RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 C5orf47Q569G3 176 aa10.8□□□□□ -0.68
SPG11-215ENST00000559193 C11orf45Q8TAV5 145 aa10.8□□□□□ -0.68
SPG11-215ENST00000559193 DNAH10OSP0CZ25 163 aa10.79□□□□□ -0.68
SPG11-215ENST00000559193 H7BZZ5 65 aa10.78□□□□□ -0.68
SPG11-215ENST00000559193 KLKP1Q107X0 134 aa10.77□□□□□ -0.68
SPG11-215ENST00000559193 Q8N377 158 aa10.77□□□□□ -0.69
SPG11-215ENST00000559193 DEFB105AQ8NG35 78 aa10.76□□□□□ -0.69
SPG11-215ENST00000559193 TM2D3Q9BRN9 247 aa10.76□□□□□ -0.69
SPG11-215ENST00000559193 FAM236DA0A1B0GTK5 79 aa10.75□□□□□ -0.69
SPG11-215ENST00000559193 TLX1NBP0CAT3 122 aa10.75□□□□□ -0.69
SPG11-215ENST00000559193 FAM236CP0DP71 79 aa10.75□□□□□ -0.69
SPG11-215ENST00000559193 Q8N9L7 120 aa10.75□□□□□ -0.69
SPG11-215ENST00000559193 SNURFQ9Y675 71 aa10.75□□□□□ -0.69
SPG11-215ENST00000559193 CASC10Q5T4H9 136 aa10.74□□□□□ -0.69
SPG11-215ENST00000559193 RMI2Q96E14 147 aa10.74□□□□□ -0.69
SPG11-215ENST00000559193 FAM168BA1KXE4 195 aa10.73□□□□□ -0.69
SPG11-215ENST00000559193 PLA2G2DQ9UNK4 145 aa10.73□□□□□ -0.69
SPG11-215ENST00000559193 C3orf84H3BNL1 204 aa10.73□□□□□ -0.69
SPG11-215ENST00000559193 IGKV4-1P06312 121 aa10.73□□□□□ -0.69
SPG11-215ENST00000559193 RPL37AP8A6NKH3 93 aa10.72□□□□□ -0.69
SPG11-215ENST00000559193 KRTAP4-16G5E9R7 235 aaPredicted RBP10.72□□□□□ -0.69
SPG11-215ENST00000559193 CMYA5Q8N3K9 4069 aa10.72□□□□□ -0.69
SPG11-215ENST00000559193 IGLV5-48A0A075B6I7 105 aa10.72□□□□□ -0.69
SPG11-215ENST00000559193 NREPQ16612 68 aa10.72□□□□□ -0.69
SPG11-215ENST00000559193 KRTAP24-1Q3LI83 254 aa10.72□□□□□ -0.69
SPG11-215ENST00000559193 Q6ZRX8 168 aa10.72□□□□□ -0.69
SPG11-215ENST00000559193 Q9BRP9 147 aa10.72□□□□□ -0.69
SPG11-215ENST00000559193 MRAPQ8TCY5 172 aa10.71□□□□□ -0.69
SPG11-215ENST00000559193 LINC00588Q9Y4M8 146 aa10.71□□□□□ -0.69
SPG11-215ENST00000559193 KRTAP7-1Q8IUC3 87 aa10.71□□□□□ -0.7
SPG11-215ENST00000559193 IGLV1-50A0A075B6I6 118 aa10.7□□□□□ -0.7
SPG11-215ENST00000559193 IGLV5-37A0A075B6J1 123 aa10.7□□□□□ -0.7
SPG11-215ENST00000559193 BPY2O14599 106 aa10.7□□□□□ -0.7
SPG11-215ENST00000559193 DHRS4-AS1Q9P1J3 65 aa10.7□□□□□ -0.7
SPG11-215ENST00000559193 PRYO14603 147 aa10.69□□□□□ -0.7
SPG11-215ENST00000559193 SPRR1AP35321 89 aa10.69□□□□□ -0.7
SPG11-215ENST00000559193 DNAH1Q9P2D7 4330 aa10.68□□□□□ -0.7
SPG11-215ENST00000559193 F8WEM9 126 aa10.68□□□□□ -0.7
SPG11-215ENST00000559193 C4orf26Q17RF5 130 aa10.68□□□□□ -0.7
SPG11-215ENST00000559193 Q5XG85 94 aa10.68□□□□□ -0.7
SPG11-215ENST00000559193 DNAH3Q8TD57 4116 aa10.67□□□□□ -0.7
SPG11-215ENST00000559193 ST20-AS1Q8NBB2 130 aa10.67□□□□□ -0.7
SPG11-215ENST00000559193 ETDCA0A1B0GVM5 59 aa10.66□□□□□ -0.7
SPG11-215ENST00000559193 EPM2AB3EWF7 344 aa10.66□□□□□ -0.7
SPG11-215ENST00000559193 TNP2Q05952 138 aa10.66□□□□□ -0.7
SPG11-215ENST00000559193 A0A1W2PNM2 257 aa10.66□□□□□ -0.7
SPG11-215ENST00000559193 SERP1Q9Y6X1 66 aa10.65□□□□□ -0.71
SPG11-215ENST00000559193 STAB1Q9NY15 2570 aa10.64□□□□□ -0.71
SPG11-215ENST00000559193 F8P00451 2351 aa10.64□□□□□ -0.71
SPG11-215ENST00000559193 FLNBO75369 2602 aaKnown RBP10.63□□□□□ -0.71
SPG11-215ENST00000559193 FUSP35637 526 aaKnown RBP eCLIP10.63□□□□□ -0.71
SPG11-215ENST00000559193 HRCT1Q6UXD1 115 aa10.63□□□□□ -0.71
SPG11-215ENST00000559193 TMEM254Q8TBM7 123 aa10.63□□□□□ -0.71
SPG11-215ENST00000559193 OCR1Q9BZK8 76 aa10.63□□□□□ -0.71
SPG11-215ENST00000559193 ERC2-IT1O76042 136 aa10.62□□□□□ -0.71
SPG11-215ENST00000559193 C1orf137Q5JT78 98 aa10.62□□□□□ -0.71
SPG11-215ENST00000559193 MRPL55Q7Z7F7 128 aaKnown RBP10.62□□□□□ -0.71
SPG11-215ENST00000559193 NDUFC1O43677 76 aa10.62□□□□□ -0.71
SPG11-215ENST00000559193 FBN1P35555 2871 aaKnown RBP10.61□□□□□ -0.71
SPG11-215ENST00000559193 A0A1B0GW54 56 aa10.6□□□□□ -0.71
SPG11-215ENST00000559193 PRB2P02812 416 aaPredicted RBP10.6□□□□□ -0.71
SPG11-215ENST00000559193 Q8NBF4 154 aa10.6□□□□□ -0.71
SPG11-215ENST00000559193 MAST4O15021 2626 aa10.58□□□□□ -0.72
SPG11-215ENST00000559193 UBE2BP63146 152 aa10.57□□□□□ -0.72
SPG11-215ENST00000559193 SPRR4Q96PI1 79 aa10.57□□□□□ -0.72
SPG11-215ENST00000559193 NOTCH1P46531 2555 aa10.56□□□□□ -0.72
SPG11-215ENST00000559193 A0A0U1RQV1 116 aa10.56□□□□□ -0.72
SPG11-215ENST00000559193 REG3GQ6UW15 175 aa10.55□□□□□ -0.72
SPG11-215ENST00000559193 SMIM29Q86T20 159 aa10.54□□□□□ -0.72
SPG11-215ENST00000559193 HUWE1Q7Z6Z7 4374 aaKnown RBP10.54□□□□□ -0.72
SPG11-215ENST00000559193 ATP5EP56381 51 aaPredicted RBP10.52□□□□□ -0.73
SPG11-215ENST00000559193 DSCR10P59022 87 aa10.51□□□□□ -0.73
SPG11-215ENST00000559193 LINC00476Q8WZB0 136 aa10.5□□□□□ -0.73
SPG11-215ENST00000559193 HIGD2AQ9BW72 106 aa10.5□□□□□ -0.73
SPG11-215ENST00000559193 FAM30AQ9NZY2 134 aa10.5□□□□□ -0.73
SPG11-215ENST00000559193 K7EIL1 84 aa10.49□□□□□ -0.73
SPG11-215ENST00000559193 A0A096LNI7 61 aa10.49□□□□□ -0.73
SPG11-215ENST00000559193 KRTAP1-5Q9BYS1 174 aa10.48□□□□□ -0.73
SPG11-215ENST00000559193 A0A0G2JQZ4 141 aa10.48□□□□□ -0.73
SPG11-215ENST00000559193 A0A1W2PNN7 141 aa10.48□□□□□ -0.73
SPG11-215ENST00000559193 K7EQZ3 153 aa10.48□□□□□ -0.73
SPG11-215ENST00000559193 FP248Q71RG6 208 aaPredicted RBP10.48□□□□□ -0.73
SPG11-215ENST00000559193 SMIM26A0A096LP01 95 aa10.47□□□□□ -0.73
SPG11-215ENST00000559193 PRLHP81277 87 aa10.46□□□□□ -0.73
SPG11-215ENST00000559193 BAHCC1Q9P281 2608 aa10.46□□□□□ -0.74
SPG11-215ENST00000559193 IGKV2-24A0A0C4DH68 120 aa10.46□□□□□ -0.74
SPG11-215ENST00000559193 LCE6AA0A183 80 aa10.45□□□□□ -0.74
SPG11-215ENST00000559193 C16orf90A8MZG2 172 aa10.45□□□□□ -0.74
SPG11-215ENST00000559193 IGFL1Q6UW32 110 aa10.45□□□□□ -0.74
SPG11-215ENST00000559193 DNAH10Q8IVF4 4471 aa10.44□□□□□ -0.74
SPG11-215ENST00000559193 NBEAL1Q6ZS30 2694 aa10.44□□□□□ -0.74
SPG11-215ENST00000559193 CNBPP62633 177 aaKnown RBP10.43□□□□□ -0.74
SPG11-215ENST00000559193 LINC00474Q9P2X8 69 aa10.42□□□□□ -0.74
SPG11-215ENST00000559193 IGLV8-61A0A075B6I0 122 aa10.4□□□□□ -0.74
SPG11-215ENST00000559193 PSCAO43653 123 aa10.39□□□□□ -0.75
SPG11-215ENST00000559193 LINC00336Q6ZUF6 198 aa10.39□□□□□ -0.75
SPG11-215ENST00000559193 FAM229BQ4G0N7 80 aa10.39□□□□□ -0.75
SPG11-215ENST00000559193 HCG22E2RYF7 251 aa10.38□□□□□ -0.75
SPG11-215ENST00000559193 LYSTQ99698 3801 aa10.38□□□□□ -0.75
SPG11-215ENST00000559193 DEFB116Q30KQ4 102 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms