RNA–Protein interactions for RNA: ENST00000557060.1

SYNE2-225, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 3,203 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-225ENST00000557060 TMEM256-PLSCR3K7ERE1 68 aa3.83□□□□□ -1.8
SYNE2-225ENST00000557060 LY6G6CO95867 125 aa3.83□□□□□ -1.8
SYNE2-225ENST00000557060 SMCR5Q8TEV8 140 aa3.83□□□□□ -1.8
SYNE2-225ENST00000557060 LINC00167Q96N53 147 aa3.82□□□□□ -1.8
SYNE2-225ENST00000557060 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
SYNE2-225ENST00000557060 NBDYA0A0U1RRE5 68 aa3.82□□□□□ -1.8
SYNE2-225ENST00000557060 LINC00846Q9NV44 126 aa3.82□□□□□ -1.8
SYNE2-225ENST00000557060 NHLRC4P0CG21 123 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-225ENST00000557060 UBE2BP63146 152 aa3.81□□□□□ -1.8
SYNE2-225ENST00000557060 SDIM1Q6ZPB5 146 aa3.81□□□□□ -1.8
SYNE2-225ENST00000557060 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
SYNE2-225ENST00000557060 STARD9Q9P2P6 4700 aa3.81□□□□□ -1.8
SYNE2-225ENST00000557060 LOC107984640A0A0U1RRK4 108 aa3.81□□□□□ -1.8
SYNE2-225ENST00000557060 ETDCA0A1B0GVM5 59 aa3.81□□□□□ -1.8
SYNE2-225ENST00000557060 PRLHP81277 87 aa3.81□□□□□ -1.8
SYNE2-225ENST00000557060 MRPL55Q7Z7F7 128 aaKnown RBP3.81□□□□□ -1.8
SYNE2-225ENST00000557060 MUC7Q8TAX7 377 aa3.81□□□□□ -1.8
SYNE2-225ENST00000557060 A0A1W2PNN7 141 aa3.8□□□□□ -1.8
SYNE2-225ENST00000557060 ELOF1P60002 83 aaKnown RBP3.8□□□□□ -1.8
SYNE2-225ENST00000557060 RBM3P98179 157 aaKnown RBP3.8□□□□□ -1.8
SYNE2-225ENST00000557060 ST20-AS1Q8NBB2 130 aa3.8□□□□□ -1.8
SYNE2-225ENST00000557060 PLECQ15149 4684 aaKnown RBP3.8□□□□□ -1.8
SYNE2-225ENST00000557060 HIGD2AQ9BW72 106 aa3.8□□□□□ -1.8
SYNE2-225ENST00000557060 DSCR8Q96T75 97 aa3.8□□□□□ -1.8
SYNE2-225ENST00000557060 PHF5AQ7RTV0 110 aaKnown RBP3.79□□□□□ -1.8
SYNE2-225ENST00000557060 KMT2AQ03164 3969 aa3.79□□□□□ -1.8
SYNE2-225ENST00000557060 A0A0G2JQZ4 141 aa3.79□□□□□ -1.8
SYNE2-225ENST00000557060 HIST1H4AP62805 103 aaKnown RBP3.79□□□□□ -1.8
SYNE2-225ENST00000557060 LINC01600Q96MT4 127 aa3.79□□□□□ -1.8
SYNE2-225ENST00000557060 PANO1I0J062 215 aa3.78□□□□□ -1.8
SYNE2-225ENST00000557060 ERC2-IT1O76042 136 aa3.78□□□□□ -1.8
SYNE2-225ENST00000557060 IGLV1-50A0A075B6I6 118 aa3.78□□□□□ -1.8
SYNE2-225ENST00000557060 A0A087WVE0 104 aa3.78□□□□□ -1.8
SYNE2-225ENST00000557060 JMJD7-PLA2G4BH0Y9G9 81 aa3.78□□□□□ -1.8
SYNE2-225ENST00000557060 SCXQ7RTU7 201 aa3.78□□□□□ -1.8
SYNE2-225ENST00000557060 FAM19A1Q7Z5A9 133 aa3.78□□□□□ -1.8
SYNE2-225ENST00000557060 FAM240AA0A1B0GVK7 77 aa3.78□□□□□ -1.81
SYNE2-225ENST00000557060 HAMPP81172 84 aa3.78□□□□□ -1.81
SYNE2-225ENST00000557060 Q9BRP9 147 aa3.78□□□□□ -1.81
SYNE2-225ENST00000557060 ANAPC13Q9BS18 74 aa3.78□□□□□ -1.81
SYNE2-225ENST00000557060 KCNQ1DNQ9H478 68 aa3.78□□□□□ -1.81
SYNE2-225ENST00000557060 DNAH1Q9P2D7 4330 aa3.77□□□□□ -1.81
SYNE2-225ENST00000557060 A0A1B0GX51 115 aa3.77□□□□□ -1.81
SYNE2-225ENST00000557060 C3orf84H3BNL1 204 aa3.77□□□□□ -1.81
SYNE2-225ENST00000557060 TLX1NBP0CAT3 122 aa3.77□□□□□ -1.81
SYNE2-225ENST00000557060 NDUFV3P56181 108 aaKnown RBP3.77□□□□□ -1.81
SYNE2-225ENST00000557060 FAM236AA0A1B0GUQ0 79 aa3.77□□□□□ -1.81
SYNE2-225ENST00000557060 FAM236BA0A1B0GV22 79 aa3.77□□□□□ -1.81
SYNE2-225ENST00000557060 C16orf90A8MZG2 172 aa3.77□□□□□ -1.81
SYNE2-225ENST00000557060 CCKP06307 115 aa3.77□□□□□ -1.81
SYNE2-225ENST00000557060 LRCOL1A6NCL2 159 aa3.76□□□□□ -1.81
SYNE2-225ENST00000557060 ACYP1P07311 99 aa3.76□□□□□ -1.81
SYNE2-225ENST00000557060 REG3GQ6UW15 175 aa3.76□□□□□ -1.81
SYNE2-225ENST00000557060 Q6ZRX8 168 aa3.76□□□□□ -1.81
SYNE2-225ENST00000557060 KRTAP11-1Q8IUC1 163 aa3.76□□□□□ -1.81
SYNE2-225ENST00000557060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-225ENST00000557060 LINC00643Q86TS7 51 aa3.76□□□□□ -1.81
SYNE2-225ENST00000557060 F8WDY8 70 aa3.76□□□□□ -1.81
SYNE2-225ENST00000557060 OBSCN-AS1Q96MR7 158 aa3.76□□□□□ -1.81
SYNE2-225ENST00000557060 C14orf177Q52M58 125 aa3.75□□□□□ -1.81
SYNE2-225ENST00000557060 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-225ENST00000557060 B5MCH6 92 aa3.75□□□□□ -1.81
SYNE2-225ENST00000557060 CNBPP62633 177 aaKnown RBP3.75□□□□□ -1.81
SYNE2-225ENST00000557060 Q6ZQT0 140 aa3.75□□□□□ -1.81
SYNE2-225ENST00000557060 Q6ZRN7 208 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-225ENST00000557060 Q8N377 158 aa3.75□□□□□ -1.81
SYNE2-225ENST00000557060 A0A087WTM6 91 aa3.74□□□□□ -1.81
SYNE2-225ENST00000557060 UBL5Q9BZL1 73 aa3.74□□□□□ -1.81
SYNE2-225ENST00000557060 C9orf163Q8N9P6 203 aa3.74□□□□□ -1.81
SYNE2-225ENST00000557060 UBE2AP49459 152 aa3.74□□□□□ -1.81
SYNE2-225ENST00000557060 PRYO14603 147 aa3.73□□□□□ -1.81
SYNE2-225ENST00000557060 C1orf134Q5TEV5 83 aa3.73□□□□□ -1.81
SYNE2-225ENST00000557060 Q8N9L7 120 aa3.73□□□□□ -1.81
SYNE2-225ENST00000557060 RTL8CO15255 209 aa3.73□□□□□ -1.81
SYNE2-225ENST00000557060 SCGB1A1P11684 91 aa3.73□□□□□ -1.81
SYNE2-225ENST00000557060 DHRS4-AS1Q9P1J3 65 aa3.73□□□□□ -1.81
SYNE2-225ENST00000557060 TRBV7-6A0A0J9YX20 115 aa3.72□□□□□ -1.81
SYNE2-225ENST00000557060 KRTAP4-16G5E9R7 235 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-225ENST00000557060 IGLV5-52A0A0A0MRZ9 124 aa3.72□□□□□ -1.81
SYNE2-225ENST00000557060 EPM2AB3EWF7 344 aa3.72□□□□□ -1.81
SYNE2-225ENST00000557060 Q6ZVQ6 151 aa3.72□□□□□ -1.81
SYNE2-225ENST00000557060 CCDC179H3BU77 68 aa3.71□□□□□ -1.82
SYNE2-225ENST00000557060 IGLV5-37A0A075B6J1 123 aa3.71□□□□□ -1.82
SYNE2-225ENST00000557060 SPRR1AP35321 89 aa3.71□□□□□ -1.82
SYNE2-225ENST00000557060 DEFB116Q30KQ4 102 aa3.71□□□□□ -1.82
SYNE2-225ENST00000557060 TRBV7-7A0A0K0K1E9 115 aa3.7□□□□□ -1.82
SYNE2-225ENST00000557060 LINC01547P58512 204 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-225ENST00000557060 C1orf137Q5JT78 98 aa3.7□□□□□ -1.82
SYNE2-225ENST00000557060 LOC110117498A0A087WWA1 95 aa3.7□□□□□ -1.82
SYNE2-225ENST00000557060 TRBV7-4A0A0J9YYF1 115 aa3.7□□□□□ -1.82
SYNE2-225ENST00000557060 F8WEM9 126 aa3.7□□□□□ -1.82
SYNE2-225ENST00000557060 KRTAP21-3Q3LHN1 58 aa3.7□□□□□ -1.82
SYNE2-225ENST00000557060 WWC2-AS2Q96NR7 200 aa3.7□□□□□ -1.82
SYNE2-225ENST00000557060 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
SYNE2-225ENST00000557060 Q6ZR54 194 aa3.7□□□□□ -1.82
SYNE2-225ENST00000557060 LINC00476Q8WZB0 136 aa3.7□□□□□ -1.82
SYNE2-225ENST00000557060 NREPQ16612 68 aa3.69□□□□□ -1.82
SYNE2-225ENST00000557060 Q6JHZ5 121 aa3.69□□□□□ -1.82
SYNE2-225ENST00000557060 IGLV9-49A0A0B4J1Y8 123 aa3.69□□□□□ -1.82
SYNE2-225ENST00000557060 KRTAP10-2P60368 255 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms