RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 NMUP48645 174 aa7.53□□□□□ -1.2
VPS18-203ENST00000558855 HSPB8Q9UJY1 196 aa7.53□□□□□ -1.2
VPS18-203ENST00000558855 HERVK_113P61574 105 aa7.52□□□□□ -1.21
VPS18-203ENST00000558855 TTTY13Q9BZ97 58 aa7.52□□□□□ -1.21
VPS18-203ENST00000558855 E9PLD3 99 aa7.51□□□□□ -1.21
VPS18-203ENST00000558855 S100A7L2Q5SY68 101 aa7.51□□□□□ -1.21
VPS18-203ENST00000558855 SSBP3-AS1Q7Z2R9 100 aa7.51□□□□□ -1.21
VPS18-203ENST00000558855 ZNF73O43830 326 aaPredicted RBP7.5□□□□□ -1.21
VPS18-203ENST00000558855 MIEN1Q9BRT3 115 aa7.5□□□□□ -1.21
VPS18-203ENST00000558855 RPS29P62273 56 aaKnown RBP7.49□□□□□ -1.21
VPS18-203ENST00000558855 XP32Q5T750 250 aa7.48□□□□□ -1.21
VPS18-203ENST00000558855 C9orf153Q5TBE3 101 aa7.48□□□□□ -1.21
VPS18-203ENST00000558855 LINC00308Q8TCZ7 52 aa7.48□□□□□ -1.21
VPS18-203ENST00000558855 SYS1-DBNDD2H3BUS1 97 aa7.47□□□□□ -1.21
VPS18-203ENST00000558855 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
VPS18-203ENST00000558855 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
VPS18-203ENST00000558855 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
VPS18-203ENST00000558855 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
VPS18-203ENST00000558855 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
VPS18-203ENST00000558855 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
VPS18-203ENST00000558855 S100A12P80511 92 aa7.47□□□□□ -1.21
VPS18-203ENST00000558855 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
VPS18-203ENST00000558855 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.47□□□□□ -1.21
VPS18-203ENST00000558855 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
VPS18-203ENST00000558855 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
VPS18-203ENST00000558855 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
VPS18-203ENST00000558855 KRTAP9-6A0A140TA67 174 aa7.45□□□□□ -1.22
VPS18-203ENST00000558855 SLC25A20O43772 301 aa7.45□□□□□ -1.22
VPS18-203ENST00000558855 LCE2CQ5TA81 110 aa7.45□□□□□ -1.22
VPS18-203ENST00000558855 LINC01545Q5VT33 79 aa7.45□□□□□ -1.22
VPS18-203ENST00000558855 SPRR1BP22528 89 aa7.44□□□□□ -1.22
VPS18-203ENST00000558855 KRTAP19-2Q3LHN2 52 aa7.44□□□□□ -1.22
VPS18-203ENST00000558855 JOSD1Q15040 202 aaPredicted RBP7.43□□□□□ -1.22
VPS18-203ENST00000558855 HRCT1Q6UXD1 115 aa7.43□□□□□ -1.22
VPS18-203ENST00000558855 SPANXCQ9NY87 97 aa7.43□□□□□ -1.22
VPS18-203ENST00000558855 ZNF815PA8K554 130 aa7.42□□□□□ -1.22
VPS18-203ENST00000558855 TIMM17BO60830 172 aa7.42□□□□□ -1.22
VPS18-203ENST00000558855 SEC61BP60468 96 aaKnown RBP7.42□□□□□ -1.22
VPS18-203ENST00000558855 OR13C6PQ8NH95 151 aa7.42□□□□□ -1.22
VPS18-203ENST00000558855 C3orf79P0CE67 100 aa7.41□□□□□ -1.22
VPS18-203ENST00000558855 A0A0G2JQZ4 141 aa7.4□□□□□ -1.22
VPS18-203ENST00000558855 ELOF1P60002 83 aaKnown RBP7.4□□□□□ -1.22
VPS18-203ENST00000558855 C6orf99Q4VX62 202 aa7.4□□□□□ -1.22
VPS18-203ENST00000558855 C9orf92A6NGG3 77 aa7.38□□□□□ -1.23
VPS18-203ENST00000558855 Q1RN00 199 aa7.38□□□□□ -1.23
VPS18-203ENST00000558855 ANKRD39Q53RE8 183 aa7.38□□□□□ -1.23
VPS18-203ENST00000558855 PET117Q6UWS5 81 aa7.38□□□□□ -1.23
VPS18-203ENST00000558855 SPANXDQ9BXN6 97 aa7.38□□□□□ -1.23
VPS18-203ENST00000558855 C5orf52A6NGY3 159 aa7.37□□□□□ -1.23
VPS18-203ENST00000558855 COX7BP24311 80 aa7.37□□□□□ -1.23
VPS18-203ENST00000558855 LINC01547P58512 204 aaPredicted RBP7.37□□□□□ -1.23
VPS18-203ENST00000558855 SMIM29Q86T20 159 aa7.37□□□□□ -1.23
VPS18-203ENST00000558855 DHRS4-AS1Q9P1J3 65 aa7.36□□□□□ -1.23
VPS18-203ENST00000558855 PCOTHQ58A44 107 aa7.35□□□□□ -1.23
VPS18-203ENST00000558855 DEFB105AQ8NG35 78 aa7.35□□□□□ -1.23
VPS18-203ENST00000558855 H7C2G1 150 aa7.34□□□□□ -1.23
VPS18-203ENST00000558855 HINT1P49773 126 aaPredicted RBP7.34□□□□□ -1.23
VPS18-203ENST00000558855 KRTDAPP60985 99 aa7.34□□□□□ -1.23
VPS18-203ENST00000558855 ATOH7Q8N100 152 aa7.34□□□□□ -1.23
VPS18-203ENST00000558855 COA6Q5JTJ3 125 aaKnown RBP7.33□□□□□ -1.24
VPS18-203ENST00000558855 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
VPS18-203ENST00000558855 MT1HP80294 61 aa7.32□□□□□ -1.24
VPS18-203ENST00000558855 LCE2DQ5TA82 110 aaPredicted RBP7.32□□□□□ -1.24
VPS18-203ENST00000558855 PCP2Q8IVA1 136 aa7.32□□□□□ -1.24
VPS18-203ENST00000558855 LAMTOR3Q9UHA4 124 aa7.32□□□□□ -1.24
VPS18-203ENST00000558855 FSIP2Q5CZC0 6907 aa7.31□□□□□ -1.24
VPS18-203ENST00000558855 TAL2Q16559 108 aa7.31□□□□□ -1.24
VPS18-203ENST00000558855 LIMD2Q9BT23 127 aa7.31□□□□□ -1.24
VPS18-203ENST00000558855 CBY1Q9Y3M2 126 aa7.31□□□□□ -1.24
VPS18-203ENST00000558855 IGLV5-48A0A075B6I7 105 aa7.3□□□□□ -1.24
VPS18-203ENST00000558855 MUSTN1Q8IVN3 82 aa7.3□□□□□ -1.24
VPS18-203ENST00000558855 LINC00518Q8N0U6 118 aa7.3□□□□□ -1.24
VPS18-203ENST00000558855 IGLV8-61A0A075B6I0 122 aa7.29□□□□□ -1.24
VPS18-203ENST00000558855 TEX49A0A1B0GTD5 131 aa7.29□□□□□ -1.24
VPS18-203ENST00000558855 C1orf195Q5TG92 126 aa7.29□□□□□ -1.24
VPS18-203ENST00000558855 SLC25A34Q6PIV7 304 aa7.29□□□□□ -1.24
VPS18-203ENST00000558855 SCGB1D4Q6XE38 83 aa7.29□□□□□ -1.24
VPS18-203ENST00000558855 PRO1933Q9H354 126 aa7.28□□□□□ -1.24
VPS18-203ENST00000558855 TRBV7-6A0A0J9YX20 115 aa7.27□□□□□ -1.25
VPS18-203ENST00000558855 CD164Q04900 197 aa7.27□□□□□ -1.25
VPS18-203ENST00000558855 A0A1B0GWB2 263 aa7.26□□□□□ -1.25
VPS18-203ENST00000558855 A6NDN8 102 aa7.26□□□□□ -1.25
VPS18-203ENST00000558855 SMIM11BQ8TCY0 68 aa7.26□□□□□ -1.25
VPS18-203ENST00000558855 IFITM1P13164 125 aa7.25□□□□□ -1.25
VPS18-203ENST00000558855 Q5XG85 94 aa7.24□□□□□ -1.25
VPS18-203ENST00000558855 AKR1D1P51857 326 aa7.23□□□□□ -1.25
VPS18-203ENST00000558855 C20orf202A1L168 122 aa7.21□□□□□ -1.26
VPS18-203ENST00000558855 RPL37P61927 97 aaKnown RBP7.21□□□□□ -1.26
VPS18-203ENST00000558855 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
VPS18-203ENST00000558855 Q6ZVH6 145 aa7.2□□□□□ -1.26
VPS18-203ENST00000558855 CRCT1Q9UGL9 99 aa7.2□□□□□ -1.26
VPS18-203ENST00000558855 KRTAP10-6P60371 365 aaPredicted RBP7.19□□□□□ -1.26
VPS18-203ENST00000558855 TRAV13-2A0A0B4J235 113 aa7.17□□□□□ -1.26
VPS18-203ENST00000558855 LINC00575Q6W349 94 aa7.17□□□□□ -1.26
VPS18-203ENST00000558855 HIST3H2BBQ8N257 126 aa7.17□□□□□ -1.26
VPS18-203ENST00000558855 A4D1N5 150 aa7.16□□□□□ -1.26
VPS18-203ENST00000558855 Q6ZQY7 126 aa7.16□□□□□ -1.26
VPS18-203ENST00000558855 COPS9Q8WXC6 57 aa7.16□□□□□ -1.26
VPS18-203ENST00000558855 HIST1H2BLQ99880 126 aa7.16□□□□□ -1.26
VPS18-203ENST00000558855 IGFL1Q6UW32 110 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms