RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 A0A096LNJ9 63 aa6.12□□□□□ -1.43
SYNE3-205ENST00000557275 C9orf129Q5T035 196 aaKnown RBP6.12□□□□□ -1.43
SYNE3-205ENST00000557275 COL4A3Q01955 1670 aa6.12□□□□□ -1.43
SYNE3-205ENST00000557275 TEP1Q99973 2627 aaKnown RBP6.12□□□□□ -1.43
SYNE3-205ENST00000557275 LINC00167Q96N53 147 aa6.12□□□□□ -1.43
SYNE3-205ENST00000557275 PRO0461Q9UI25 63 aa6.12□□□□□ -1.43
SYNE3-205ENST00000557275 A8MUN3 132 aa6.12□□□□□ -1.43
SYNE3-205ENST00000557275 AVPP01185 164 aa6.11□□□□□ -1.43
SYNE3-205ENST00000557275 Q96NJ1 140 aa6.1□□□□□ -1.43
SYNE3-205ENST00000557275 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
SYNE3-205ENST00000557275 FAM19A4Q96LR4 140 aa6.1□□□□□ -1.43
SYNE3-205ENST00000557275 IGLV6-57P01721 117 aa6.09□□□□□ -1.43
SYNE3-205ENST00000557275 RBM12B-AS1Q9P1G2 102 aa6.08□□□□□ -1.44
SYNE3-205ENST00000557275 CRIP3Q6Q6R5 217 aa6.08□□□□□ -1.44
SYNE3-205ENST00000557275 DMAC1Q96GE9 116 aa6.08□□□□□ -1.44
SYNE3-205ENST00000557275 COX6B2Q6YFQ2 88 aa6.08□□□□□ -1.44
SYNE3-205ENST00000557275 WIPF1O43516 503 aa6.07□□□□□ -1.44
SYNE3-205ENST00000557275 C10orf99Q6UWK7 81 aa6.07□□□□□ -1.44
SYNE3-205ENST00000557275 ST20-AS1Q8NBB2 130 aa6.07□□□□□ -1.44
SYNE3-205ENST00000557275 FHL3Q13643 280 aa6.07□□□□□ -1.44
SYNE3-205ENST00000557275 CAMK2N1Q7Z7J9 78 aa6.07□□□□□ -1.44
SYNE3-205ENST00000557275 MAP1AP78559 2803 aaPredicted RBP6.05□□□□□ -1.44
SYNE3-205ENST00000557275 SMCPP49901 116 aaPredicted RBP6.05□□□□□ -1.44
SYNE3-205ENST00000557275 A0A1B0GVX0 72 aa6.05□□□□□ -1.44
SYNE3-205ENST00000557275 K7EQZ3 153 aa6.04□□□□□ -1.44
SYNE3-205ENST00000557275 LINC00336Q6ZUF6 198 aa6.04□□□□□ -1.44
SYNE3-205ENST00000557275 H7BZZ5 65 aa6.03□□□□□ -1.44
SYNE3-205ENST00000557275 FAM218AQ96MZ4 157 aa6.03□□□□□ -1.44
SYNE3-205ENST00000557275 C18orf65Q6ZTR6 163 aa6.03□□□□□ -1.44
SYNE3-205ENST00000557275 FAM104AQ969W3 186 aa6.03□□□□□ -1.44
SYNE3-205ENST00000557275 UTRNP46939 3433 aa6.02□□□□□ -1.45
SYNE3-205ENST00000557275 CHTF8P0CG12 524 aa6.01□□□□□ -1.45
SYNE3-205ENST00000557275 PCNTO95613 3336 aa6.01□□□□□ -1.45
SYNE3-205ENST00000557275 ZNF292O60281 2723 aa6.01□□□□□ -1.45
SYNE3-205ENST00000557275 KCNQ1DNQ9H478 68 aa6.01□□□□□ -1.45
SYNE3-205ENST00000557275 ITPR2Q14571 2701 aa6.01□□□□□ -1.45
SYNE3-205ENST00000557275 Q6ZSN1 163 aa6□□□□□ -1.45
SYNE3-205ENST00000557275 A0A1W2PNU3 283 aaPredicted RBP5.99□□□□□ -1.45
SYNE3-205ENST00000557275 RTL8CO15255 209 aa5.99□□□□□ -1.45
SYNE3-205ENST00000557275 LINC00304Q8N9R0 145 aa5.99□□□□□ -1.45
SYNE3-205ENST00000557275 DNAH10OSP0CZ25 163 aa5.99□□□□□ -1.45
SYNE3-205ENST00000557275 J3QL48 77 aa5.98□□□□□ -1.45
SYNE3-205ENST00000557275 LAMA2P24043 3122 aaKnown RBP5.97□□□□□ -1.45
SYNE3-205ENST00000557275 NBDYA0A0U1RRE5 68 aa5.96□□□□□ -1.45
SYNE3-205ENST00000557275 Q75L30 129 aa5.96□□□□□ -1.46
SYNE3-205ENST00000557275 C15orf56Q8N910 161 aa5.95□□□□□ -1.46
SYNE3-205ENST00000557275 HRES1P13985 223 aa5.94□□□□□ -1.46
SYNE3-205ENST00000557275 LINC00528Q8N1L1 170 aa5.94□□□□□ -1.46
SYNE3-205ENST00000557275 IGLV5-37A0A075B6J1 123 aa5.93□□□□□ -1.46
SYNE3-205ENST00000557275 H3BS24 57 aa5.93□□□□□ -1.46
SYNE3-205ENST00000557275 TNP2Q05952 138 aa5.93□□□□□ -1.46
SYNE3-205ENST00000557275 WWC2-AS2Q96NR7 200 aa5.93□□□□□ -1.46
SYNE3-205ENST00000557275 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
SYNE3-205ENST00000557275 IGFL1Q6UW32 110 aa5.93□□□□□ -1.46
SYNE3-205ENST00000557275 PHF5AQ7RTV0 110 aaKnown RBP5.93□□□□□ -1.46
SYNE3-205ENST00000557275 OBSCN-AS1Q96MR7 158 aa5.92□□□□□ -1.46
SYNE3-205ENST00000557275 LINC00588Q9Y4M8 146 aa5.92□□□□□ -1.46
SYNE3-205ENST00000557275 ZNF861PO60384 105 aa5.92□□□□□ -1.46
SYNE3-205ENST00000557275 LINC00315P59091 139 aa5.91□□□□□ -1.46
SYNE3-205ENST00000557275 C5orf42Q9H799 3197 aa5.91□□□□□ -1.46
SYNE3-205ENST00000557275 IGLV1-50A0A075B6I6 118 aa5.91□□□□□ -1.46
SYNE3-205ENST00000557275 SMR3AQ99954 134 aa5.9□□□□□ -1.46
SYNE3-205ENST00000557275 ASB16-AS1Q495Z4 193 aa5.9□□□□□ -1.47
SYNE3-205ENST00000557275 IGLV5-48A0A075B6I7 105 aa5.89□□□□□ -1.47
SYNE3-205ENST00000557275 A0A1B0GU33 70 aa5.89□□□□□ -1.47
SYNE3-205ENST00000557275 CFAP54Q96N23 3096 aa5.89□□□□□ -1.47
SYNE3-205ENST00000557275 LITAFQ99732 161 aa5.89□□□□□ -1.47
SYNE3-205ENST00000557275 FLNCQ14315 2725 aa5.89□□□□□ -1.47
SYNE3-205ENST00000557275 TLX1NBP0CAT3 122 aa5.89□□□□□ -1.47
SYNE3-205ENST00000557275 NSD1Q96L73 2696 aaPredicted RBP5.88□□□□□ -1.47
SYNE3-205ENST00000557275 IGSF10Q6WRI0 2623 aa5.88□□□□□ -1.47
SYNE3-205ENST00000557275 A0A0D9SG42 100 aa5.87□□□□□ -1.47
SYNE3-205ENST00000557275 EIF4EBP3O60516 100 aaPredicted RBP5.87□□□□□ -1.47
SYNE3-205ENST00000557275 C9orf163Q8N9P6 203 aa5.86□□□□□ -1.47
SYNE3-205ENST00000557275 DSCR10P59022 87 aa5.86□□□□□ -1.47
SYNE3-205ENST00000557275 IGLV7-46A0A075B6I9 117 aa5.84□□□□□ -1.47
SYNE3-205ENST00000557275 Q8NAQ8 132 aa5.84□□□□□ -1.47
SYNE3-205ENST00000557275 CDSNQ15517 529 aa5.83□□□□□ -1.48
SYNE3-205ENST00000557275 A0A0C4DFX4 3053 aa5.82□□□□□ -1.48
SYNE3-205ENST00000557275 Q8N377 158 aa5.82□□□□□ -1.48
SYNE3-205ENST00000557275 PRR34Q9NV39 138 aa5.82□□□□□ -1.48
SYNE3-205ENST00000557275 IGLV7-43P04211 117 aa5.82□□□□□ -1.48
SYNE3-205ENST00000557275 WISP2O76076 250 aa5.81□□□□□ -1.48
SYNE3-205ENST00000557275 OCR1Q9BZK8 76 aa5.8□□□□□ -1.48
SYNE3-205ENST00000557275 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
SYNE3-205ENST00000557275 COL4A2P08572 1712 aa5.79□□□□□ -1.48
SYNE3-205ENST00000557275 TRANK1O15050 2925 aa5.78□□□□□ -1.48
SYNE3-205ENST00000557275 TRIOO75962 3097 aa5.78□□□□□ -1.48
SYNE3-205ENST00000557275 FAM168BA1KXE4 195 aa5.77□□□□□ -1.49
SYNE3-205ENST00000557275 SPINK7P58062 85 aa5.77□□□□□ -1.49
SYNE3-205ENST00000557275 APCP25054 2843 aa5.77□□□□□ -1.49
SYNE3-205ENST00000557275 KLK9Q2XQG4 91 aa5.77□□□□□ -1.49
SYNE3-205ENST00000557275 ZNF575Q86XF7 245 aa5.77□□□□□ -1.49
SYNE3-205ENST00000557275 SPRR4Q96PI1 79 aa5.77□□□□□ -1.49
SYNE3-205ENST00000557275 CNBPP62633 177 aaKnown RBP5.76□□□□□ -1.49
SYNE3-205ENST00000557275 Q6ZSA8 131 aa5.75□□□□□ -1.49
SYNE3-205ENST00000557275 C9orf92A6NGG3 77 aa5.75□□□□□ -1.49
SYNE3-205ENST00000557275 CSAG1Q6PB30 78 aa5.75□□□□□ -1.49
SYNE3-205ENST00000557275 KRTAP16-1A8MUX0 517 aa5.75□□□□□ -1.49
SYNE3-205ENST00000557275 Q8N1X5 172 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms