RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ASPMQ8IZT6 3477 aa0.79□□□□□ -2.28
HIF1A-212ENST00000557538 CPSF4LA6NMK7 179 aaKnown RBP0.79□□□□□ -2.28
HIF1A-212ENST00000557538 NDUFA4O00483 81 aa0.79□□□□□ -2.28
HIF1A-212ENST00000557538 NDUFA1O15239 70 aa0.79□□□□□ -2.28
HIF1A-212ENST00000557538 PRKDCP78527 4128 aaKnown RBP0.79□□□□□ -2.28
HIF1A-212ENST00000557538 LRRK2Q5S007 2527 aa0.79□□□□□ -2.28
HIF1A-212ENST00000557538 H0YGX0 51 aa0.79□□□□□ -2.28
HIF1A-212ENST00000557538 UQCR11O14957 56 aa0.79□□□□□ -2.28
HIF1A-212ENST00000557538 ERHP84090 104 aaKnown RBP0.79□□□□□ -2.28
HIF1A-212ENST00000557538 HIVEP2P31629 2446 aa0.79□□□□□ -2.28
HIF1A-212ENST00000557538 ASH1LQ9NR48 2969 aaKnown RBP0.79□□□□□ -2.28
HIF1A-212ENST00000557538 TRGV2A0A075B6R0 118 aa0.79□□□□□ -2.28
HIF1A-212ENST00000557538 TRGV4A0A0C4DH28 118 aa0.79□□□□□ -2.28
HIF1A-212ENST00000557538 POLR2KP53803 58 aaKnown RBP0.79□□□□□ -2.28
HIF1A-212ENST00000557538 PSORS1C2Q9UIG4 136 aa0.79□□□□□ -2.28
HIF1A-212ENST00000557538 MYO7AQ13402 2215 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 HIVEP3Q5T1R4 2406 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 DNAH8Q96JB1 4490 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 A0A0G2JQZ4 141 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 A0A1W2PNN7 141 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 I3L2K1 104 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 SMIM11BQ8TCY0 68 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 PDE4DIPQ5VU43 2346 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 VPS13AQ96RL7 3174 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 C2CD3Q4AC94 2353 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 ETDCA0A1B0GVM5 59 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 RNASE3P12724 160 aaKnown RBP0.78□□□□□ -2.28
HIF1A-212ENST00000557538 HRES1P13985 223 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 WFDC10AQ9H1F0 79 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 R4GN34 69 aa0.78□□□□□ -2.28
HIF1A-212ENST00000557538 FREM3P0C091 2139 aa0.78□□□□□ -2.29
HIF1A-212ENST00000557538 C5orf42Q9H799 3197 aa0.78□□□□□ -2.29
HIF1A-212ENST00000557538 VPS13BQ7Z7G8 4022 aa0.78□□□□□ -2.29
HIF1A-212ENST00000557538 NEBP20929 6669 aa0.78□□□□□ -2.29
HIF1A-212ENST00000557538 ABCA12Q86UK0 2595 aa0.78□□□□□ -2.29
HIF1A-212ENST00000557538 TRIOO75962 3097 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 TNRC18O15417 2968 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-212ENST00000557538 SVEP1Q4LDE5 3571 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 MAST4O15021 2626 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 FXYD4P59646 89 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 LOC400499M0QZD8 3231 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 DNAH11Q96DT5 4516 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 PIEZO1Q92508 2521 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 ZNF469Q96JG9 3925 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-212ENST00000557538 VWFP04275 2813 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 COL6A5A8TX70 2615 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 CUBNO60494 3623 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 SHANK1Q9Y566 2161 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 IGKV2-40A0A087WW87 121 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-212ENST00000557538 DEFB131BA0A096LNP1 70 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 IGKV2D-40P01614 121 aaPredicted RBP0.77□□□□□ -2.29
HIF1A-212ENST00000557538 MGPP08493 103 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 RPS27P42677 84 aaKnown RBP0.77□□□□□ -2.29
HIF1A-212ENST00000557538 ACACBO00763 2458 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 LAMA3Q16787 3333 aa0.77□□□□□ -2.29
HIF1A-212ENST00000557538 CELSR1Q9NYQ6 3014 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 KMT2AQ03164 3969 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 TENM2Q9NT68 2774 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 DNAH7Q8WXX0 4024 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 LYNX1G3V0Z9 82 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 CCL22O00626 93 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 LY6G6CO95867 125 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 COX7BP24311 80 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 Q6ZQY7 126 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 TIMM8BQ9Y5J9 83 aaPredicted RBP0.76□□□□□ -2.29
HIF1A-212ENST00000557538 DNAH6Q9C0G6 4158 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 SPTBP11277 2137 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 G3V318 75 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 C5orf56Q8N8D9 126 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 WDFY4Q6ZS81 3184 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 VCANP13611 3396 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 EPG5Q9HCE0 2579 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 CHD6Q8TD26 2715 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 IGLV6-57P01721 117 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 PIGYQ3MUY2 71 aa0.76□□□□□ -2.29
HIF1A-212ENST00000557538 ALPK2Q86TB3 2170 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 OTOGLQ3ZCN5 2332 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 H3BSH0 61 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 HELZ2Q9BYK8 2649 aaKnown RBP0.75□□□□□ -2.29
HIF1A-212ENST00000557538 FRYLO94915 3013 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 FREM1Q5H8C1 2179 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 CMYA5Q8N3K9 4069 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 TRGV1A0A0A0MS02 117 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 IGKV2-24A0A0C4DH68 120 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 H0YAA0 97 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 LINC00158P58513 81 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 LINC00575Q6W349 94 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 Q8IZM0 81 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 GAFA1Q96PS6 74 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 PRO3102Q9H379 93 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 CCL26Q9Y258 94 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 FASNP49327 2511 aaKnown RBP0.75□□□□□ -2.29
HIF1A-212ENST00000557538 UBR4Q5T4S7 5183 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 FBN3Q75N90 2809 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 KIAA1109Q2LD37 5005 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 ZDBF2Q9HCK1 2354 aa0.75□□□□□ -2.29
HIF1A-212ENST00000557538 IGLV5-48A0A075B6I7 105 aa0.74□□□□□ -2.29
HIF1A-212ENST00000557538 RPL39P62891 51 aaKnown RBP0.74□□□□□ -2.29
HIF1A-212ENST00000557538 KRTAP20-1Q3LI63 56 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms