RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 SPRR4Q96PI1 79 aa8.89□□□□□ -0.99
RPL28-206ENST00000558752 B5MCH6 92 aa8.87□□□□□ -0.99
RPL28-206ENST00000558752 SNRPEP62304 92 aaKnown RBP8.87□□□□□ -0.99
RPL28-206ENST00000558752 JOSD1Q15040 202 aaPredicted RBP8.87□□□□□ -0.99
RPL28-206ENST00000558752 SOSTDC1Q6X4U4 206 aa8.87□□□□□ -0.99
RPL28-206ENST00000558752 LINC00308Q8TCZ7 52 aa8.87□□□□□ -0.99
RPL28-206ENST00000558752 COPS9Q8WXC6 57 aa8.87□□□□□ -0.99
RPL28-206ENST00000558752 LITAFQ99732 161 aa8.87□□□□□ -0.99
RPL28-206ENST00000558752 SPANXCQ9NY87 97 aa8.87□□□□□ -0.99
RPL28-206ENST00000558752 HINT1P49773 126 aaPredicted RBP8.86□□□□□ -0.99
RPL28-206ENST00000558752 TPRXLQ17RH7 258 aa8.86□□□□□ -0.99
RPL28-206ENST00000558752 SPAG11AQ6PDA7 123 aa8.86□□□□□ -0.99
RPL28-206ENST00000558752 LINC00518Q8N0U6 118 aa8.86□□□□□ -0.99
RPL28-206ENST00000558752 IGLV7-46A0A075B6I9 117 aa8.84□□□□□ -0.99
RPL28-206ENST00000558752 TRAV23DV6A0A075B6W5 121 aa8.84□□□□□ -0.99
RPL28-206ENST00000558752 NPC2P61916 151 aa8.84□□□□□ -0.99
RPL28-206ENST00000558752 Q6ZVH6 145 aa8.84□□□□□ -0.99
RPL28-206ENST00000558752 PPDPFQ9H3Y8 114 aa8.84□□□□□ -0.99
RPL28-206ENST00000558752 C5orf52A6NGY3 159 aa8.83□□□□□ -1
RPL28-206ENST00000558752 EIF4EBP3O60516 100 aaPredicted RBP8.83□□□□□ -1
RPL28-206ENST00000558752 S100A2P29034 98 aa8.83□□□□□ -1
RPL28-206ENST00000558752 Q6ZRX8 168 aa8.83□□□□□ -1
RPL28-206ENST00000558752 RETNLBQ9BQ08 111 aa8.83□□□□□ -1
RPL28-206ENST00000558752 ZNF73O43830 326 aaPredicted RBP8.82□□□□□ -1
RPL28-206ENST00000558752 IFITM1P13164 125 aa8.82□□□□□ -1
RPL28-206ENST00000558752 LINC00483Q53H64 154 aa8.82□□□□□ -1
RPL28-206ENST00000558752 SCGB1D4Q6XE38 83 aa8.82□□□□□ -1
RPL28-206ENST00000558752 SPANXDQ9BXN6 97 aa8.82□□□□□ -1
RPL28-206ENST00000558752 S100A6P06703 90 aa8.81□□□□□ -1
RPL28-206ENST00000558752 C4orf48Q5BLP8 95 aa8.81□□□□□ -1
RPL28-206ENST00000558752 HIST3H2BBQ8N257 126 aa8.8□□□□□ -1
RPL28-206ENST00000558752 C3orf22Q8N5N4 141 aa8.8□□□□□ -1
RPL28-206ENST00000558752 OR13C6PQ8NH95 151 aa8.8□□□□□ -1
RPL28-206ENST00000558752 TTTY13Q9BZ97 58 aa8.8□□□□□ -1
RPL28-206ENST00000558752 MUC17Q685J3 4493 aa8.8□□□□□ -1
RPL28-206ENST00000558752 ANKRD39Q53RE8 183 aa8.79□□□□□ -1
RPL28-206ENST00000558752 HIST1H2BLQ99880 126 aa8.79□□□□□ -1
RPL28-206ENST00000558752 Q9BRP9 147 aa8.79□□□□□ -1
RPL28-206ENST00000558752 GAGE2AQ6NT46 116 aa8.78□□□□□ -1
RPL28-206ENST00000558752 SSBP3-AS1Q7Z2R9 100 aa8.78□□□□□ -1
RPL28-206ENST00000558752 ERC2-IT1O76042 136 aa8.77□□□□□ -1.01
RPL28-206ENST00000558752 ATOH7Q8N100 152 aa8.77□□□□□ -1.01
RPL28-206ENST00000558752 HSBP1L1C9JCN9 74 aa8.76□□□□□ -1.01
RPL28-206ENST00000558752 DHRS4-AS1Q9P1J3 65 aa8.76□□□□□ -1.01
RPL28-206ENST00000558752 SPINK1P00995 79 aa8.75□□□□□ -1.01
RPL28-206ENST00000558752 FP248Q71RG6 208 aaPredicted RBP8.74□□□□□ -1.01
RPL28-206ENST00000558752 PCP2Q8IVA1 136 aa8.74□□□□□ -1.01
RPL28-206ENST00000558752 TRBV7-6A0A0J9YX20 115 aa8.73□□□□□ -1.01
RPL28-206ENST00000558752 Q8NBF4 154 aa8.73□□□□□ -1.01
RPL28-206ENST00000558752 FSIP2Q5CZC0 6907 aa8.73□□□□□ -1.01
RPL28-206ENST00000558752 SLC25A34Q6PIV7 304 aa8.72□□□□□ -1.01
RPL28-206ENST00000558752 MUSTN1Q8IVN3 82 aa8.72□□□□□ -1.01
RPL28-206ENST00000558752 COX7BP24311 80 aa8.71□□□□□ -1.02
RPL28-206ENST00000558752 TRAV13-2A0A0B4J235 113 aa8.7□□□□□ -1.02
RPL28-206ENST00000558752 ELOF1P60002 83 aaKnown RBP8.7□□□□□ -1.02
RPL28-206ENST00000558752 RPS29P62273 56 aaKnown RBP8.7□□□□□ -1.02
RPL28-206ENST00000558752 IGLV9-49A0A0B4J1Y8 123 aa8.69□□□□□ -1.02
RPL28-206ENST00000558752 A6NDN8 102 aa8.69□□□□□ -1.02
RPL28-206ENST00000558752 SPRR1BP22528 89 aa8.69□□□□□ -1.02
RPL28-206ENST00000558752 C6orf99Q4VX62 202 aa8.69□□□□□ -1.02
RPL28-206ENST00000558752 A4D1N5 150 aa8.68□□□□□ -1.02
RPL28-206ENST00000558752 LINC01547P58512 204 aaPredicted RBP8.68□□□□□ -1.02
RPL28-206ENST00000558752 MOBPQ13875 183 aa8.68□□□□□ -1.02
RPL28-206ENST00000558752 A0A1B0GWB2 263 aa8.67□□□□□ -1.02
RPL28-206ENST00000558752 SCGB1D1O95968 90 aa8.67□□□□□ -1.02
RPL28-206ENST00000558752 ST20-AS1Q8NBB2 130 aa8.67□□□□□ -1.02
RPL28-206ENST00000558752 CRCT1Q9UGL9 99 aa8.66□□□□□ -1.02
RPL28-206ENST00000558752 LAMTOR3Q9UHA4 124 aa8.65□□□□□ -1.02
RPL28-206ENST00000558752 SEC61BP60468 96 aaKnown RBP8.64□□□□□ -1.03
RPL28-206ENST00000558752 TAL2Q16559 108 aa8.64□□□□□ -1.03
RPL28-206ENST00000558752 ASB16-AS1Q495Z4 193 aa8.64□□□□□ -1.03
RPL28-206ENST00000558752 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
RPL28-206ENST00000558752 NHP2Q9NX24 153 aaKnown RBP8.63□□□□□ -1.03
RPL28-206ENST00000558752 TEX49A0A1B0GTD5 131 aa8.62□□□□□ -1.03
RPL28-206ENST00000558752 SLC25A20O43772 301 aa8.62□□□□□ -1.03
RPL28-206ENST00000558752 VAMP3Q15836 100 aa8.62□□□□□ -1.03
RPL28-206ENST00000558752 LCE2DQ5TA82 110 aaPredicted RBP8.62□□□□□ -1.03
RPL28-206ENST00000558752 DLEU1O43261 78 aa8.61□□□□□ -1.03
RPL28-206ENST00000558752 KRTAP13-3Q3SY46 172 aa8.61□□□□□ -1.03
RPL28-206ENST00000558752 COX8AP10176 69 aa8.6□□□□□ -1.03
RPL28-206ENST00000558752 SMIM11BQ8TCY0 68 aa8.6□□□□□ -1.03
RPL28-206ENST00000558752 Q8N377 158 aa8.59□□□□□ -1.03
RPL28-206ENST00000558752 DEFB105AQ8NG35 78 aa8.58□□□□□ -1.04
RPL28-206ENST00000558752 IGLV5-48A0A075B6I7 105 aa8.57□□□□□ -1.04
RPL28-206ENST00000558752 HIST1H4GQ99525 98 aa8.57□□□□□ -1.04
RPL28-206ENST00000558752 CD164Q04900 197 aa8.56□□□□□ -1.04
RPL28-206ENST00000558752 PRO1933Q9H354 126 aa8.56□□□□□ -1.04
RPL28-206ENST00000558752 LIMD2Q9BT23 127 aa8.54□□□□□ -1.04
RPL28-206ENST00000558752 HIGD1BQ9P298 99 aa8.53□□□□□ -1.04
RPL28-206ENST00000558752 Q1RN00 199 aa8.52□□□□□ -1.05
RPL28-206ENST00000558752 LINC00575Q6W349 94 aa8.52□□□□□ -1.05
RPL28-206ENST00000558752 SMIM29Q86T20 159 aa8.52□□□□□ -1.05
RPL28-206ENST00000558752 SPATA45Q537H7 98 aa8.51□□□□□ -1.05
RPL28-206ENST00000558752 BVES-AS1Q5T3Y7 98 aa8.51□□□□□ -1.05
RPL28-206ENST00000558752 VAMP8Q9BV40 100 aa8.51□□□□□ -1.05
RPL28-206ENST00000558752 hADV29S1A0JD25 119 aa8.5□□□□□ -1.05
RPL28-206ENST00000558752 C14orf144Q96I85 54 aa8.5□□□□□ -1.05
RPL28-206ENST00000558752 PAM16Q9Y3D7 125 aa8.5□□□□□ -1.05
RPL28-206ENST00000558752 H7C2G1 150 aa8.49□□□□□ -1.05
RPL28-206ENST00000558752 Q5XG85 94 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms