RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 CNBPP62633 177 aaKnown RBP4.73□□□□□ -1.65
SPG11-204ENST00000557866 KRTAP7-1Q8IUC3 87 aa4.73□□□□□ -1.65
SPG11-204ENST00000557866 LINC01600Q96MT4 127 aa4.73□□□□□ -1.65
SPG11-204ENST00000557866 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.72□□□□□ -1.65
SPG11-204ENST00000557866 A0A087WYN8 130 aa4.72□□□□□ -1.65
SPG11-204ENST00000557866 LOC107984640A0A0U1RRK4 108 aa4.72□□□□□ -1.65
SPG11-204ENST00000557866 FAM168BA1KXE4 195 aa4.72□□□□□ -1.65
SPG11-204ENST00000557866 M0R378 163 aa4.72□□□□□ -1.65
SPG11-204ENST00000557866 SLC25A20O43772 301 aa4.72□□□□□ -1.65
SPG11-204ENST00000557866 GAGE2BQ13066 116 aa4.72□□□□□ -1.65
SPG11-204ENST00000557866 ETDBQ3ZM63 59 aa4.72□□□□□ -1.65
SPG11-204ENST00000557866 S100A7L2Q5SY68 101 aa4.72□□□□□ -1.65
SPG11-204ENST00000557866 FRAS1Q86XX4 4008 aa4.71□□□□□ -1.66
SPG11-204ENST00000557866 IGLV5-37A0A075B6J1 123 aa4.71□□□□□ -1.66
SPG11-204ENST00000557866 H0YGX0 51 aa4.71□□□□□ -1.66
SPG11-204ENST00000557866 M0QXV9 152 aa4.71□□□□□ -1.66
SPG11-204ENST00000557866 TRACP01848 142 aa4.71□□□□□ -1.66
SPG11-204ENST00000557866 C6orf99Q4VX62 202 aa4.71□□□□□ -1.66
SPG11-204ENST00000557866 C14orf177Q52M58 125 aa4.71□□□□□ -1.66
SPG11-204ENST00000557866 OCIAD2Q56VL3 154 aa4.71□□□□□ -1.66
SPG11-204ENST00000557866 ANKRD29Q8N6D5 301 aa4.71□□□□□ -1.66
SPG11-204ENST00000557866 C22orf24Q9Y442 160 aa4.71□□□□□ -1.66
SPG11-204ENST00000557866 DNAH11Q96DT5 4516 aa4.71□□□□□ -1.66
SPG11-204ENST00000557866 TGP01266 2768 aa4.7□□□□□ -1.66
SPG11-204ENST00000557866 A0A087WTM6 91 aa4.7□□□□□ -1.66
SPG11-204ENST00000557866 LY6G6CO95867 125 aa4.7□□□□□ -1.66
SPG11-204ENST00000557866 C7orf33Q8WU49 177 aa4.7□□□□□ -1.66
SPG11-204ENST00000557866 TRAV23DV6A0A075B6W5 121 aa4.69□□□□□ -1.66
SPG11-204ENST00000557866 A0A096LNI7 61 aa4.69□□□□□ -1.66
SPG11-204ENST00000557866 A0A1W2PNN7 141 aa4.69□□□□□ -1.66
SPG11-204ENST00000557866 Q8N814 137 aa4.69□□□□□ -1.66
SPG11-204ENST00000557866 LINC00167Q96N53 147 aa4.69□□□□□ -1.66
SPG11-204ENST00000557866 SACSQ9NZJ4 4579 aa4.69□□□□□ -1.66
SPG11-204ENST00000557866 C16orf90A8MZG2 172 aa4.68□□□□□ -1.66
SPG11-204ENST00000557866 C3orf84H3BNL1 204 aa4.68□□□□□ -1.66
SPG11-204ENST00000557866 H3BT86 120 aa4.68□□□□□ -1.66
SPG11-204ENST00000557866 BAALC-AS2P0C853 105 aa4.68□□□□□ -1.66
SPG11-204ENST00000557866 CHTF8P0CG12 524 aa4.68□□□□□ -1.66
SPG11-204ENST00000557866 FUSP35637 526 aaKnown RBP eCLIP4.68□□□□□ -1.66
SPG11-204ENST00000557866 LINC00575Q6W349 94 aa4.68□□□□□ -1.66
SPG11-204ENST00000557866 TEN1Q86WV5 123 aa4.68□□□□□ -1.66
SPG11-204ENST00000557866 C9orf163Q8N9P6 203 aa4.68□□□□□ -1.66
SPG11-204ENST00000557866 HYDINQ4G0P3 5121 aa4.67□□□□□ -1.66
SPG11-204ENST00000557866 IGKV2-24A0A0C4DH68 120 aa4.67□□□□□ -1.66
SPG11-204ENST00000557866 ZNF73O43830 326 aaPredicted RBP4.67□□□□□ -1.66
SPG11-204ENST00000557866 C1orf134Q5TEV5 83 aa4.67□□□□□ -1.66
SPG11-204ENST00000557866 SDIM1Q6ZPB5 146 aa4.67□□□□□ -1.66
SPG11-204ENST00000557866 FAM19A5Q7Z5A7 132 aaPredicted RBP4.67□□□□□ -1.66
SPG11-204ENST00000557866 NKAPP1Q8N9T2 125 aa4.67□□□□□ -1.66
SPG11-204ENST00000557866 DIRC1Q969H9 104 aa4.67□□□□□ -1.66
SPG11-204ENST00000557866 KCNQ1DNQ9H478 68 aa4.67□□□□□ -1.66
SPG11-204ENST00000557866 FAT2Q9NYQ8 4349 aa4.67□□□□□ -1.66
SPG11-204ENST00000557866 IGLV1-50A0A075B6I6 118 aa4.66□□□□□ -1.66
SPG11-204ENST00000557866 TRBV7-6A0A0J9YX20 115 aa4.66□□□□□ -1.66
SPG11-204ENST00000557866 A0A1B0GX51 115 aa4.66□□□□□ -1.66
SPG11-204ENST00000557866 PANO1I0J062 215 aa4.66□□□□□ -1.66
SPG11-204ENST00000557866 PPDPFLQ8WWR9 84 aa4.66□□□□□ -1.66
SPG11-204ENST00000557866 DNAH5Q8TE73 4624 aa4.66□□□□□ -1.66
SPG11-204ENST00000557866 DNAH8Q96JB1 4490 aa4.66□□□□□ -1.66
SPG11-204ENST00000557866 TEX49A0A1B0GTD5 131 aa4.65□□□□□ -1.67
SPG11-204ENST00000557866 RPL37AP8A6NKH3 93 aa4.65□□□□□ -1.67
SPG11-204ENST00000557866 KRTAP4-16G5E9R7 235 aaPredicted RBP4.65□□□□□ -1.67
SPG11-204ENST00000557866 COX7BP24311 80 aa4.65□□□□□ -1.67
SPG11-204ENST00000557866 ELOF1P60002 83 aaKnown RBP4.65□□□□□ -1.67
SPG11-204ENST00000557866 MRPL55Q7Z7F7 128 aaKnown RBP4.65□□□□□ -1.67
SPG11-204ENST00000557866 hADV29S1A0JD25 119 aa4.64□□□□□ -1.67
SPG11-204ENST00000557866 K7ERU9 68 aa4.64□□□□□ -1.67
SPG11-204ENST00000557866 RTL8CO15255 209 aa4.64□□□□□ -1.67
SPG11-204ENST00000557866 DNAL4O96015 105 aa4.64□□□□□ -1.67
SPG11-204ENST00000557866 SPRR1AP35321 89 aa4.64□□□□□ -1.67
SPG11-204ENST00000557866 EPM2AB3EWF7 344 aa4.63□□□□□ -1.67
SPG11-204ENST00000557866 PRYO14603 147 aa4.63□□□□□ -1.67
SPG11-204ENST00000557866 KRTAP11-1Q8IUC1 163 aa4.63□□□□□ -1.67
SPG11-204ENST00000557866 ORMDL1Q9P0S3 153 aa4.63□□□□□ -1.67
SPG11-204ENST00000557866 CBY1Q9Y3M2 126 aa4.63□□□□□ -1.67
SPG11-204ENST00000557866 PHF5AQ7RTV0 110 aaKnown RBP4.62□□□□□ -1.67
SPG11-204ENST00000557866 OBSCN-AS1Q96MR7 158 aa4.62□□□□□ -1.67
SPG11-204ENST00000557866 Q6ZQY7 126 aa4.61□□□□□ -1.67
SPG11-204ENST00000557866 SPACA4Q8TDM5 124 aa4.61□□□□□ -1.67
SPG11-204ENST00000557866 Q9BRP9 147 aa4.61□□□□□ -1.67
SPG11-204ENST00000557866 PKIGQ9Y2B9 76 aa4.61□□□□□ -1.67
SPG11-204ENST00000557866 PKD1P98161 4303 aa4.6□□□□□ -1.67
SPG11-204ENST00000557866 IGLV5-52A0A0A0MRZ9 124 aa4.6□□□□□ -1.67
SPG11-204ENST00000557866 J3QR89 54 aa4.6□□□□□ -1.67
SPG11-204ENST00000557866 INAFM2P0DMQ5 153 aa4.6□□□□□ -1.67
SPG11-204ENST00000557866 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.6□□□□□ -1.67
SPG11-204ENST00000557866 LINC00474Q9P2X8 69 aa4.6□□□□□ -1.67
SPG11-204ENST00000557866 ETDCA0A1B0GVM5 59 aa4.59□□□□□ -1.67
SPG11-204ENST00000557866 TMEM256-PLSCR3K7ERE1 68 aa4.59□□□□□ -1.67
SPG11-204ENST00000557866 ERC2-IT1O76042 136 aa4.59□□□□□ -1.67
SPG11-204ENST00000557866 SNCGO76070 127 aa4.59□□□□□ -1.67
SPG11-204ENST00000557866 REG3GQ6UW15 175 aa4.59□□□□□ -1.67
SPG11-204ENST00000557866 Q6ZRX8 168 aa4.59□□□□□ -1.67
SPG11-204ENST00000557866 A0A1B0GV72 72 aa4.58□□□□□ -1.68
SPG11-204ENST00000557866 LINC01547P58512 204 aaPredicted RBP4.58□□□□□ -1.68
SPG11-204ENST00000557866 Q8N377 158 aa4.57□□□□□ -1.68
SPG11-204ENST00000557866 SMCR5Q8TEV8 140 aa4.57□□□□□ -1.68
SPG11-204ENST00000557866 VPS25Q9BRG1 176 aa4.57□□□□□ -1.68
SPG11-204ENST00000557866 C14orf132Q9NPU4 83 aa4.57□□□□□ -1.68
SPG11-204ENST00000557866 PLAC8Q9NZF1 115 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms