RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 LCE2CQ5TA81 110 aa10.38□□□□□ -0.75
CDC42BPB-206ENST00000559790 LITAFQ99732 161 aa10.38□□□□□ -0.75
CDC42BPB-206ENST00000559790 A0A0J9YXY3 114 aa10.37□□□□□ -0.75
CDC42BPB-206ENST00000559790 IGKCP01834 107 aa10.37□□□□□ -0.75
CDC42BPB-206ENST00000559790 FABP4P15090 132 aa10.37□□□□□ -0.75
CDC42BPB-206ENST00000559790 KRTAP19-2Q3LHN2 52 aa10.37□□□□□ -0.75
CDC42BPB-206ENST00000559790 NPC2P61916 151 aa10.36□□□□□ -0.75
CDC42BPB-206ENST00000559790 ZNF73O43830 326 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPB-206ENST00000559790 LGALS3P17931 250 aaKnown RBP10.35□□□□□ -0.75
CDC42BPB-206ENST00000559790 SLC25A20O43772 301 aa10.34□□□□□ -0.75
CDC42BPB-206ENST00000559790 SEC61BP60468 96 aaKnown RBP10.34□□□□□ -0.75
CDC42BPB-206ENST00000559790 S100A12P80511 92 aa10.34□□□□□ -0.75
CDC42BPB-206ENST00000559790 HSPB8Q9UJY1 196 aa10.34□□□□□ -0.75
CDC42BPB-206ENST00000559790 COLCA2A8K830 154 aa10.33□□□□□ -0.76
CDC42BPB-206ENST00000559790 E9PLD3 99 aa10.33□□□□□ -0.76
CDC42BPB-206ENST00000559790 HERVK_113P61574 105 aa10.33□□□□□ -0.76
CDC42BPB-206ENST00000559790 S100A7L2Q5SY68 101 aa10.33□□□□□ -0.76
CDC42BPB-206ENST00000559790 SLC7A5P1Q8MH63 180 aa10.33□□□□□ -0.76
CDC42BPB-206ENST00000559790 MIEN1Q9BRT3 115 aa10.33□□□□□ -0.76
CDC42BPB-206ENST00000559790 SPRR1BP22528 89 aa10.31□□□□□ -0.76
CDC42BPB-206ENST00000559790 C9orf153Q5TBE3 101 aa10.3□□□□□ -0.76
CDC42BPB-206ENST00000559790 JOSD1Q15040 202 aaPredicted RBP10.28□□□□□ -0.76
CDC42BPB-206ENST00000559790 LINC00308Q8TCZ7 52 aa10.28□□□□□ -0.76
CDC42BPB-206ENST00000559790 LINC01547P58512 204 aaPredicted RBP10.27□□□□□ -0.77
CDC42BPB-206ENST00000559790 C5orf52A6NGY3 159 aa10.26□□□□□ -0.77
CDC42BPB-206ENST00000559790 TTTY13Q9BZ97 58 aa10.26□□□□□ -0.77
CDC42BPB-206ENST00000559790 SPANXCQ9NY87 97 aa10.25□□□□□ -0.77
CDC42BPB-206ENST00000559790 SYS1-DBNDD2H3BUS1 97 aa10.24□□□□□ -0.77
CDC42BPB-206ENST00000559790 TIMM17BO60830 172 aa10.23□□□□□ -0.77
CDC42BPB-206ENST00000559790 LINC01545Q5VT33 79 aa10.23□□□□□ -0.77
CDC42BPB-206ENST00000559790 HIST1H2BKO60814 126 aa10.21□□□□□ -0.77
CDC42BPB-206ENST00000559790 HIST1H2BJP06899 126 aa10.21□□□□□ -0.77
CDC42BPB-206ENST00000559790 HIST1H2BOP23527 126 aa10.21□□□□□ -0.77
CDC42BPB-206ENST00000559790 HIST1H2BBP33778 126 aa10.21□□□□□ -0.77
CDC42BPB-206ENST00000559790 HIST1H2BDP58876 126 aa10.21□□□□□ -0.77
CDC42BPB-206ENST00000559790 ELOF1P60002 83 aaKnown RBP10.21□□□□□ -0.77
CDC42BPB-206ENST00000559790 HIST1H2BCP62807 126 aa10.21□□□□□ -0.77
CDC42BPB-206ENST00000559790 HIST2H2BEQ16778 126 aa10.21□□□□□ -0.77
CDC42BPB-206ENST00000559790 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.21□□□□□ -0.77
CDC42BPB-206ENST00000559790 HIST1H2BHQ93079 126 aa10.21□□□□□ -0.77
CDC42BPB-206ENST00000559790 HIST1H2BNQ99877 126 aa10.21□□□□□ -0.77
CDC42BPB-206ENST00000559790 HIST1H2BMQ99879 126 aa10.21□□□□□ -0.77
CDC42BPB-206ENST00000559790 MT1HP80294 61 aa10.19□□□□□ -0.78
CDC42BPB-206ENST00000559790 SPANXDQ9BXN6 97 aa10.19□□□□□ -0.78
CDC42BPB-206ENST00000559790 HRCT1Q6UXD1 115 aa10.18□□□□□ -0.78
CDC42BPB-206ENST00000559790 DHRS4-AS1Q9P1J3 65 aa10.18□□□□□ -0.78
CDC42BPB-206ENST00000559790 PCOTHQ58A44 107 aa10.17□□□□□ -0.78
CDC42BPB-206ENST00000559790 FSIP2Q5CZC0 6907 aa10.16□□□□□ -0.78
CDC42BPB-206ENST00000559790 ZNF815PA8K554 130 aa10.16□□□□□ -0.78
CDC42BPB-206ENST00000559790 C6orf99Q4VX62 202 aa10.16□□□□□ -0.78
CDC42BPB-206ENST00000559790 SMIM29Q86T20 159 aa10.16□□□□□ -0.78
CDC42BPB-206ENST00000559790 OR13C6PQ8NH95 151 aa10.16□□□□□ -0.78
CDC42BPB-206ENST00000559790 C9orf92A6NGG3 77 aa10.15□□□□□ -0.78
CDC42BPB-206ENST00000559790 COX7BP24311 80 aa10.14□□□□□ -0.79
CDC42BPB-206ENST00000559790 LIMD2Q9BT23 127 aa10.14□□□□□ -0.79
CDC42BPB-206ENST00000559790 CBY1Q9Y3M2 126 aa10.14□□□□□ -0.79
CDC42BPB-206ENST00000559790 C3orf79P0CE67 100 aa10.13□□□□□ -0.79
CDC42BPB-206ENST00000559790 HINT1P49773 126 aaPredicted RBP10.13□□□□□ -0.79
CDC42BPB-206ENST00000559790 Q1RN00 199 aa10.13□□□□□ -0.79
CDC42BPB-206ENST00000559790 PET117Q6UWS5 81 aa10.13□□□□□ -0.79
CDC42BPB-206ENST00000559790 A0A0G2JQZ4 141 aa10.12□□□□□ -0.79
CDC42BPB-206ENST00000559790 FLGP20930 4061 aaPredicted RBP10.12□□□□□ -0.79
CDC42BPB-206ENST00000559790 CD164Q04900 197 aa10.11□□□□□ -0.79
CDC42BPB-206ENST00000559790 SLC25A34Q6PIV7 304 aa10.11□□□□□ -0.79
CDC42BPB-206ENST00000559790 LAMTOR3Q9UHA4 124 aa10.11□□□□□ -0.79
CDC42BPB-206ENST00000559790 IGLV5-48A0A075B6I7 105 aa10.1□□□□□ -0.79
CDC42BPB-206ENST00000559790 IGLV8-61A0A075B6I0 122 aa10.09□□□□□ -0.79
CDC42BPB-206ENST00000559790 ANKRD39Q53RE8 183 aa10.09□□□□□ -0.79
CDC42BPB-206ENST00000559790 Q5XG85 94 aa10.09□□□□□ -0.79
CDC42BPB-206ENST00000559790 CRCT1Q9UGL9 99 aa10.09□□□□□ -0.79
CDC42BPB-206ENST00000559790 TRBV7-6A0A0J9YX20 115 aa10.07□□□□□ -0.8
CDC42BPB-206ENST00000559790 H7C2G1 150 aa10.07□□□□□ -0.8
CDC42BPB-206ENST00000559790 C1orf195Q5TG92 126 aa10.07□□□□□ -0.8
CDC42BPB-206ENST00000559790 LINC00518Q8N0U6 118 aa10.07□□□□□ -0.8
CDC42BPB-206ENST00000559790 DEFB105AQ8NG35 78 aa10.07□□□□□ -0.8
CDC42BPB-206ENST00000559790 TEX49A0A1B0GTD5 131 aa10.06□□□□□ -0.8
CDC42BPB-206ENST00000559790 LORP23490 312 aaPredicted RBP10.06□□□□□ -0.8
CDC42BPB-206ENST00000559790 COA6Q5JTJ3 125 aaKnown RBP10.06□□□□□ -0.8
CDC42BPB-206ENST00000559790 PRO1933Q9H354 126 aa10.05□□□□□ -0.8
CDC42BPB-206ENST00000559790 TAL2Q16559 108 aa10.04□□□□□ -0.8
CDC42BPB-206ENST00000559790 A0A1B0GWB2 263 aa10.02□□□□□ -0.81
CDC42BPB-206ENST00000559790 KRTAP10-6P60371 365 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPB-206ENST00000559790 KRTDAPP60985 99 aa10.01□□□□□ -0.81
CDC42BPB-206ENST00000559790 PCP2Q8IVA1 136 aa10.01□□□□□ -0.81
CDC42BPB-206ENST00000559790 IFITM1P13164 125 aa9.99□□□□□ -0.81
CDC42BPB-206ENST00000559790 RPL37P61927 97 aaKnown RBP9.99□□□□□ -0.81
CDC42BPB-206ENST00000559790 ATOH7Q8N100 152 aa9.99□□□□□ -0.81
CDC42BPB-206ENST00000559790 AKR1D1P51857 326 aa9.98□□□□□ -0.81
CDC42BPB-206ENST00000559790 SCGB1D4Q6XE38 83 aa9.98□□□□□ -0.81
CDC42BPB-206ENST00000559790 MUSTN1Q8IVN3 82 aa9.98□□□□□ -0.81
CDC42BPB-206ENST00000559790 SMIM11BQ8TCY0 68 aa9.97□□□□□ -0.81
CDC42BPB-206ENST00000559790 A6NDN8 102 aa9.95□□□□□ -0.82
CDC42BPB-206ENST00000559790 CFC1BP0CG36 223 aa9.95□□□□□ -0.82
CDC42BPB-206ENST00000559790 Q6ZVH6 145 aa9.94□□□□□ -0.82
CDC42BPB-206ENST00000559790 A4D1N5 150 aa9.9□□□□□ -0.82
CDC42BPB-206ENST00000559790 C20orf202A1L168 122 aa9.89□□□□□ -0.83
CDC42BPB-206ENST00000559790 COPS9Q8WXC6 57 aa9.89□□□□□ -0.83
CDC42BPB-206ENST00000559790 TRAV13-2A0A0B4J235 113 aa9.87□□□□□ -0.83
CDC42BPB-206ENST00000559790 LINC00575Q6W349 94 aa9.87□□□□□ -0.83
CDC42BPB-206ENST00000559790 NHP2Q9NX24 153 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms