RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 KRTAP4-16G5E9R7 235 aaPredicted RBP5.89□□□□□ -1.47
USP3-207ENST00000558218 LGALS3P17931 250 aaKnown RBP5.89□□□□□ -1.47
USP3-207ENST00000558218 HIGD2AQ9BW72 106 aa5.89□□□□□ -1.47
USP3-207ENST00000558218 NDUFC2O95298 119 aa5.88□□□□□ -1.47
USP3-207ENST00000558218 SPRR4Q96PI1 79 aa5.88□□□□□ -1.47
USP3-207ENST00000558218 TRBV10-3A0A0K0K1G6 114 aa5.87□□□□□ -1.47
USP3-207ENST00000558218 ETDCA0A1B0GVM5 59 aa5.87□□□□□ -1.47
USP3-207ENST00000558218 TSPEAR-AS2P59090 65 aa5.87□□□□□ -1.47
USP3-207ENST00000558218 MIEN1Q9BRT3 115 aa5.87□□□□□ -1.47
USP3-207ENST00000558218 E9PLD3 99 aa5.86□□□□□ -1.47
USP3-207ENST00000558218 NCR3O14931 201 aa5.86□□□□□ -1.47
USP3-207ENST00000558218 SMCR5Q8TEV8 140 aa5.86□□□□□ -1.47
USP3-207ENST00000558218 SPANXB1Q9NS25 103 aaPredicted RBP5.86□□□□□ -1.47
USP3-207ENST00000558218 CBY1Q9Y3M2 126 aa5.86□□□□□ -1.47
USP3-207ENST00000558218 SYS1-DBNDD2H3BUS1 97 aa5.85□□□□□ -1.47
USP3-207ENST00000558218 HIST1H2BKO60814 126 aa5.85□□□□□ -1.47
USP3-207ENST00000558218 HIST1H2BJP06899 126 aa5.85□□□□□ -1.47
USP3-207ENST00000558218 HIST1H2BOP23527 126 aa5.85□□□□□ -1.47
USP3-207ENST00000558218 DDTP30046 118 aa5.85□□□□□ -1.47
USP3-207ENST00000558218 HIST1H2BBP33778 126 aa5.85□□□□□ -1.47
USP3-207ENST00000558218 HIST1H2BDP58876 126 aa5.85□□□□□ -1.47
USP3-207ENST00000558218 HIST1H2BCP62807 126 aa5.85□□□□□ -1.47
USP3-207ENST00000558218 HIST2H2BEQ16778 126 aa5.85□□□□□ -1.47
USP3-207ENST00000558218 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.85□□□□□ -1.47
USP3-207ENST00000558218 HIST1H2BHQ93079 126 aa5.85□□□□□ -1.47
USP3-207ENST00000558218 HIST1H2BNQ99877 126 aa5.85□□□□□ -1.47
USP3-207ENST00000558218 HIST1H2BMQ99879 126 aa5.85□□□□□ -1.47
USP3-207ENST00000558218 IGLV6-57P01721 117 aa5.84□□□□□ -1.47
USP3-207ENST00000558218 LINC00483Q53H64 154 aa5.84□□□□□ -1.47
USP3-207ENST00000558218 PET117Q6UWS5 81 aa5.84□□□□□ -1.47
USP3-207ENST00000558218 DAND5Q8N907 189 aa5.84□□□□□ -1.47
USP3-207ENST00000558218 PMCHL2Q9BQD1 86 aa5.84□□□□□ -1.47
USP3-207ENST00000558218 A0A0J9YXY3 114 aa5.83□□□□□ -1.48
USP3-207ENST00000558218 C5orf52A6NGY3 159 aa5.83□□□□□ -1.48
USP3-207ENST00000558218 TIMM17BO60830 172 aa5.83□□□□□ -1.48
USP3-207ENST00000558218 JOSD1Q15040 202 aaPredicted RBP5.83□□□□□ -1.48
USP3-207ENST00000558218 S100A7L2Q5SY68 101 aa5.83□□□□□ -1.48
USP3-207ENST00000558218 LINC01545Q5VT33 79 aa5.83□□□□□ -1.48
USP3-207ENST00000558218 TPRXLQ17RH7 258 aa5.82□□□□□ -1.48
USP3-207ENST00000558218 COA6Q5JTJ3 125 aaKnown RBP5.82□□□□□ -1.48
USP3-207ENST00000558218 Q6ZRX8 168 aa5.82□□□□□ -1.48
USP3-207ENST00000558218 SSBP3-AS1Q7Z2R9 100 aa5.82□□□□□ -1.48
USP3-207ENST00000558218 C3orf22Q8N5N4 141 aa5.82□□□□□ -1.48
USP3-207ENST00000558218 SPINK1P00995 79 aa5.81□□□□□ -1.48
USP3-207ENST00000558218 ADAMTSL4-AS1Q5T5F5 129 aa5.81□□□□□ -1.48
USP3-207ENST00000558218 LPAP08519 4548 aa5.8□□□□□ -1.48
USP3-207ENST00000558218 IGLV7-46A0A075B6I9 117 aa5.8□□□□□ -1.48
USP3-207ENST00000558218 HINT1P49773 126 aaPredicted RBP5.8□□□□□ -1.48
USP3-207ENST00000558218 AKR1D1P51857 326 aa5.8□□□□□ -1.48
USP3-207ENST00000558218 FP248Q71RG6 208 aaPredicted RBP5.8□□□□□ -1.48
USP3-207ENST00000558218 TRAV23DV6A0A075B6W5 121 aa5.79□□□□□ -1.48
USP3-207ENST00000558218 ZNF73O43830 326 aaPredicted RBP5.79□□□□□ -1.48
USP3-207ENST00000558218 RPS29P62273 56 aaKnown RBP5.79□□□□□ -1.48
USP3-207ENST00000558218 GAGE2AQ6NT46 116 aa5.79□□□□□ -1.48
USP3-207ENST00000558218 SOSTDC1Q6X4U4 206 aa5.79□□□□□ -1.48
USP3-207ENST00000558218 LINC00518Q8N0U6 118 aa5.79□□□□□ -1.48
USP3-207ENST00000558218 SPANXCQ9NY87 97 aa5.79□□□□□ -1.48
USP3-207ENST00000558218 A0A0U1RQV1 116 aa5.78□□□□□ -1.48
USP3-207ENST00000558218 Q8NBF4 154 aa5.78□□□□□ -1.48
USP3-207ENST00000558218 LINC00308Q8TCZ7 52 aa5.78□□□□□ -1.48
USP3-207ENST00000558218 LITAFQ99732 161 aa5.78□□□□□ -1.48
USP3-207ENST00000558218 RETNLBQ9BQ08 111 aa5.78□□□□□ -1.48
USP3-207ENST00000558218 Q9BRP9 147 aa5.78□□□□□ -1.48
USP3-207ENST00000558218 PPDPFQ9H3Y8 114 aa5.78□□□□□ -1.48
USP3-207ENST00000558218 ERC2-IT1O76042 136 aa5.77□□□□□ -1.49
USP3-207ENST00000558218 C3orf79P0CE67 100 aa5.77□□□□□ -1.49
USP3-207ENST00000558218 C20orf202A1L168 122 aa5.76□□□□□ -1.49
USP3-207ENST00000558218 ZNF815PA8K554 130 aa5.76□□□□□ -1.49
USP3-207ENST00000558218 COPS9Q8WXC6 57 aa5.76□□□□□ -1.49
USP3-207ENST00000558218 SPANXDQ9BXN6 97 aa5.76□□□□□ -1.49
USP3-207ENST00000558218 NPC2P61916 151 aa5.75□□□□□ -1.49
USP3-207ENST00000558218 Q6ZVH6 145 aa5.75□□□□□ -1.49
USP3-207ENST00000558218 DHRS4-AS1Q9P1J3 65 aa5.75□□□□□ -1.49
USP3-207ENST00000558218 KRTDAPP60985 99 aa5.74□□□□□ -1.49
USP3-207ENST00000558218 SNRPEP62304 92 aaKnown RBP5.74□□□□□ -1.49
USP3-207ENST00000558218 SLC25A34Q6PIV7 304 aa5.74□□□□□ -1.49
USP3-207ENST00000558218 OR13C6PQ8NH95 151 aa5.74□□□□□ -1.49
USP3-207ENST00000558218 IGLV9-49A0A0B4J1Y8 123 aa5.73□□□□□ -1.49
USP3-207ENST00000558218 TRBV7-6A0A0J9YX20 115 aa5.73□□□□□ -1.49
USP3-207ENST00000558218 SLC25A20O43772 301 aa5.73□□□□□ -1.49
USP3-207ENST00000558218 IFITM1P13164 125 aa5.73□□□□□ -1.49
USP3-207ENST00000558218 SPRR1BP22528 89 aa5.73□□□□□ -1.49
USP3-207ENST00000558218 MOBPQ13875 183 aa5.73□□□□□ -1.49
USP3-207ENST00000558218 SCGB1D4Q6XE38 83 aa5.72□□□□□ -1.49
USP3-207ENST00000558218 COX7BP24311 80 aa5.7□□□□□ -1.5
USP3-207ENST00000558218 ELOF1P60002 83 aaKnown RBP5.7□□□□□ -1.5
USP3-207ENST00000558218 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
USP3-207ENST00000558218 Q8N377 158 aa5.7□□□□□ -1.5
USP3-207ENST00000558218 TTTY13Q9BZ97 58 aa5.7□□□□□ -1.5
USP3-207ENST00000558218 ST20-AS1Q8NBB2 130 aa5.69□□□□□ -1.5
USP3-207ENST00000558218 LAMTOR3Q9UHA4 124 aa5.69□□□□□ -1.5
USP3-207ENST00000558218 A4D1N5 150 aa5.68□□□□□ -1.5
USP3-207ENST00000558218 C6orf99Q4VX62 202 aa5.68□□□□□ -1.5
USP3-207ENST00000558218 C9orf153Q5TBE3 101 aa5.68□□□□□ -1.5
USP3-207ENST00000558218 A0A1B0GWB2 263 aa5.67□□□□□ -1.5
USP3-207ENST00000558218 S100A1P23297 94 aa5.67□□□□□ -1.5
USP3-207ENST00000558218 TRAV13-2A0A0B4J235 113 aa5.66□□□□□ -1.5
USP3-207ENST00000558218 TEX49A0A1B0GTD5 131 aa5.66□□□□□ -1.5
USP3-207ENST00000558218 CD164Q04900 197 aa5.66□□□□□ -1.5
USP3-207ENST00000558218 TAL2Q16559 108 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms