RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 RPL37AP8A6NKH3 93 aa11.56□□□□□ -0.56
XRCC3-218ENST00000557439 DNAH3Q8TD57 4116 aa11.55□□□□□ -0.56
XRCC3-218ENST00000557439 MRAPQ8TCY5 172 aa11.55□□□□□ -0.56
XRCC3-218ENST00000557439 C7orf33Q8WU49 177 aa11.55□□□□□ -0.56
XRCC3-218ENST00000557439 NKAPP1Q8N9T2 125 aa11.53□□□□□ -0.56
XRCC3-218ENST00000557439 C20orf197Q8N268 126 aa11.53□□□□□ -0.56
XRCC3-218ENST00000557439 LINC00588Q9Y4M8 146 aa11.53□□□□□ -0.56
XRCC3-218ENST00000557439 TRBV7-6A0A0J9YX20 115 aa11.52□□□□□ -0.56
XRCC3-218ENST00000557439 LYSTQ99698 3801 aa11.52□□□□□ -0.56
XRCC3-218ENST00000557439 Q8N9L7 120 aa11.52□□□□□ -0.57
XRCC3-218ENST00000557439 DNAH10OSP0CZ25 163 aa11.5□□□□□ -0.57
XRCC3-218ENST00000557439 PDE6GP18545 87 aa11.5□□□□□ -0.57
XRCC3-218ENST00000557439 DNAH1Q9P2D7 4330 aa11.49□□□□□ -0.57
XRCC3-218ENST00000557439 HUWE1Q7Z6Z7 4374 aaKnown RBP11.49□□□□□ -0.57
XRCC3-218ENST00000557439 C3orf84H3BNL1 204 aa11.48□□□□□ -0.57
XRCC3-218ENST00000557439 DNAH10Q8IVF4 4471 aa11.47□□□□□ -0.57
XRCC3-218ENST00000557439 KRTAP7-1Q8IUC3 87 aa11.47□□□□□ -0.57
XRCC3-218ENST00000557439 H3BQ85 93 aa11.47□□□□□ -0.57
XRCC3-218ENST00000557439 KCNQ1DNQ9H478 68 aa11.47□□□□□ -0.57
XRCC3-218ENST00000557439 Q8N377 158 aa11.46□□□□□ -0.57
XRCC3-218ENST00000557439 ST20-AS1Q8NBB2 130 aa11.45□□□□□ -0.58
XRCC3-218ENST00000557439 OXTP01178 125 aa11.44□□□□□ -0.58
XRCC3-218ENST00000557439 CXCL6P80162 114 aa11.44□□□□□ -0.58
XRCC3-218ENST00000557439 FAM19A5Q7Z5A7 132 aaPredicted RBP11.44□□□□□ -0.58
XRCC3-218ENST00000557439 Q9BRP9 147 aa11.44□□□□□ -0.58
XRCC3-218ENST00000557439 J3KT08 172 aa11.44□□□□□ -0.58
XRCC3-218ENST00000557439 TMEM258P61165 79 aa11.44□□□□□ -0.58
XRCC3-218ENST00000557439 DPH3Q96FX2 82 aa11.44□□□□□ -0.58
XRCC3-218ENST00000557439 SNURFQ9Y675 71 aa11.44□□□□□ -0.58
XRCC3-218ENST00000557439 C5orf47Q569G3 176 aa11.42□□□□□ -0.58
XRCC3-218ENST00000557439 TM2D3Q9BRN9 247 aa11.42□□□□□ -0.58
XRCC3-218ENST00000557439 MGAM2Q2M2H8 2515 aa11.42□□□□□ -0.58
XRCC3-218ENST00000557439 CSMD3Q7Z407 3707 aa11.41□□□□□ -0.58
XRCC3-218ENST00000557439 BPY2O14599 106 aa11.41□□□□□ -0.58
XRCC3-218ENST00000557439 TRAV7A0A075B6U4 112 aa11.39□□□□□ -0.59
XRCC3-218ENST00000557439 ERC2-IT1O76042 136 aa11.39□□□□□ -0.59
XRCC3-218ENST00000557439 IGLV1-50A0A075B6I6 118 aa11.39□□□□□ -0.59
XRCC3-218ENST00000557439 Q6ZRX8 168 aa11.39□□□□□ -0.59
XRCC3-218ENST00000557439 RMI2Q96E14 147 aa11.38□□□□□ -0.59
XRCC3-218ENST00000557439 COL7A1Q02388 2944 aa11.38□□□□□ -0.59
XRCC3-218ENST00000557439 KRTAP4-16G5E9R7 235 aaPredicted RBP11.38□□□□□ -0.59
XRCC3-218ENST00000557439 K7EIL1 84 aa11.37□□□□□ -0.59
XRCC3-218ENST00000557439 TLX1NBP0CAT3 122 aa11.37□□□□□ -0.59
XRCC3-218ENST00000557439 NREPQ16612 68 aa11.37□□□□□ -0.59
XRCC3-218ENST00000557439 STAB2Q8WWQ8 2551 aa11.37□□□□□ -0.59
XRCC3-218ENST00000557439 ETDCA0A1B0GVM5 59 aa11.37□□□□□ -0.59
XRCC3-218ENST00000557439 F8WDY8 70 aa11.37□□□□□ -0.59
XRCC3-218ENST00000557439 DNAH9Q9NYC9 4486 aa11.36□□□□□ -0.59
XRCC3-218ENST00000557439 A0A0G2JQZ4 141 aa11.35□□□□□ -0.59
XRCC3-218ENST00000557439 A0A1W2PNN7 141 aa11.35□□□□□ -0.59
XRCC3-218ENST00000557439 H7BZZ5 65 aa11.34□□□□□ -0.59
XRCC3-218ENST00000557439 IGKV4-1P06312 121 aa11.34□□□□□ -0.59
XRCC3-218ENST00000557439 A0A1W2PNM2 257 aa11.33□□□□□ -0.6
XRCC3-218ENST00000557439 KRTAP1-5Q9BYS1 174 aa11.33□□□□□ -0.6
XRCC3-218ENST00000557439 TENM2Q9NT68 2774 aa11.33□□□□□ -0.6
XRCC3-218ENST00000557439 MRPL55Q7Z7F7 128 aaKnown RBP11.33□□□□□ -0.6
XRCC3-218ENST00000557439 IGLV5-48A0A075B6I7 105 aa11.32□□□□□ -0.6
XRCC3-218ENST00000557439 IGKV2-24A0A0C4DH68 120 aa11.32□□□□□ -0.6
XRCC3-218ENST00000557439 UBE2BP63146 152 aa11.32□□□□□ -0.6
XRCC3-218ENST00000557439 PLA2G2DQ9UNK4 145 aa11.32□□□□□ -0.6
XRCC3-218ENST00000557439 SPRR1AP35321 89 aa11.31□□□□□ -0.6
XRCC3-218ENST00000557439 PRYO14603 147 aa11.31□□□□□ -0.6
XRCC3-218ENST00000557439 RPS28P62857 69 aaKnown RBP11.31□□□□□ -0.6
XRCC3-218ENST00000557439 DHRS4-AS1Q9P1J3 65 aa11.31□□□□□ -0.6
XRCC3-218ENST00000557439 SRRM2Q9UQ35 2752 aaKnown RBP11.3□□□□□ -0.6
XRCC3-218ENST00000557439 C1orf137Q5JT78 98 aa11.29□□□□□ -0.6
XRCC3-218ENST00000557439 IGLV5-37A0A075B6J1 123 aa11.29□□□□□ -0.6
XRCC3-218ENST00000557439 FAM236DA0A1B0GTK5 79 aa11.28□□□□□ -0.6
XRCC3-218ENST00000557439 FAM236CP0DP71 79 aa11.28□□□□□ -0.6
XRCC3-218ENST00000557439 F8WEM9 126 aa11.27□□□□□ -0.6
XRCC3-218ENST00000557439 BCE1O60756 84 aa11.27□□□□□ -0.61
XRCC3-218ENST00000557439 TNP2Q05952 138 aa11.27□□□□□ -0.61
XRCC3-218ENST00000557439 A0A096LNI7 61 aa11.26□□□□□ -0.61
XRCC3-218ENST00000557439 KLKP1Q107X0 134 aa11.26□□□□□ -0.61
XRCC3-218ENST00000557439 DNAH7Q8WXX0 4024 aa11.26□□□□□ -0.61
XRCC3-218ENST00000557439 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.26□□□□□ -0.61
XRCC3-218ENST00000557439 PRLHP81277 87 aa11.26□□□□□ -0.61
XRCC3-218ENST00000557439 FUSP35637 526 aaKnown RBP eCLIP11.25□□□□□ -0.612e-6■■■□□ 17.8
XRCC3-218ENST00000557439 REG3GQ6UW15 175 aa11.24□□□□□ -0.61
XRCC3-218ENST00000557439 CHTF8P0CG12 524 aa11.22□□□□□ -0.61
XRCC3-218ENST00000557439 Q8NBF4 154 aa11.22□□□□□ -0.61
XRCC3-218ENST00000557439 C4orf26Q17RF5 130 aa11.21□□□□□ -0.61
XRCC3-218ENST00000557439 SMIM29Q86T20 159 aa11.21□□□□□ -0.61
XRCC3-218ENST00000557439 TMEM254Q8TBM7 123 aa11.2□□□□□ -0.62
XRCC3-218ENST00000557439 PSCAO43653 123 aa11.2□□□□□ -0.62
XRCC3-218ENST00000557439 OCR1Q9BZK8 76 aa11.2□□□□□ -0.62
XRCC3-218ENST00000557439 DEFB116Q30KQ4 102 aa11.19□□□□□ -0.62
XRCC3-218ENST00000557439 KRTAP11-1Q8IUC1 163 aa11.19□□□□□ -0.62
XRCC3-218ENST00000557439 HIGD2AQ9BW72 106 aa11.19□□□□□ -0.62
XRCC3-218ENST00000557439 LINC00476Q8WZB0 136 aa11.19□□□□□ -0.62
XRCC3-218ENST00000557439 FAM30AQ9NZY2 134 aa11.19□□□□□ -0.62
XRCC3-218ENST00000557439 Q5XG85 94 aa11.18□□□□□ -0.62
XRCC3-218ENST00000557439 K7EQZ3 153 aa11.15□□□□□ -0.62
XRCC3-218ENST00000557439 DSCR10P59022 87 aa11.15□□□□□ -0.62
XRCC3-218ENST00000557439 UBE2DNLQ8IWF7 75 aa11.15□□□□□ -0.62
XRCC3-218ENST00000557439 PHF5AQ7RTV0 110 aaKnown RBP11.14□□□□□ -0.63
XRCC3-218ENST00000557439 C16orf90A8MZG2 172 aa11.14□□□□□ -0.63
XRCC3-218ENST00000557439 SPRR4Q96PI1 79 aa11.14□□□□□ -0.63
XRCC3-218ENST00000557439 IGFL1Q6UW32 110 aa11.13□□□□□ -0.63
XRCC3-218ENST00000557439 HRCT1Q6UXD1 115 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms