RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 SLPIP03973 132 aa5.52□□□□□ -1.53
SPG11-209ENST00000558253 VPREB1P12018 145 aa5.52□□□□□ -1.53
SPG11-209ENST00000558253 RBM3P98179 157 aaKnown RBP5.52□□□□□ -1.53
SPG11-209ENST00000558253 C15orf56Q8N910 161 aa5.52□□□□□ -1.53
SPG11-209ENST00000558253 CUBNO60494 3623 aa5.52□□□□□ -1.53
SPG11-209ENST00000558253 IGKV2D-24A0A075B6R9 120 aa5.51□□□□□ -1.53
SPG11-209ENST00000558253 ATP5EP56381 51 aaPredicted RBP5.51□□□□□ -1.53
SPG11-209ENST00000558253 ELOF1P60002 83 aaKnown RBP5.51□□□□□ -1.53
SPG11-209ENST00000558253 Q6ZRU5 148 aa5.51□□□□□ -1.53
SPG11-209ENST00000558253 UPK3BQ9BT76 320 aa5.51□□□□□ -1.53
SPG11-209ENST00000558253 TEP1Q99973 2627 aaKnown RBP5.5□□□□□ -1.53
SPG11-209ENST00000558253 USP17L23D6RBM5 183 aa5.5□□□□□ -1.53
SPG11-209ENST00000558253 HIGD2BQ4VC39 106 aa5.5□□□□□ -1.53
SPG11-209ENST00000558253 Q8NDZ9 215 aa5.5□□□□□ -1.53
SPG11-209ENST00000558253 DSCR8Q96T75 97 aa5.5□□□□□ -1.53
SPG11-209ENST00000558253 UBL5Q9BZL1 73 aa5.5□□□□□ -1.53
SPG11-209ENST00000558253 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
SPG11-209ENST00000558253 SERP1Q9Y6X1 66 aa5.5□□□□□ -1.53
SPG11-209ENST00000558253 KRTAP9-3Q9BYQ3 159 aa5.49□□□□□ -1.53
SPG11-209ENST00000558253 XAGE1AQ9HD64 81 aa5.49□□□□□ -1.53
SPG11-209ENST00000558253 LINC00846Q9NV44 126 aa5.49□□□□□ -1.53
SPG11-209ENST00000558253 LAMTOR3Q9UHA4 124 aa5.49□□□□□ -1.53
SPG11-209ENST00000558253 VWFP04275 2813 aa5.49□□□□□ -1.53
SPG11-209ENST00000558253 IGLV5-37A0A075B6J1 123 aa5.48□□□□□ -1.53
SPG11-209ENST00000558253 NDUFC1O43677 76 aa5.48□□□□□ -1.53
SPG11-209ENST00000558253 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
SPG11-209ENST00000558253 NKAPP1Q8N9T2 125 aa5.48□□□□□ -1.53
SPG11-209ENST00000558253 KCNQ1DNQ9H478 68 aa5.48□□□□□ -1.53
SPG11-209ENST00000558253 NBEAL2Q6ZNJ1 2754 aa5.47□□□□□ -1.53
SPG11-209ENST00000558253 FAM236DA0A1B0GTK5 79 aa5.47□□□□□ -1.53
SPG11-209ENST00000558253 A0A1B0GW54 56 aa5.47□□□□□ -1.53
SPG11-209ENST00000558253 EPM2AB3EWF7 344 aa5.47□□□□□ -1.53
SPG11-209ENST00000558253 FAM236CP0DP71 79 aa5.47□□□□□ -1.53
SPG11-209ENST00000558253 Q6ZQT0 140 aa5.47□□□□□ -1.53
SPG11-209ENST00000558253 Q6ZQY7 126 aa5.47□□□□□ -1.53
SPG11-209ENST00000558253 LINC00588Q9Y4M8 146 aa5.47□□□□□ -1.53
SPG11-209ENST00000558253 SMIM26A0A096LP01 95 aa5.46□□□□□ -1.54
SPG11-209ENST00000558253 DHRS4-AS1Q9P1J3 65 aa5.46□□□□□ -1.54
SPG11-209ENST00000558253 PKIGQ9Y2B9 76 aa5.46□□□□□ -1.54
SPG11-209ENST00000558253 ATRQ13535 2644 aa5.45□□□□□ -1.54
SPG11-209ENST00000558253 TENM1Q9UKZ4 2725 aa5.45□□□□□ -1.54
SPG11-209ENST00000558253 PRYO14603 147 aa5.45□□□□□ -1.54
SPG11-209ENST00000558253 Q5XG85 94 aa5.45□□□□□ -1.54
SPG11-209ENST00000558253 Q6ZRP5 223 aa5.45□□□□□ -1.54
SPG11-209ENST00000558253 TRAV7A0A075B6U4 112 aa5.44□□□□□ -1.54
SPG11-209ENST00000558253 K7EIL1 84 aa5.44□□□□□ -1.54
SPG11-209ENST00000558253 CXCL6P80162 114 aa5.44□□□□□ -1.54
SPG11-209ENST00000558253 TRBV7-4A0A0J9YYF1 115 aa5.43□□□□□ -1.54
SPG11-209ENST00000558253 C14orf177Q52M58 125 aa5.43□□□□□ -1.54
SPG11-209ENST00000558253 KLKP1Q107X0 134 aa5.42□□□□□ -1.54
SPG11-209ENST00000558253 IGKV3D-7A0A0C4DH55 119 aa5.41□□□□□ -1.54
SPG11-209ENST00000558253 SPRR1AP35321 89 aa5.41□□□□□ -1.54
SPG11-209ENST00000558253 HRCT1Q6UXD1 115 aa5.41□□□□□ -1.54
SPG11-209ENST00000558253 C7orf33Q8WU49 177 aa5.41□□□□□ -1.54
SPG11-209ENST00000558253 IGLV1-50A0A075B6I6 118 aa5.4□□□□□ -1.54
SPG11-209ENST00000558253 CNBPP62633 177 aaKnown RBP5.4□□□□□ -1.54
SPG11-209ENST00000558253 C4orf26Q17RF5 130 aa5.4□□□□□ -1.54
SPG11-209ENST00000558253 ETDCA0A1B0GVM5 59 aa5.39□□□□□ -1.55
SPG11-209ENST00000558253 Q6ZRX8 168 aa5.39□□□□□ -1.55
SPG11-209ENST00000558253 Q6ZVQ6 151 aa5.39□□□□□ -1.55
SPG11-209ENST00000558253 F8P00451 2351 aa5.39□□□□□ -1.55
SPG11-209ENST00000558253 IGLV5-48A0A075B6I7 105 aa5.38□□□□□ -1.55
SPG11-209ENST00000558253 ERC2-IT1O76042 136 aa5.38□□□□□ -1.55
SPG11-209ENST00000558253 LINC01547P58512 204 aaPredicted RBP5.38□□□□□ -1.55
SPG11-209ENST00000558253 MRPL55Q7Z7F7 128 aaKnown RBP5.38□□□□□ -1.55
SPG11-209ENST00000558253 B9D2Q9BPU9 175 aa5.38□□□□□ -1.55
SPG11-209ENST00000558253 KRTAP4-16G5E9R7 235 aaPredicted RBP5.37□□□□□ -1.55
SPG11-209ENST00000558253 OXTP01178 125 aa5.37□□□□□ -1.55
SPG11-209ENST00000558253 SERTAD4-AS1Q5TG53 156 aa5.37□□□□□ -1.55
SPG11-209ENST00000558253 C16orf90A8MZG2 172 aa5.36□□□□□ -1.55
SPG11-209ENST00000558253 H7BZZ5 65 aa5.36□□□□□ -1.55
SPG11-209ENST00000558253 HAMPP81172 84 aa5.36□□□□□ -1.55
SPG11-209ENST00000558253 UBE2DNLQ8IWF7 75 aa5.36□□□□□ -1.55
SPG11-209ENST00000558253 C20orf197Q8N268 126 aa5.36□□□□□ -1.55
SPG11-209ENST00000558253 A0A087WVE0 104 aa5.35□□□□□ -1.55
SPG11-209ENST00000558253 NUPR2A6NF83 97 aa5.35□□□□□ -1.55
SPG11-209ENST00000558253 RPL37AP8A6NKH3 93 aa5.35□□□□□ -1.55
SPG11-209ENST00000558253 PSCAO43653 123 aa5.35□□□□□ -1.55
SPG11-209ENST00000558253 FUSP35637 526 aaKnown RBP eCLIP5.35□□□□□ -1.55
SPG11-209ENST00000558253 CYSTM1Q9H1C7 97 aa5.35□□□□□ -1.55
SPG11-209ENST00000558253 LINC00474Q9P2X8 69 aa5.35□□□□□ -1.55
SPG11-209ENST00000558253 APLNQ9ULZ1 77 aa5.35□□□□□ -1.55
SPG11-209ENST00000558253 FBN1P35555 2871 aaKnown RBP5.34□□□□□ -1.55
SPG11-209ENST00000558253 PRB2P02812 416 aaPredicted RBP5.34□□□□□ -1.55
SPG11-209ENST00000558253 KRTAP10-2P60368 255 aa5.34□□□□□ -1.55
SPG11-209ENST00000558253 NREPQ16612 68 aa5.34□□□□□ -1.55
SPG11-209ENST00000558253 REG3GQ6UW15 175 aa5.34□□□□□ -1.55
SPG11-209ENST00000558253 Q8N377 158 aa5.34□□□□□ -1.55
SPG11-209ENST00000558253 H0Y9J4 135 aa5.33□□□□□ -1.56
SPG11-209ENST00000558253 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
SPG11-209ENST00000558253 V9GYY9 64 aa5.33□□□□□ -1.56
SPG11-209ENST00000558253 CASC10Q5T4H9 136 aa5.32□□□□□ -1.56
SPG11-209ENST00000558253 FAM19A1Q7Z5A9 133 aa5.32□□□□□ -1.56
SPG11-209ENST00000558253 F8WEM9 126 aa5.31□□□□□ -1.56
SPG11-209ENST00000558253 LINC00336Q6ZUF6 198 aa5.31□□□□□ -1.56
SPG11-209ENST00000558253 DEFB105AQ8NG35 78 aa5.31□□□□□ -1.56
SPG11-209ENST00000558253 WWC2-AS2Q96NR7 200 aa5.31□□□□□ -1.56
SPG11-209ENST00000558253 Q9BRP9 147 aa5.31□□□□□ -1.56
SPG11-209ENST00000558253 FAM168BA1KXE4 195 aa5.3□□□□□ -1.56
SPG11-209ENST00000558253 BPY2O14599 106 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms