RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 ARL17AQ8IVW1 177 aa6.29□□□□□ -1.4
HERC1-204ENST00000559715 MIR7-3HGQ8N6C7 128 aa6.29□□□□□ -1.4
HERC1-204ENST00000559715 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
HERC1-204ENST00000559715 ZNF815PA8K554 130 aa6.28□□□□□ -1.4
HERC1-204ENST00000559715 KRTAP13-3Q3SY46 172 aa6.28□□□□□ -1.4
HERC1-204ENST00000559715 NKAPP1Q8N9T2 125 aa6.28□□□□□ -1.4
HERC1-204ENST00000559715 HSBP1L1C9JCN9 74 aa6.27□□□□□ -1.41
HERC1-204ENST00000559715 RPL24P83731 157 aaKnown RBP6.27□□□□□ -1.41
HERC1-204ENST00000559715 LITAFQ99732 161 aa6.27□□□□□ -1.41
HERC1-204ENST00000559715 A0A0U1RRA0 63 aa6.26□□□□□ -1.41
HERC1-204ENST00000559715 SCGB1D1O95968 90 aa6.26□□□□□ -1.41
HERC1-204ENST00000559715 JOSD1Q15040 202 aaPredicted RBP6.26□□□□□ -1.41
HERC1-204ENST00000559715 ASB16-AS1Q495Z4 193 aa6.26□□□□□ -1.41
HERC1-204ENST00000559715 FAM19A1Q7Z5A9 133 aa6.26□□□□□ -1.41
HERC1-204ENST00000559715 TTTY13Q9BZ97 58 aa6.26□□□□□ -1.41
HERC1-204ENST00000559715 SPRR4Q96PI1 79 aa6.25□□□□□ -1.41
HERC1-204ENST00000559715 LOC100996750A0A140TA64 210 aa6.24□□□□□ -1.41
HERC1-204ENST00000559715 ADAMTSL4-AS1Q5T5F5 129 aa6.24□□□□□ -1.41
HERC1-204ENST00000559715 PCP2Q8IVA1 136 aa6.24□□□□□ -1.41
HERC1-204ENST00000559715 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
HERC1-204ENST00000559715 NDUFC2O95298 119 aa6.23□□□□□ -1.41
HERC1-204ENST00000559715 FP248Q71RG6 208 aaPredicted RBP6.23□□□□□ -1.41
HERC1-204ENST00000559715 BOD1L2Q8IYS8 172 aa6.23□□□□□ -1.41
HERC1-204ENST00000559715 DAND5Q8N907 189 aa6.23□□□□□ -1.41
HERC1-204ENST00000559715 MIEN1Q9BRT3 115 aa6.23□□□□□ -1.41
HERC1-204ENST00000559715 SPANXDQ9BXN6 97 aa6.23□□□□□ -1.41
HERC1-204ENST00000559715 SPANXCQ9NY87 97 aa6.23□□□□□ -1.41
HERC1-204ENST00000559715 TRBV10-2A0A0K0K1G8 114 aa6.22□□□□□ -1.41
HERC1-204ENST00000559715 KRTAP4-16G5E9R7 235 aaPredicted RBP6.22□□□□□ -1.41
HERC1-204ENST00000559715 SPAG11AQ6PDA7 123 aa6.22□□□□□ -1.41
HERC1-204ENST00000559715 SOSTDC1Q6X4U4 206 aa6.22□□□□□ -1.41
HERC1-204ENST00000559715 SCGB1D4Q6XE38 83 aa6.22□□□□□ -1.41
HERC1-204ENST00000559715 Q6ZVH6 145 aa6.22□□□□□ -1.41
HERC1-204ENST00000559715 DLEU1O43261 78 aa6.21□□□□□ -1.42
HERC1-204ENST00000559715 KRTAP19-2Q3LHN2 52 aa6.21□□□□□ -1.42
HERC1-204ENST00000559715 PYY3Q5JQD4 70 aa6.21□□□□□ -1.42
HERC1-204ENST00000559715 XP32Q5T750 250 aa6.21□□□□□ -1.42
HERC1-204ENST00000559715 LINC00308Q8TCZ7 52 aa6.21□□□□□ -1.42
HERC1-204ENST00000559715 HIGD2AQ9BW72 106 aa6.21□□□□□ -1.42
HERC1-204ENST00000559715 SPANXB1Q9NS25 103 aaPredicted RBP6.21□□□□□ -1.42
HERC1-204ENST00000559715 COX8AP10176 69 aa6.2□□□□□ -1.42
HERC1-204ENST00000559715 IFITM1P13164 125 aa6.2□□□□□ -1.42
HERC1-204ENST00000559715 SPRR1AP35321 89 aa6.2□□□□□ -1.42
HERC1-204ENST00000559715 C21orf62-AS1Q17RA5 79 aa6.2□□□□□ -1.42
HERC1-204ENST00000559715 COPS9Q8WXC6 57 aa6.2□□□□□ -1.42
HERC1-204ENST00000559715 Q8NBF4 154 aa6.19□□□□□ -1.42
HERC1-204ENST00000559715 VAMP8Q9BV40 100 aa6.19□□□□□ -1.42
HERC1-204ENST00000559715 CRCT1Q9UGL9 99 aa6.18□□□□□ -1.42
HERC1-204ENST00000559715 PAM16Q9Y3D7 125 aa6.18□□□□□ -1.42
HERC1-204ENST00000559715 NCR3O14931 201 aa6.17□□□□□ -1.42
HERC1-204ENST00000559715 SPATA45Q537H7 98 aa6.17□□□□□ -1.42
HERC1-204ENST00000559715 LINC00483Q53H64 154 aa6.17□□□□□ -1.42
HERC1-204ENST00000559715 SMCR5Q8TEV8 140 aa6.17□□□□□ -1.42
HERC1-204ENST00000559715 KCNQ1DNQ9H478 68 aa6.17□□□□□ -1.42
HERC1-204ENST00000559715 PRYO14603 147 aa6.16□□□□□ -1.42
HERC1-204ENST00000559715 IGLV6-57P01721 117 aa6.16□□□□□ -1.42
HERC1-204ENST00000559715 NPC2P61916 151 aa6.16□□□□□ -1.42
HERC1-204ENST00000559715 LINC00337Q8N6G1 96 aa6.16□□□□□ -1.42
HERC1-204ENST00000559715 TRBV10-3A0A0K0K1G6 114 aa6.15□□□□□ -1.42
HERC1-204ENST00000559715 LOC105371267A0A1B0GV96 52 aa6.15□□□□□ -1.42
HERC1-204ENST00000559715 SPINK1P00995 79 aa6.15□□□□□ -1.42
HERC1-204ENST00000559715 LINC01547P58512 204 aaPredicted RBP6.15□□□□□ -1.42
HERC1-204ENST00000559715 LINC00518Q8N0U6 118 aa6.15□□□□□ -1.42
HERC1-204ENST00000559715 Q8N377 158 aa6.15□□□□□ -1.42
HERC1-204ENST00000559715 ERC2-IT1O76042 136 aa6.14□□□□□ -1.43
HERC1-204ENST00000559715 DDTP30046 118 aa6.14□□□□□ -1.43
HERC1-204ENST00000559715 S100A12P80511 92 aa6.14□□□□□ -1.43
HERC1-204ENST00000559715 SLC25A34Q6PIV7 304 aa6.14□□□□□ -1.43
HERC1-204ENST00000559715 HIGD1BQ9P298 99 aa6.14□□□□□ -1.43
HERC1-204ENST00000559715 CBY1Q9Y3M2 126 aa6.14□□□□□ -1.43
HERC1-204ENST00000559715 MUSTN1Q8IVN3 82 aa6.13□□□□□ -1.43
HERC1-204ENST00000559715 C14orf144Q96I85 54 aa6.13□□□□□ -1.43
HERC1-204ENST00000559715 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
HERC1-204ENST00000559715 SEC61BP60468 96 aaKnown RBP6.12□□□□□ -1.43
HERC1-204ENST00000559715 RPS29P62273 56 aaKnown RBP6.12□□□□□ -1.43
HERC1-204ENST00000559715 S100A7L2Q5SY68 101 aa6.12□□□□□ -1.43
HERC1-204ENST00000559715 C2orf91Q6ZV80 131 aa6.12□□□□□ -1.43
HERC1-204ENST00000559715 ZNF706Q9Y5V0 76 aaPredicted RBP6.12□□□□□ -1.43
HERC1-204ENST00000559715 TRAV23DV6A0A075B6W5 121 aa6.11□□□□□ -1.43
HERC1-204ENST00000559715 B5MCH6 92 aa6.11□□□□□ -1.43
HERC1-204ENST00000559715 SMIM6P0DI80 62 aa6.11□□□□□ -1.43
HERC1-204ENST00000559715 Q9BRP9 147 aa6.11□□□□□ -1.43
HERC1-204ENST00000559715 MT1HP80294 61 aa6.1□□□□□ -1.43
HERC1-204ENST00000559715 TRAV13-2A0A0B4J235 113 aa6.09□□□□□ -1.43
HERC1-204ENST00000559715 ETDCA0A1B0GVM5 59 aa6.09□□□□□ -1.43
HERC1-204ENST00000559715 ZNF73O43830 326 aaPredicted RBP6.09□□□□□ -1.43
HERC1-204ENST00000559715 TAL2Q16559 108 aa6.09□□□□□ -1.43
HERC1-204ENST00000559715 SSBP3-AS1Q7Z2R9 100 aa6.09□□□□□ -1.43
HERC1-204ENST00000559715 HIST1H4GQ99525 98 aa6.09□□□□□ -1.43
HERC1-204ENST00000559715 A4D1N5 150 aa6.08□□□□□ -1.44
HERC1-204ENST00000559715 MOBPQ13875 183 aa6.08□□□□□ -1.44
HERC1-204ENST00000559715 GAGE2AQ6NT46 116 aa6.08□□□□□ -1.44
HERC1-204ENST00000559715 Q6ZRX8 168 aa6.08□□□□□ -1.44
HERC1-204ENST00000559715 OR13C6PQ8NH95 151 aa6.08□□□□□ -1.44
HERC1-204ENST00000559715 UQCR10Q9UDW1 63 aa6.07□□□□□ -1.44
HERC1-204ENST00000559715 IGLV9-49A0A0B4J1Y8 123 aa6.06□□□□□ -1.44
HERC1-204ENST00000559715 TRBV7-6A0A0J9YX20 115 aa6.05□□□□□ -1.44
HERC1-204ENST00000559715 A6NDN8 102 aa6.05□□□□□ -1.44
HERC1-204ENST00000559715 SLC25A20O43772 301 aa6.05□□□□□ -1.44
HERC1-204ENST00000559715 HINT1P49773 126 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms