RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 C9orf153Q5TBE3 101 aa8.78□□□□□ -1
TPM1-211ENST00000558314 Q9BRP9 147 aa8.78□□□□□ -1
TPM1-211ENST00000558314 TRBV10-2A0A0K0K1G8 114 aa8.77□□□□□ -1.01
TPM1-211ENST00000558314 KRTAP13-3Q3SY46 172 aa8.77□□□□□ -1.01
TPM1-211ENST00000558314 TRAV23DV6A0A075B6W5 121 aa8.76□□□□□ -1.01
TPM1-211ENST00000558314 S100A6P06703 90 aa8.76□□□□□ -1.01
TPM1-211ENST00000558314 NMUP48645 174 aa8.76□□□□□ -1.01
TPM1-211ENST00000558314 Q6ZRX8 168 aa8.76□□□□□ -1.01
TPM1-211ENST00000558314 AKR1D1P51857 326 aa8.75□□□□□ -1.01
TPM1-211ENST00000558314 LOC107984156A0A0G2JMH3 177 aa8.74□□□□□ -1.01
TPM1-211ENST00000558314 PET117Q6UWS5 81 aa8.74□□□□□ -1.01
TPM1-211ENST00000558314 ARL17AQ8IVW1 177 aa8.74□□□□□ -1.01
TPM1-211ENST00000558314 C20orf202A1L168 122 aa8.73□□□□□ -1.01
TPM1-211ENST00000558314 SYS1-DBNDD2H3BUS1 97 aa8.73□□□□□ -1.01
TPM1-211ENST00000558314 S100A2P29034 98 aa8.73□□□□□ -1.01
TPM1-211ENST00000558314 JOSD1Q15040 202 aaPredicted RBP8.73□□□□□ -1.01
TPM1-211ENST00000558314 SSBP3-AS1Q7Z2R9 100 aa8.73□□□□□ -1.01
TPM1-211ENST00000558314 ST20-AS1Q8NBB2 130 aa8.73□□□□□ -1.01
TPM1-211ENST00000558314 A0A0J9YXY3 114 aa8.72□□□□□ -1.01
TPM1-211ENST00000558314 ZNF73O43830 326 aaPredicted RBP8.72□□□□□ -1.01
TPM1-211ENST00000558314 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
TPM1-211ENST00000558314 IGLV6-57P01721 117 aa8.72□□□□□ -1.01
TPM1-211ENST00000558314 ADAMTSL4-AS1Q5T5F5 129 aa8.72□□□□□ -1.01
TPM1-211ENST00000558314 SOSTDC1Q6X4U4 206 aa8.72□□□□□ -1.01
TPM1-211ENST00000558314 NDUFC2O95298 119 aa8.71□□□□□ -1.02
TPM1-211ENST00000558314 Q8N377 158 aa8.71□□□□□ -1.02
TPM1-211ENST00000558314 OR13C6PQ8NH95 151 aa8.71□□□□□ -1.02
TPM1-211ENST00000558314 SLC25A20O43772 301 aa8.7□□□□□ -1.02
TPM1-211ENST00000558314 HINT1P49773 126 aaPredicted RBP8.7□□□□□ -1.02
TPM1-211ENST00000558314 KRTDAPP60985 99 aa8.7□□□□□ -1.02
TPM1-211ENST00000558314 SEC61BP60468 96 aaKnown RBP8.69□□□□□ -1.02
TPM1-211ENST00000558314 ASB16-AS1Q495Z4 193 aa8.69□□□□□ -1.02
TPM1-211ENST00000558314 LINC01545Q5VT33 79 aa8.69□□□□□ -1.02
TPM1-211ENST00000558314 E9PLD3 99 aa8.68□□□□□ -1.02
TPM1-211ENST00000558314 C3orf79P0CE67 100 aa8.68□□□□□ -1.02
TPM1-211ENST00000558314 HRCT1Q6UXD1 115 aa8.68□□□□□ -1.02
TPM1-211ENST00000558314 RPS29P62273 56 aaKnown RBP8.66□□□□□ -1.02
TPM1-211ENST00000558314 HIST3H2BBQ8N257 126 aa8.66□□□□□ -1.02
TPM1-211ENST00000558314 LINC01547P58512 204 aaPredicted RBP8.65□□□□□ -1.02
TPM1-211ENST00000558314 LINC00308Q8TCZ7 52 aa8.65□□□□□ -1.02
TPM1-211ENST00000558314 KRTAP4-1Q9BYQ7 146 aa8.65□□□□□ -1.02
TPM1-211ENST00000558314 HIST1H2BLQ99880 126 aa8.64□□□□□ -1.03
TPM1-211ENST00000558314 CBY1Q9Y3M2 126 aa8.64□□□□□ -1.03
TPM1-211ENST00000558314 SPANXCQ9NY87 97 aa8.63□□□□□ -1.03
TPM1-211ENST00000558314 ZNF815PA8K554 130 aa8.62□□□□□ -1.03
TPM1-211ENST00000558314 SNRPEP62304 92 aaKnown RBP8.62□□□□□ -1.03
TPM1-211ENST00000558314 TTTY13Q9BZ97 58 aa8.62□□□□□ -1.03
TPM1-211ENST00000558314 DEFB105AQ8NG35 78 aa8.61□□□□□ -1.03
TPM1-211ENST00000558314 C5orf52A6NGY3 159 aa8.6□□□□□ -1.03
TPM1-211ENST00000558314 XP32Q5T750 250 aa8.6□□□□□ -1.03
TPM1-211ENST00000558314 LITAFQ99732 161 aa8.6□□□□□ -1.03
TPM1-211ENST00000558314 DHRS4-AS1Q9P1J3 65 aa8.6□□□□□ -1.03
TPM1-211ENST00000558314 LAMTOR3Q9UHA4 124 aa8.6□□□□□ -1.03
TPM1-211ENST00000558314 COX7BP24311 80 aa8.59□□□□□ -1.03
TPM1-211ENST00000558314 SLC25A34Q6PIV7 304 aa8.59□□□□□ -1.03
TPM1-211ENST00000558314 SPANXDQ9BXN6 97 aa8.59□□□□□ -1.03
TPM1-211ENST00000558314 C9orf92A6NGG3 77 aa8.58□□□□□ -1.04
TPM1-211ENST00000558314 TAL2Q16559 108 aa8.58□□□□□ -1.04
TPM1-211ENST00000558314 Q1RN00 199 aa8.58□□□□□ -1.04
TPM1-211ENST00000558314 LIMD2Q9BT23 127 aa8.58□□□□□ -1.04
TPM1-211ENST00000558314 HSBP1L1C9JCN9 74 aa8.57□□□□□ -1.04
TPM1-211ENST00000558314 TIMM17BO60830 172 aa8.57□□□□□ -1.04
TPM1-211ENST00000558314 C6orf99Q4VX62 202 aa8.57□□□□□ -1.04
TPM1-211ENST00000558314 KRTAP9-6A0A140TA67 174 aa8.56□□□□□ -1.04
TPM1-211ENST00000558314 H7C2G1 150 aa8.55□□□□□ -1.04
TPM1-211ENST00000558314 SPRR1BP22528 89 aa8.55□□□□□ -1.04
TPM1-211ENST00000558314 SCGB1D4Q6XE38 83 aa8.55□□□□□ -1.04
TPM1-211ENST00000558314 ELOF1P60002 83 aaKnown RBP8.54□□□□□ -1.04
TPM1-211ENST00000558314 LINC00518Q8N0U6 118 aa8.54□□□□□ -1.04
TPM1-211ENST00000558314 SCGB1D1O95968 90 aa8.53□□□□□ -1.04
TPM1-211ENST00000558314 ATOH7Q8N100 152 aa8.53□□□□□ -1.04
TPM1-211ENST00000558314 A6NDN8 102 aa8.52□□□□□ -1.05
TPM1-211ENST00000558314 PCOTHQ58A44 107 aa8.52□□□□□ -1.05
TPM1-211ENST00000558314 COPS9Q8WXC6 57 aa8.51□□□□□ -1.05
TPM1-211ENST00000558314 IGLV8-61A0A075B6I0 122 aa8.5□□□□□ -1.05
TPM1-211ENST00000558314 TEX49A0A1B0GTD5 131 aa8.5□□□□□ -1.05
TPM1-211ENST00000558314 PRO1933Q9H354 126 aa8.5□□□□□ -1.05
TPM1-211ENST00000558314 ANKRD39Q53RE8 183 aa8.49□□□□□ -1.05
TPM1-211ENST00000558314 A0A0G2JQZ4 141 aa8.48□□□□□ -1.05
TPM1-211ENST00000558314 TMA7Q9Y2S6 64 aaKnown RBP8.48□□□□□ -1.05
TPM1-211ENST00000558314 A0A1B0GWB2 263 aa8.46□□□□□ -1.06
TPM1-211ENST00000558314 Q6ZVH6 145 aa8.46□□□□□ -1.06
TPM1-211ENST00000558314 MUSTN1Q8IVN3 82 aa8.46□□□□□ -1.06
TPM1-211ENST00000558314 IFITM1P13164 125 aa8.44□□□□□ -1.06
TPM1-211ENST00000558314 TRBV7-6A0A0J9YX20 115 aa8.43□□□□□ -1.06
TPM1-211ENST00000558314 CD164Q04900 197 aa8.43□□□□□ -1.06
TPM1-211ENST00000558314 SMIM29Q86T20 159 aa8.43□□□□□ -1.06
TPM1-211ENST00000558314 PCP2Q8IVA1 136 aa8.43□□□□□ -1.06
TPM1-211ENST00000558314 VAMP8Q9BV40 100 aa8.42□□□□□ -1.06
TPM1-211ENST00000558314 LCE2CQ5TA81 110 aa8.4□□□□□ -1.06
TPM1-211ENST00000558314 C1orf195Q5TG92 126 aa8.4□□□□□ -1.06
TPM1-211ENST00000558314 TRAV13-2A0A0B4J235 113 aa8.39□□□□□ -1.07
TPM1-211ENST00000558314 SMIM11BQ8TCY0 68 aa8.39□□□□□ -1.07
TPM1-211ENST00000558314 NHP2Q9NX24 153 aaKnown RBP8.39□□□□□ -1.07
TPM1-211ENST00000558314 IGLV5-48A0A075B6I7 105 aa8.38□□□□□ -1.07
TPM1-211ENST00000558314 F8WEM9 126 aa8.38□□□□□ -1.07
TPM1-211ENST00000558314 DLEU1O43261 78 aa8.38□□□□□ -1.07
TPM1-211ENST00000558314 COX8AP10176 69 aa8.38□□□□□ -1.07
TPM1-211ENST00000558314 A4D1N5 150 aa8.37□□□□□ -1.07
TPM1-211ENST00000558314 SPATA45Q537H7 98 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms