RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 C3orf22Q8N5N4 141 aa6.08□□□□□ -1.44
SNX6-208ENST00000556712 LINC00308Q8TCZ7 52 aa6.08□□□□□ -1.44
SNX6-208ENST00000556712 SPRR4Q96PI1 79 aa6.08□□□□□ -1.44
SNX6-208ENST00000556712 TIMM17BO60830 172 aa6.07□□□□□ -1.44
SNX6-208ENST00000556712 IGLV6-57P01721 117 aa6.07□□□□□ -1.44
SNX6-208ENST00000556712 S100A7L2Q5SY68 101 aa6.07□□□□□ -1.44
SNX6-208ENST00000556712 SMCR5Q8TEV8 140 aa6.07□□□□□ -1.44
SNX6-208ENST00000556712 HIST1H2BLQ99880 126 aa6.07□□□□□ -1.44
SNX6-208ENST00000556712 LPAP08519 4548 aa6.07□□□□□ -1.44
SNX6-208ENST00000556712 TRAV23DV6A0A075B6W5 121 aa6.06□□□□□ -1.44
SNX6-208ENST00000556712 B5MCH6 92 aa6.06□□□□□ -1.44
SNX6-208ENST00000556712 S100A12P80511 92 aa6.06□□□□□ -1.44
SNX6-208ENST00000556712 ERC2-IT1O76042 136 aa6.05□□□□□ -1.44
SNX6-208ENST00000556712 S100A2P29034 98 aa6.05□□□□□ -1.44
SNX6-208ENST00000556712 PCP2Q8IVA1 136 aa6.05□□□□□ -1.44
SNX6-208ENST00000556712 Q9BRP9 147 aa6.05□□□□□ -1.44
SNX6-208ENST00000556712 PPDPFQ9H3Y8 114 aa6.05□□□□□ -1.44
SNX6-208ENST00000556712 SPANXCQ9NY87 97 aa6.05□□□□□ -1.44
SNX6-208ENST00000556712 PRR4Q16378 134 aa6.04□□□□□ -1.44
SNX6-208ENST00000556712 SCGB1D4Q6XE38 83 aa6.04□□□□□ -1.44
SNX6-208ENST00000556712 Q6ZRX8 168 aa6.04□□□□□ -1.44
SNX6-208ENST00000556712 LINC00304Q8N9R0 145 aa6.04□□□□□ -1.44
SNX6-208ENST00000556712 ZNF706Q9Y5V0 76 aaPredicted RBP6.04□□□□□ -1.44
SNX6-208ENST00000556712 ZNF73O43830 326 aaPredicted RBP6.03□□□□□ -1.44
SNX6-208ENST00000556712 S100A6P06703 90 aa6.03□□□□□ -1.44
SNX6-208ENST00000556712 OR13C6PQ8NH95 151 aa6.03□□□□□ -1.44
SNX6-208ENST00000556712 SPANXDQ9BXN6 97 aa6.03□□□□□ -1.44
SNX6-208ENST00000556712 SNRPEP62304 92 aaKnown RBP6.02□□□□□ -1.45
SNX6-208ENST00000556712 GAGE2AQ6NT46 116 aa6.02□□□□□ -1.45
SNX6-208ENST00000556712 RETNLBQ9BQ08 111 aa6.02□□□□□ -1.45
SNX6-208ENST00000556712 AKR1D1P51857 326 aa6□□□□□ -1.45
SNX6-208ENST00000556712 LINC00483Q53H64 154 aa6□□□□□ -1.45
SNX6-208ENST00000556712 IGLV9-49A0A0B4J1Y8 123 aa5.99□□□□□ -1.45
SNX6-208ENST00000556712 ST20-AS1Q8NBB2 130 aa5.99□□□□□ -1.45
SNX6-208ENST00000556712 MOBPQ13875 183 aa5.98□□□□□ -1.45
SNX6-208ENST00000556712 MUSTN1Q8IVN3 82 aa5.98□□□□□ -1.45
SNX6-208ENST00000556712 Q8NBF4 154 aa5.98□□□□□ -1.45
SNX6-208ENST00000556712 C5orf52A6NGY3 159 aa5.97□□□□□ -1.45
SNX6-208ENST00000556712 IFITM1P13164 125 aa5.97□□□□□ -1.45
SNX6-208ENST00000556712 JOSD1Q15040 202 aaPredicted RBP5.97□□□□□ -1.45
SNX6-208ENST00000556712 LINC00518Q8N0U6 118 aa5.97□□□□□ -1.45
SNX6-208ENST00000556712 RNF213Q63HN8 5207 aa5.97□□□□□ -1.45
SNX6-208ENST00000556712 HSBP1L1C9JCN9 74 aa5.96□□□□□ -1.46
SNX6-208ENST00000556712 SCGB1D1O95968 90 aa5.96□□□□□ -1.46
SNX6-208ENST00000556712 C6orf99Q4VX62 202 aa5.96□□□□□ -1.46
SNX6-208ENST00000556712 CBY1Q9Y3M2 126 aa5.96□□□□□ -1.46
SNX6-208ENST00000556712 A6NDN8 102 aa5.95□□□□□ -1.46
SNX6-208ENST00000556712 COX7BP24311 80 aa5.95□□□□□ -1.46
SNX6-208ENST00000556712 HINT1P49773 126 aaPredicted RBP5.95□□□□□ -1.46
SNX6-208ENST00000556712 Q6ZVH6 145 aa5.95□□□□□ -1.46
SNX6-208ENST00000556712 COPS9Q8WXC6 57 aa5.95□□□□□ -1.46
SNX6-208ENST00000556712 ELOF1P60002 83 aaKnown RBP5.94□□□□□ -1.46
SNX6-208ENST00000556712 C9orf153Q5TBE3 101 aa5.93□□□□□ -1.46
SNX6-208ENST00000556712 SPAG11AQ6PDA7 123 aa5.92□□□□□ -1.46
SNX6-208ENST00000556712 DHRS4-AS1Q9P1J3 65 aa5.92□□□□□ -1.46
SNX6-208ENST00000556712 IGLV7-46A0A075B6I9 117 aa5.9□□□□□ -1.46
SNX6-208ENST00000556712 TRAV13-2A0A0B4J235 113 aa5.9□□□□□ -1.46
SNX6-208ENST00000556712 A4D1N5 150 aa5.9□□□□□ -1.46
SNX6-208ENST00000556712 COX8AP10176 69 aa5.9□□□□□ -1.46
SNX6-208ENST00000556712 DEFB105AQ8NG35 78 aa5.9□□□□□ -1.46
SNX6-208ENST00000556712 SMIM11BQ8TCY0 68 aa5.9□□□□□ -1.46
SNX6-208ENST00000556712 C12orf57Q99622 126 aa5.9□□□□□ -1.46
SNX6-208ENST00000556712 A0A1B0GWB2 263 aa5.89□□□□□ -1.47
SNX6-208ENST00000556712 SPRR1BP22528 89 aa5.89□□□□□ -1.47
SNX6-208ENST00000556712 CTAG1AP78358 180 aa5.89□□□□□ -1.47
SNX6-208ENST00000556712 SSBP3-AS1Q7Z2R9 100 aa5.89□□□□□ -1.47
SNX6-208ENST00000556712 PAM16Q9Y3D7 125 aa5.89□□□□□ -1.47
SNX6-208ENST00000556712 TRBV7-6A0A0J9YX20 115 aa5.88□□□□□ -1.47
SNX6-208ENST00000556712 A6NJY4 79 aa5.88□□□□□ -1.47
SNX6-208ENST00000556712 SPINK1P00995 79 aa5.88□□□□□ -1.47
SNX6-208ENST00000556712 Q1RN00 199 aa5.88□□□□□ -1.47
SNX6-208ENST00000556712 C14orf144Q96I85 54 aa5.88□□□□□ -1.47
SNX6-208ENST00000556712 HIST1H4GQ99525 98 aa5.88□□□□□ -1.47
SNX6-208ENST00000556712 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
SNX6-208ENST00000556712 SPATA45Q537H7 98 aa5.87□□□□□ -1.47
SNX6-208ENST00000556712 Q8N377 158 aa5.87□□□□□ -1.47
SNX6-208ENST00000556712 LINC01547P58512 204 aaPredicted RBP5.86□□□□□ -1.47
SNX6-208ENST00000556712 TAL2Q16559 108 aa5.86□□□□□ -1.47
SNX6-208ENST00000556712 HRCT1Q6UXD1 115 aa5.86□□□□□ -1.47
SNX6-208ENST00000556712 VAMP8Q9BV40 100 aa5.86□□□□□ -1.47
SNX6-208ENST00000556712 DLEU1O43261 78 aa5.85□□□□□ -1.47
SNX6-208ENST00000556712 SLC25A34Q6PIV7 304 aa5.85□□□□□ -1.47
SNX6-208ENST00000556712 CDIP1Q9H305 208 aa5.85□□□□□ -1.47
SNX6-208ENST00000556712 LAMTOR3Q9UHA4 124 aa5.85□□□□□ -1.47
SNX6-208ENST00000556712 TMA7Q9Y2S6 64 aaKnown RBP5.85□□□□□ -1.47
SNX6-208ENST00000556712 MUC17Q685J3 4493 aa5.84□□□□□ -1.47
SNX6-208ENST00000556712 IGLV5-48A0A075B6I7 105 aa5.84□□□□□ -1.47
SNX6-208ENST00000556712 TEX49A0A1B0GTD5 131 aa5.84□□□□□ -1.47
SNX6-208ENST00000556712 RPS29P62273 56 aaKnown RBP5.84□□□□□ -1.47
SNX6-208ENST00000556712 C2orf91Q6ZV80 131 aa5.84□□□□□ -1.47
SNX6-208ENST00000556712 FP248Q71RG6 208 aaPredicted RBP5.84□□□□□ -1.47
SNX6-208ENST00000556712 SMIM29Q86T20 159 aa5.84□□□□□ -1.47
SNX6-208ENST00000556712 A0A0G2JQZ4 141 aa5.83□□□□□ -1.48
SNX6-208ENST00000556712 H7C2G1 150 aa5.82□□□□□ -1.48
SNX6-208ENST00000556712 NHP2Q9NX24 153 aaKnown RBP5.82□□□□□ -1.48
SNX6-208ENST00000556712 SLC25A20O43772 301 aa5.81□□□□□ -1.48
SNX6-208ENST00000556712 KRTAP13-3Q3SY46 172 aa5.81□□□□□ -1.48
SNX6-208ENST00000556712 PYY3Q5JQD4 70 aa5.81□□□□□ -1.48
SNX6-208ENST00000556712 LINC00575Q6W349 94 aa5.81□□□□□ -1.48
SNX6-208ENST00000556712 HIGD1BQ9P298 99 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms