RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 DYNC2H1Q8NCM8 4307 aaKnown RBP6.51□□□□□ -1.37
TMEM260-211ENST00000556648 RBM3P98179 157 aaKnown RBP6.5□□□□□ -1.37
TMEM260-211ENST00000556648 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
TMEM260-211ENST00000556648 IGLV5-37A0A075B6J1 123 aa6.5□□□□□ -1.37
TMEM260-211ENST00000556648 FAM236AA0A1B0GUQ0 79 aa6.5□□□□□ -1.37
TMEM260-211ENST00000556648 FAM236BA0A1B0GV22 79 aa6.5□□□□□ -1.37
TMEM260-211ENST00000556648 DNAH10Q8IVF4 4471 aa6.49□□□□□ -1.37
TMEM260-211ENST00000556648 LOC107984640A0A0U1RRK4 108 aa6.49□□□□□ -1.37
TMEM260-211ENST00000556648 DNAH7Q8WXX0 4024 aa6.49□□□□□ -1.37
TMEM260-211ENST00000556648 LOC110117498A0A087WWA1 95 aa6.49□□□□□ -1.37
TMEM260-211ENST00000556648 Q6JHZ5 121 aa6.49□□□□□ -1.37
TMEM260-211ENST00000556648 CSMD3Q7Z407 3707 aa6.48□□□□□ -1.37
TMEM260-211ENST00000556648 IGLV1-50A0A075B6I6 118 aa6.48□□□□□ -1.37
TMEM260-211ENST00000556648 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.48□□□□□ -1.37
TMEM260-211ENST00000556648 A0A096LNI7 61 aa6.48□□□□□ -1.37
TMEM260-211ENST00000556648 PSCAO43653 123 aa6.48□□□□□ -1.37
TMEM260-211ENST00000556648 IMUPQ9GZP8 106 aa6.48□□□□□ -1.37
TMEM260-211ENST00000556648 KRTAP4-16G5E9R7 235 aaPredicted RBP6.47□□□□□ -1.37
TMEM260-211ENST00000556648 Q9BRP9 147 aa6.47□□□□□ -1.37
TMEM260-211ENST00000556648 IGKV2-24A0A0C4DH68 120 aa6.46□□□□□ -1.38
TMEM260-211ENST00000556648 CCDC179H3BU77 68 aa6.46□□□□□ -1.38
TMEM260-211ENST00000556648 PRYO14603 147 aa6.46□□□□□ -1.38
TMEM260-211ENST00000556648 MRPL55Q7Z7F7 128 aaKnown RBP6.46□□□□□ -1.38
TMEM260-211ENST00000556648 A0A087WVE0 104 aa6.45□□□□□ -1.38
TMEM260-211ENST00000556648 B5MCH6 92 aa6.45□□□□□ -1.38
TMEM260-211ENST00000556648 SPRR1AP35321 89 aa6.45□□□□□ -1.38
TMEM260-211ENST00000556648 DEFB105AQ8NG35 78 aa6.45□□□□□ -1.38
TMEM260-211ENST00000556648 DSCR8Q96T75 97 aa6.45□□□□□ -1.38
TMEM260-211ENST00000556648 TRBV7-4A0A0J9YYF1 115 aa6.45□□□□□ -1.38
TMEM260-211ENST00000556648 H3BQ85 93 aa6.45□□□□□ -1.38
TMEM260-211ENST00000556648 CNBPP62633 177 aaKnown RBP6.45□□□□□ -1.38
TMEM260-211ENST00000556648 Q6ZRX8 168 aa6.45□□□□□ -1.38
TMEM260-211ENST00000556648 A0A1W2PNN7 141 aa6.44□□□□□ -1.38
TMEM260-211ENST00000556648 NUPR2A6NF83 97 aa6.44□□□□□ -1.38
TMEM260-211ENST00000556648 CHTF8P0CG12 524 aa6.44□□□□□ -1.38
TMEM260-211ENST00000556648 LINC01547P58512 204 aaPredicted RBP6.44□□□□□ -1.38
TMEM260-211ENST00000556648 NBDYA0A0U1RRE5 68 aa6.43□□□□□ -1.38
TMEM260-211ENST00000556648 ETDCA0A1B0GVM5 59 aa6.43□□□□□ -1.38
TMEM260-211ENST00000556648 ERC2-IT1O76042 136 aa6.43□□□□□ -1.38
TMEM260-211ENST00000556648 Q8N377 158 aa6.43□□□□□ -1.38
TMEM260-211ENST00000556648 ST20-AS1Q8NBB2 130 aa6.43□□□□□ -1.38
TMEM260-211ENST00000556648 STARD9Q9P2P6 4700 aa6.43□□□□□ -1.38
TMEM260-211ENST00000556648 PLECQ15149 4684 aaKnown RBP6.43□□□□□ -1.38
TMEM260-211ENST00000556648 C3orf22Q8N5N4 141 aa6.43□□□□□ -1.38
TMEM260-211ENST00000556648 LRCOL1A6NCL2 159 aa6.42□□□□□ -1.38
TMEM260-211ENST00000556648 C16orf90A8MZG2 172 aa6.42□□□□□ -1.38
TMEM260-211ENST00000556648 HIST1H4AP62805 103 aaKnown RBP6.42□□□□□ -1.38
TMEM260-211ENST00000556648 PRKDCP78527 4128 aaKnown RBP6.42□□□□□ -1.38
TMEM260-211ENST00000556648 Q6ZRN7 208 aaPredicted RBP6.42□□□□□ -1.38
TMEM260-211ENST00000556648 UBL5Q9BZL1 73 aa6.42□□□□□ -1.38
TMEM260-211ENST00000556648 Q6ZVQ6 151 aa6.41□□□□□ -1.38
TMEM260-211ENST00000556648 FAM19A1Q7Z5A9 133 aa6.41□□□□□ -1.38
TMEM260-211ENST00000556648 KRTAP11-1Q8IUC1 163 aa6.41□□□□□ -1.38
TMEM260-211ENST00000556648 REG3GQ6UW15 175 aa6.4□□□□□ -1.38
TMEM260-211ENST00000556648 DHRS4-AS1Q9P1J3 65 aa6.4□□□□□ -1.38
TMEM260-211ENST00000556648 GHRHP01286 108 aa6.39□□□□□ -1.39
TMEM260-211ENST00000556648 PDE6GP18545 87 aa6.39□□□□□ -1.39
TMEM260-211ENST00000556648 UBE2BP63146 152 aa6.39□□□□□ -1.39
TMEM260-211ENST00000556648 C14orf177Q52M58 125 aa6.38□□□□□ -1.39
TMEM260-211ENST00000556648 ATP5EP2Q5VTU8 51 aa6.38□□□□□ -1.39
TMEM260-211ENST00000556648 PHF5AQ7RTV0 110 aaKnown RBP6.38□□□□□ -1.39
TMEM260-211ENST00000556648 PANO1I0J062 215 aa6.38□□□□□ -1.39
TMEM260-211ENST00000556648 FUSP35637 526 aaKnown RBP eCLIP6.38□□□□□ -1.39
TMEM260-211ENST00000556648 PRLHP81277 87 aa6.38□□□□□ -1.39
TMEM260-211ENST00000556648 TENM2Q9NT68 2774 aa6.38□□□□□ -1.39
TMEM260-211ENST00000556648 HAMPP81172 84 aa6.37□□□□□ -1.39
TMEM260-211ENST00000556648 SCXQ7RTU7 201 aa6.37□□□□□ -1.39
TMEM260-211ENST00000556648 DNHD1Q96M86 4753 aa6.37□□□□□ -1.39
TMEM260-211ENST00000556648 IGLV5-48A0A075B6I7 105 aa6.37□□□□□ -1.39
TMEM260-211ENST00000556648 C9orf163Q8N9P6 203 aa6.36□□□□□ -1.39
TMEM260-211ENST00000556648 TNP2Q05952 138 aa6.35□□□□□ -1.39
TMEM260-211ENST00000556648 MEGF8Q7Z7M0 2845 aa6.35□□□□□ -1.39
TMEM260-211ENST00000556648 C3orf84H3BNL1 204 aa6.35□□□□□ -1.39
TMEM260-211ENST00000556648 ATOX1O00244 68 aa6.34□□□□□ -1.39
TMEM260-211ENST00000556648 VPS13DQ5THJ4 4388 aa6.33□□□□□ -1.4
TMEM260-211ENST00000556648 A0A1W2PNM2 257 aa6.33□□□□□ -1.4
TMEM260-211ENST00000556648 SMIM29Q86T20 159 aa6.33□□□□□ -1.4
TMEM260-211ENST00000556648 SS18L2Q9UHA2 77 aa6.33□□□□□ -1.4
TMEM260-211ENST00000556648 A0A0G2JQZ4 141 aa6.33□□□□□ -1.4
TMEM260-211ENST00000556648 A0A087WTM6 91 aa6.32□□□□□ -1.4
TMEM260-211ENST00000556648 COX7CP15954 63 aa6.32□□□□□ -1.4
TMEM260-211ENST00000556648 C1orf137Q5JT78 98 aa6.32□□□□□ -1.4
TMEM260-211ENST00000556648 HIGD2AQ9BW72 106 aa6.32□□□□□ -1.4
TMEM260-211ENST00000556648 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.32□□□□□ -1.4
TMEM260-211ENST00000556648 CXCL6P80162 114 aa6.31□□□□□ -1.4
TMEM260-211ENST00000556648 C9orf153Q5TBE3 101 aa6.3□□□□□ -1.4
TMEM260-211ENST00000556648 Q8N9L7 120 aa6.3□□□□□ -1.4
TMEM260-211ENST00000556648 EPM2AB3EWF7 344 aa6.3□□□□□ -1.4
TMEM260-211ENST00000556648 UQCRQO14949 82 aa6.3□□□□□ -1.4
TMEM260-211ENST00000556648 Q6ZR54 194 aa6.3□□□□□ -1.4
TMEM260-211ENST00000556648 LINC00476Q8WZB0 136 aa6.29□□□□□ -1.4
TMEM260-211ENST00000556648 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
TMEM260-211ENST00000556648 Q8NBF4 154 aa6.28□□□□□ -1.4
TMEM260-211ENST00000556648 SPACA4Q8TDM5 124 aa6.28□□□□□ -1.4
TMEM260-211ENST00000556648 KMT2AQ03164 3969 aa6.28□□□□□ -1.4
TMEM260-211ENST00000556648 NREPQ16612 68 aa6.28□□□□□ -1.4
TMEM260-211ENST00000556648 SERP2Q8N6R1 65 aa6.28□□□□□ -1.4
TMEM260-211ENST00000556648 BPY2O14599 106 aa6.27□□□□□ -1.41
TMEM260-211ENST00000556648 RTL8CO15255 209 aa6.26□□□□□ -1.41
TMEM260-211ENST00000556648 DPH3Q96FX2 82 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms