□□□□ -0.95
CARMIL3-203ENST00000560349 M0R378 163 aa9.11□□□□□ -0.95
CARMIL3-203ENST00000560349 Q6ZQY7 126 aa9.11□□□□□ -0.95
CARMIL3-203ENST00000560349 NKAPP1Q8N9T2 125 aa9.11□□□□□ -0.95
CARMIL3-203ENST00000560349 IGKV2-24A0A0C4DH68 120 aa9.1□□□□□ -0.95
CARMIL3-203ENST00000560349 A0A0U1RQV1 116 aa9.09□□□□□ -0.95
CARMIL3-203ENST00000560349 KRTAP7-1Q8IUC3 87 aa9.09□□□□□ -0.95
CARMIL3-203ENST00000560349 C7orf33Q8WU49 177 aa9.09□□□□□ -0.95
CARMIL3-203ENST00000560349 C1orf195Q5TG92 126 aa9.09□□□□□ -0.95
CARMIL3-203ENST00000560349 COX7BP24311 80 aa9.08□□□□□ -0.96
CARMIL3-203ENST00000560349 FAM19A1Q7Z5A9 133 aa9.08□□□□□ -0.96
CARMIL3-203ENST00000560349 SRRM2Q9UQ35 2752 aaKnown RBP9.08□□□□□ -0.96
CARMIL3-203ENST00000560349 NUPR2A6NF83 97 aa9.07□□□□□ -0.96
CARMIL3-203ENST00000560349 VPS13DQ5THJ4 4388 aa9.07□□□□□ -0.96
CARMIL3-203ENST00000560349 FUSP35637 526 aaKnown RBP eCLIP9.06□□□□□ -0.96
CARMIL3-203ENST00000560349 RBM3P98179 157 aaKnown RBP9.06□□□□□ -0.96
CARMIL3-203ENST00000560349 Q6ZQT0 140 aa9.06□□□□□ -0.96
CARMIL3-203ENST00000560349 ELOF1P60002 83 aaKnown RBP9.06□□□□□ -0.96
CARMIL3-203ENST00000560349 A0A096LNI7 61 aa9.05□□□□□ -0.96
CARMIL3-203ENST00000560349 EPM2AB3EWF7 344 aa9.05□□□□□ -0.96
CARMIL3-203ENST00000560349 TLX1NBP0CAT3 122 aa9.05□□□□□ -0.96
CARMIL3-203ENST00000560349 NBDYA0A0U1RRE5 68 aa9.04□□□□□ -0.96
CARMIL3-203ENST00000560349 LAMTOR3Q9UHA4 124 aa9.04□□□□□ -0.96
CARMIL3-203ENST00000560349 CHTF8P0CG12 524 aa9.04□□□□□ -0.96
CARMIL3-203ENST00000560349 ATP5EP2Q5VTU8 51 aa9.04□□□□□ -0.96
CARMIL3-203ENST00000560349 UBL5Q9BZL1 73 aa9.04□□□□□ -0.96
CARMIL3-203ENST00000560349 DNAH2Q9P225 4427 aa9.04□□□□□ -0.96
CARMIL3-203ENST00000560349 LOC110117498A0A087WWA1 95 aa9.03□□□□□ -0.96
CARMIL3-203ENST00000560349 FP248Q71RG6 208 aaPredicted RBP9.03□□□□□ -0.96
CARMIL3-203ENST00000560349 BRK1Q8WUW1 75 aa9.02□□□□□ -0.97
CARMIL3-203ENST00000560349 LINC00528Q8N1L1 170 aa9.01□□□□□ -0.97
CARMIL3-203ENST00000560349 GHRHP01286 108 aa9□□□□□ -0.97
CARMIL3-203ENST00000560349 DEFB105AQ8NG35 78 aa9□□□□□ -0.97
CARMIL3-203ENST00000560349 SERP1Q9Y6X1 66 aa9□□□□□ -0.97
CARMIL3-203ENST00000560349 HECTD4Q9Y4D8 3996 aa9□□□□□ -0.97
CARMIL3-203ENST00000560349 KCNQ1DNQ9H478 68 aa8.99□□□□□ -0.97
CARMIL3-203ENST00000560349 A0A1W2PNN7 141 aa8.99□□□□□ -0.97
CARMIL3-203ENST00000560349 MRPL55Q7Z7F7 128 aaKnown RBP8.99□□□□□ -0.97
CARMIL3-203ENST00000560349 IGLV1-50A0A075B6I6 118 aa8.98□□□□□ -0.97
CARMIL3-203ENST00000560349 LRCOL1A6NCL2 159 aa8.98□□□□□ -0.97
CARMIL3-203ENST00000560349 C20orf197Q8N268 126 aa8.97□□□□□ -0.97
CARMIL3-203ENST00000560349 LINC01547P58512 204 aaPredicted RBP8.97□□□□□ -0.97
CARMIL3-203ENST00000560349 CNBPP62633 177 aaKnown RBP8.97□□□□□ -0.97
CARMIL3-203ENST00000560349 Q6ZRN7 208 aaPredicted RBP8.97□□□□□ -0.97
CARMIL3-203ENST00000560349 Q6ZVQ6 151 aa8.97□□□□□ -0.97
CARMIL3-203ENST00000560349 HAMPP81172 84 aa8.96□□□□□ -0.98
CARMIL3-203ENST00000560349 Q9BRP9 147 aa8.96□□□□□ -0.98
CARMIL3-203ENST00000560349 LINC00474Q9P2X8 69 aa8.95□□□□□ -0.98
CARMIL3-203ENST00000560349 PLA2G2DQ9UNK4 145 aa8.95□□□□□ -0.98
CARMIL3-203ENST00000560349 ETDCA0A1B0GVM5 59 aa8.95□□□□□ -0.98
CARMIL3-203ENST00000560349 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.95□□□□□ -0.98
CARMIL3-203ENST00000560349 SMIM26A0A096LP01 95 aa8.94□□□□□ -0.98
CARMIL3-203ENST00000560349 TRBV7-6A0A0J9YX20 115 aa8.94□□□□□ -0.98
CARMIL3-203ENST00000560349 C16orf90A8MZG2 172 aa8.94□□□□□ -0.98
CARMIL3-203ENST00000560349 PANO1I0J062 215 aa8.94□□□□□ -0.98
CARMIL3-203ENST00000560349 ST20-AS1Q8NBB2 130 aa8.94□□□□□ -0.98
CARMIL3-203ENST00000560349 H7BZZ5 65 aa8.94□□□□□ -0.98
CARMIL3-203ENST00000560349 ERC2-IT1O76042 136 aa8.93□□□□□ -0.98
CARMIL3-203ENST00000560349 IGLV5-37A0A075B6J1 123 aa8.93□□□□□ -0.98
CARMIL3-203ENST00000560349 TRBV7-4A0A0J9YYF1 115 aa8.93□□□□□ -0.98
CARMIL3-203ENST00000560349 KRTAP4-16G5E9R7 235 aaPredicted RBP8.93□□□□□ -0.98
CARMIL3-203ENST00000560349 H3BQ85 93 aa8.93□□□□□ -0.98
CARMIL3-203ENST00000560349 PDE6GP18545 87 aa8.93□□□□□ -0.98
CARMIL3-203ENST00000560349 Q6ZRX8 168 aa8.93□□□□□ -0.98
CARMIL3-203ENST00000560349 PHF5AQ7RTV0 110 aaKnown RBP8.92□□□□□ -0.98
CARMIL3-203ENST00000560349 KRTAP11-1Q8IUC1 163 aa8.92□□□□□ -0.98
CARMIL3-203ENST00000560349 PRLHP81277 87 aa8.91□□□□□ -0.98
CARMIL3-203ENST00000560349 UBE2BP63146 152 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms