RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 NMUP48645 174 aa11.46□□□□□ -0.57
TSPAN3-206ENST00000559373 C9orf153Q5TBE3 101 aa11.46□□□□□ -0.57
TSPAN3-206ENST00000559373 SLC7A5P1Q8MH63 180 aa11.46□□□□□ -0.57
TSPAN3-206ENST00000559373 SSBP3-AS1Q7Z2R9 100 aa11.45□□□□□ -0.58
TSPAN3-206ENST00000559373 NDUFC2O95298 119 aa11.44□□□□□ -0.58
TSPAN3-206ENST00000559373 ASB16-AS1Q495Z4 193 aa11.44□□□□□ -0.58
TSPAN3-206ENST00000559373 COLCA2A8K830 154 aa11.42□□□□□ -0.58
TSPAN3-206ENST00000559373 ZNF73O43830 326 aaPredicted RBP11.42□□□□□ -0.58
TSPAN3-206ENST00000559373 E9PLD3 99 aa11.39□□□□□ -0.59
TSPAN3-206ENST00000559373 SLC25A20O43772 301 aa11.39□□□□□ -0.59
TSPAN3-206ENST00000559373 JOSD1Q15040 202 aaPredicted RBP11.39□□□□□ -0.59
TSPAN3-206ENST00000559373 OR13C6PQ8NH95 151 aa11.38□□□□□ -0.59
TSPAN3-206ENST00000559373 HRCT1Q6UXD1 115 aa11.37□□□□□ -0.59
TSPAN3-206ENST00000559373 SEC61BP60468 96 aaKnown RBP11.36□□□□□ -0.59
TSPAN3-206ENST00000559373 RPS29P62273 56 aaKnown RBP11.36□□□□□ -0.59
TSPAN3-206ENST00000559373 LITAFQ99732 161 aa11.35□□□□□ -0.59
TSPAN3-206ENST00000559373 TTTY13Q9BZ97 58 aa11.35□□□□□ -0.59
TSPAN3-206ENST00000559373 SYS1-DBNDD2H3BUS1 97 aa11.34□□□□□ -0.59
TSPAN3-206ENST00000559373 LINC00308Q8TCZ7 52 aa11.34□□□□□ -0.59
TSPAN3-206ENST00000559373 HINT1P49773 126 aaPredicted RBP11.32□□□□□ -0.6
TSPAN3-206ENST00000559373 XP32Q5T750 250 aa11.32□□□□□ -0.6
TSPAN3-206ENST00000559373 LINC01547P58512 204 aaPredicted RBP11.31□□□□□ -0.6
TSPAN3-206ENST00000559373 SPANXCQ9NY87 97 aa11.3□□□□□ -0.6
TSPAN3-206ENST00000559373 KRTAP9-6A0A140TA67 174 aa11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 ZNF815PA8K554 130 aa11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 HIST1H2BKO60814 126 aa11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 HIST1H2BJP06899 126 aa11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 HIST1H2BOP23527 126 aa11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 HIST1H2BBP33778 126 aa11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 HIST1H2BDP58876 126 aa11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 HIST1H2BCP62807 126 aa11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 HIST2H2BEQ16778 126 aa11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 HIST1H2BHQ93079 126 aa11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 HIST1H2BNQ99877 126 aa11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 HIST1H2BMQ99879 126 aa11.28□□□□□ -0.6
TSPAN3-206ENST00000559373 DEFB105AQ8NG35 78 aa11.27□□□□□ -0.61
TSPAN3-206ENST00000559373 C9orf92A6NGG3 77 aa11.26□□□□□ -0.61
TSPAN3-206ENST00000559373 LINC01545Q5VT33 79 aa11.26□□□□□ -0.61
TSPAN3-206ENST00000559373 TIMM17BO60830 172 aa11.25□□□□□ -0.61
TSPAN3-206ENST00000559373 Q1RN00 199 aa11.25□□□□□ -0.61
TSPAN3-206ENST00000559373 SPRR1BP22528 89 aa11.24□□□□□ -0.61
TSPAN3-206ENST00000559373 C6orf99Q4VX62 202 aa11.24□□□□□ -0.61
TSPAN3-206ENST00000559373 CBY1Q9Y3M2 126 aa11.24□□□□□ -0.61
TSPAN3-206ENST00000559373 COX7BP24311 80 aa11.23□□□□□ -0.61
TSPAN3-206ENST00000559373 SPANXDQ9BXN6 97 aa11.23□□□□□ -0.61
TSPAN3-206ENST00000559373 DHRS4-AS1Q9P1J3 65 aa11.23□□□□□ -0.61
TSPAN3-206ENST00000559373 C5orf52A6NGY3 159 aa11.22□□□□□ -0.61
TSPAN3-206ENST00000559373 C3orf79P0CE67 100 aa11.22□□□□□ -0.61
TSPAN3-206ENST00000559373 PET117Q6UWS5 81 aa11.22□□□□□ -0.61
TSPAN3-206ENST00000559373 LAMTOR3Q9UHA4 124 aa11.22□□□□□ -0.61
TSPAN3-206ENST00000559373 H7C2G1 150 aa11.21□□□□□ -0.61
TSPAN3-206ENST00000559373 ELOF1P60002 83 aaKnown RBP11.21□□□□□ -0.61
TSPAN3-206ENST00000559373 TAL2Q16559 108 aa11.21□□□□□ -0.61
TSPAN3-206ENST00000559373 A0A0G2JQZ4 141 aa11.19□□□□□ -0.62
TSPAN3-206ENST00000559373 KRTDAPP60985 99 aa11.19□□□□□ -0.62
TSPAN3-206ENST00000559373 PCOTHQ58A44 107 aa11.19□□□□□ -0.62
TSPAN3-206ENST00000559373 SLC25A34Q6PIV7 304 aa11.19□□□□□ -0.62
TSPAN3-206ENST00000559373 LIMD2Q9BT23 127 aa11.19□□□□□ -0.62
TSPAN3-206ENST00000559373 LCE2CQ5TA81 110 aa11.17□□□□□ -0.62
TSPAN3-206ENST00000559373 SCGB1D4Q6XE38 83 aa11.16□□□□□ -0.62
TSPAN3-206ENST00000559373 LINC00518Q8N0U6 118 aa11.16□□□□□ -0.62
TSPAN3-206ENST00000559373 ANKRD39Q53RE8 183 aa11.15□□□□□ -0.62
TSPAN3-206ENST00000559373 ATOH7Q8N100 152 aa11.15□□□□□ -0.62
TSPAN3-206ENST00000559373 IGLV8-61A0A075B6I0 122 aa11.13□□□□□ -0.63
TSPAN3-206ENST00000559373 A6NDN8 102 aa11.13□□□□□ -0.63
TSPAN3-206ENST00000559373 TEX49A0A1B0GTD5 131 aa11.12□□□□□ -0.63
TSPAN3-206ENST00000559373 SMIM29Q86T20 159 aa11.12□□□□□ -0.63
TSPAN3-206ENST00000559373 KRTAP19-2Q3LHN2 52 aa11.11□□□□□ -0.63
TSPAN3-206ENST00000559373 PRO1933Q9H354 126 aa11.11□□□□□ -0.63
TSPAN3-206ENST00000559373 MUSTN1Q8IVN3 82 aa11.1□□□□□ -0.63
TSPAN3-206ENST00000559373 PCP2Q8IVA1 136 aa11.09□□□□□ -0.63
TSPAN3-206ENST00000559373 A0A1B0GWB2 263 aa11.07□□□□□ -0.64
TSPAN3-206ENST00000559373 AKR1D1P51857 326 aa11.07□□□□□ -0.64
TSPAN3-206ENST00000559373 CD164Q04900 197 aa11.07□□□□□ -0.64
TSPAN3-206ENST00000559373 TRBV7-6A0A0J9YX20 115 aa11.06□□□□□ -0.64
TSPAN3-206ENST00000559373 LCE2DQ5TA82 110 aaPredicted RBP11.06□□□□□ -0.64
TSPAN3-206ENST00000559373 C1orf195Q5TG92 126 aa11.05□□□□□ -0.64
TSPAN3-206ENST00000559373 IFITM1P13164 125 aa11.04□□□□□ -0.64
TSPAN3-206ENST00000559373 MT1HP80294 61 aa11.04□□□□□ -0.64
TSPAN3-206ENST00000559373 COA6Q5JTJ3 125 aaKnown RBP11.04□□□□□ -0.64
TSPAN3-206ENST00000559373 IGLV5-48A0A075B6I7 105 aa11.03□□□□□ -0.64
TSPAN3-206ENST00000559373 SMIM11BQ8TCY0 68 aa11.03□□□□□ -0.64
TSPAN3-206ENST00000559373 C20orf202A1L168 122 aa11.02□□□□□ -0.65
TSPAN3-206ENST00000559373 COPS9Q8WXC6 57 aa11.01□□□□□ -0.65
TSPAN3-206ENST00000559373 Q5XG85 94 aa10.97□□□□□ -0.65
TSPAN3-206ENST00000559373 Q6ZVH6 145 aa10.97□□□□□ -0.65
TSPAN3-206ENST00000559373 FSIP2Q5CZC0 6907 aa10.95□□□□□ -0.66
TSPAN3-206ENST00000559373 TRAV13-2A0A0B4J235 113 aa10.95□□□□□ -0.66
TSPAN3-206ENST00000559373 A4D1N5 150 aa10.94□□□□□ -0.66
TSPAN3-206ENST00000559373 CRCT1Q9UGL9 99 aa10.93□□□□□ -0.66
TSPAN3-206ENST00000559373 RPL37P61927 97 aaKnown RBP10.92□□□□□ -0.66
TSPAN3-206ENST00000559373 NHP2Q9NX24 153 aaKnown RBP10.92□□□□□ -0.66
TSPAN3-206ENST00000559373 F8WEM9 126 aa10.89□□□□□ -0.67
TSPAN3-206ENST00000559373 LINC00575Q6W349 94 aa10.89□□□□□ -0.67
TSPAN3-206ENST00000559373 TCL1BO95988 128 aa10.88□□□□□ -0.67
TSPAN3-206ENST00000559373 Q6ZQY7 126 aa10.88□□□□□ -0.67
TSPAN3-206ENST00000559373 VAMP3Q15836 100 aa10.87□□□□□ -0.67
TSPAN3-206ENST00000559373 hADV29S1A0JD25 119 aa10.85□□□□□ -0.67
TSPAN3-206ENST00000559373 KRTAP10-6P60371 365 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms