RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 SPAG11BQ08648 103 aa4.15□□□□□ -1.75
CPSF2-205ENST00000556622 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.15□□□□□ -1.75
CPSF2-205ENST00000556622 SERP2Q8N6R1 65 aa4.15□□□□□ -1.75
CPSF2-205ENST00000556622 FAM218AQ96MZ4 157 aa4.15□□□□□ -1.75
CPSF2-205ENST00000556622 PRR34Q9NV39 138 aa4.15□□□□□ -1.75
CPSF2-205ENST00000556622 NDUFC2-KCTD14E9PQ53 114 aa4.14□□□□□ -1.75
CPSF2-205ENST00000556622 KIAA0087Q14695 138 aa4.14□□□□□ -1.75
CPSF2-205ENST00000556622 LINC00575Q6W349 94 aa4.14□□□□□ -1.75
CPSF2-205ENST00000556622 DIRC1Q969H9 104 aa4.14□□□□□ -1.75
CPSF2-205ENST00000556622 C2orf48Q96LS8 159 aa4.14□□□□□ -1.75
CPSF2-205ENST00000556622 C14orf132Q9NPU4 83 aa4.14□□□□□ -1.75
CPSF2-205ENST00000556622 LAMTOR3Q9UHA4 124 aa4.14□□□□□ -1.75
CPSF2-205ENST00000556622 TMEM258P61165 79 aa4.13□□□□□ -1.75
CPSF2-205ENST00000556622 HIST1H4AP62805 103 aaKnown RBP4.13□□□□□ -1.75
CPSF2-205ENST00000556622 PRR26Q8N8Z3 221 aa4.13□□□□□ -1.75
CPSF2-205ENST00000556622 WFDC10AQ9H1F0 79 aa4.13□□□□□ -1.75
CPSF2-205ENST00000556622 PRKDCP78527 4128 aaKnown RBP4.13□□□□□ -1.75
CPSF2-205ENST00000556622 CCDC179H3BU77 68 aa4.12□□□□□ -1.75
CPSF2-205ENST00000556622 M0R378 163 aa4.12□□□□□ -1.75
CPSF2-205ENST00000556622 IGLV6-57P01721 117 aa4.12□□□□□ -1.75
CPSF2-205ENST00000556622 CXCL6P80162 114 aa4.12□□□□□ -1.75
CPSF2-205ENST00000556622 DEFB135Q30KP9 77 aa4.12□□□□□ -1.75
CPSF2-205ENST00000556622 C6orf99Q4VX62 202 aa4.12□□□□□ -1.75
CPSF2-205ENST00000556622 LYPD5Q6UWN5 251 aa4.12□□□□□ -1.75
CPSF2-205ENST00000556622 RMI2Q96E14 147 aa4.12□□□□□ -1.75
CPSF2-205ENST00000556622 TM2D3Q9BRN9 247 aa4.12□□□□□ -1.75
CPSF2-205ENST00000556622 C11orf68Q9H3H3 251 aaKnown RBP4.12□□□□□ -1.75
CPSF2-205ENST00000556622 TRAV23DV6A0A075B6W5 121 aa4.11□□□□□ -1.75
CPSF2-205ENST00000556622 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
CPSF2-205ENST00000556622 J3KT08 172 aa4.11□□□□□ -1.75
CPSF2-205ENST00000556622 NDUFC1O43677 76 aa4.11□□□□□ -1.75
CPSF2-205ENST00000556622 COX7BP24311 80 aa4.11□□□□□ -1.75
CPSF2-205ENST00000556622 C6orf223Q8N319 242 aa4.11□□□□□ -1.75
CPSF2-205ENST00000556622 Q8NAQ8 132 aa4.11□□□□□ -1.75
CPSF2-205ENST00000556622 CAMK2N2Q96S95 79 aa4.11□□□□□ -1.75
CPSF2-205ENST00000556622 LINC00846Q9NV44 126 aa4.11□□□□□ -1.75
CPSF2-205ENST00000556622 SS18L2Q9UHA2 77 aa4.11□□□□□ -1.75
CPSF2-205ENST00000556622 LOC107984640A0A0U1RRK4 108 aa4.1□□□□□ -1.75
CPSF2-205ENST00000556622 USP17L23D6RBM5 183 aa4.1□□□□□ -1.75
CPSF2-205ENST00000556622 NCR3O14931 201 aa4.1□□□□□ -1.75
CPSF2-205ENST00000556622 ZNF73O43830 326 aaPredicted RBP4.1□□□□□ -1.75
CPSF2-205ENST00000556622 SMCR5Q8TEV8 140 aa4.1□□□□□ -1.75
CPSF2-205ENST00000556622 KLK12Q9UKR0 248 aa4.1□□□□□ -1.75
CPSF2-205ENST00000556622 PKIGQ9Y2B9 76 aa4.1□□□□□ -1.75
CPSF2-205ENST00000556622 DNAH3Q8TD57 4116 aa4.09□□□□□ -1.75
CPSF2-205ENST00000556622 IGLV10-54A0A075B6I4 117 aa4.09□□□□□ -1.75
CPSF2-205ENST00000556622 A0A096LPF7 62 aa4.09□□□□□ -1.75
CPSF2-205ENST00000556622 HTN3P15516 51 aa4.09□□□□□ -1.75
CPSF2-205ENST00000556622 CLPSL2Q6UWE3 100 aa4.09□□□□□ -1.75
CPSF2-205ENST00000556622 RETNQ9HD89 108 aa4.09□□□□□ -1.75
CPSF2-205ENST00000556622 C22orf24Q9Y442 160 aa4.09□□□□□ -1.75
CPSF2-205ENST00000556622 NBEAL2Q6ZNJ1 2754 aa4.09□□□□□ -1.75
CPSF2-205ENST00000556622 C3orf84H3BNL1 204 aa4.08□□□□□ -1.76
CPSF2-205ENST00000556622 ELOF1P60002 83 aaKnown RBP4.08□□□□□ -1.76
CPSF2-205ENST00000556622 COL7A1Q02388 2944 aa4.08□□□□□ -1.76
CPSF2-205ENST00000556622 UNQ6190/PRO20217Q6UXQ8 127 aa4.08□□□□□ -1.76
CPSF2-205ENST00000556622 Q6ZQT0 140 aa4.08□□□□□ -1.76
CPSF2-205ENST00000556622 DNAH9Q9NYC9 4486 aa4.08□□□□□ -1.76
CPSF2-205ENST00000556622 DHRS4-AS1Q9P1J3 65 aa4.08□□□□□ -1.76
CPSF2-205ENST00000556622 TRAV7A0A075B6U4 112 aa4.07□□□□□ -1.76
CPSF2-205ENST00000556622 IGKV3D-7A0A0C4DH55 119 aa4.07□□□□□ -1.76
CPSF2-205ENST00000556622 ATP5EP56381 51 aaPredicted RBP4.07□□□□□ -1.76
CPSF2-205ENST00000556622 LINC01556Q5JQF7 62 aa4.07□□□□□ -1.76
CPSF2-205ENST00000556622 ENHOQ6UWT2 76 aa4.07□□□□□ -1.76
CPSF2-205ENST00000556622 NKAPP1Q8N9T2 125 aa4.07□□□□□ -1.76
CPSF2-205ENST00000556622 UPK3BQ9BT76 320 aa4.07□□□□□ -1.76
CPSF2-205ENST00000556622 HIGD2BQ4VC39 106 aa4.06□□□□□ -1.76
CPSF2-205ENST00000556622 Q6ZQY7 126 aa4.06□□□□□ -1.76
CPSF2-205ENST00000556622 TENM3Q9P273 2699 aa4.05□□□□□ -1.76
CPSF2-205ENST00000556622 ERC2-IT1O76042 136 aa4.05□□□□□ -1.76
CPSF2-205ENST00000556622 TLX1NBP0CAT3 122 aa4.05□□□□□ -1.76
CPSF2-205ENST00000556622 FUSP35637 526 aaKnown RBP eCLIP4.05□□□□□ -1.76
CPSF2-205ENST00000556622 HAMPP81172 84 aa4.05□□□□□ -1.76
CPSF2-205ENST00000556622 SYCNQ0VAF6 134 aa4.05□□□□□ -1.76
CPSF2-205ENST00000556622 CASC10Q5T4H9 136 aa4.05□□□□□ -1.76
CPSF2-205ENST00000556622 C11orf45Q8TAV5 145 aa4.05□□□□□ -1.76
CPSF2-205ENST00000556622 STAB2Q8WWQ8 2551 aa4.05□□□□□ -1.76
CPSF2-205ENST00000556622 TRAV10A0A0B4J240 114 aa4.04□□□□□ -1.76
CPSF2-205ENST00000556622 TRBV7-4A0A0J9YYF1 115 aa4.04□□□□□ -1.76
CPSF2-205ENST00000556622 DEFB4AO15263 64 aa4.04□□□□□ -1.76
CPSF2-205ENST00000556622 LINC01547P58512 204 aaPredicted RBP4.04□□□□□ -1.76
CPSF2-205ENST00000556622 PRR3P79522 188 aaKnown RBP4.04□□□□□ -1.76
CPSF2-205ENST00000556622 NREPQ16612 68 aa4.04□□□□□ -1.76
CPSF2-205ENST00000556622 C6orf48Q9UBA6 75 aa4.04□□□□□ -1.76
CPSF2-205ENST00000556622 HUWE1Q7Z6Z7 4374 aaKnown RBP4.03□□□□□ -1.76
CPSF2-205ENST00000556622 DEFB131BA0A096LNP1 70 aa4.03□□□□□ -1.76
CPSF2-205ENST00000556622 DNAH10OSP0CZ25 163 aa4.03□□□□□ -1.76
CPSF2-205ENST00000556622 VPREB1P12018 145 aa4.03□□□□□ -1.76
CPSF2-205ENST00000556622 C9orf116Q5BN46 136 aaPredicted RBP4.03□□□□□ -1.76
CPSF2-205ENST00000556622 Q6ZVQ6 151 aa4.03□□□□□ -1.76
CPSF2-205ENST00000556622 KCNQ1DNQ9H478 68 aa4.03□□□□□ -1.76
CPSF2-205ENST00000556622 CELA1Q9UNI1 258 aa4.03□□□□□ -1.76
CPSF2-205ENST00000556622 IGKV2D-24A0A075B6R9 120 aa4.02□□□□□ -1.77
CPSF2-205ENST00000556622 RPL37AP8A6NKH3 93 aa4.02□□□□□ -1.77
CPSF2-205ENST00000556622 IGLV5-37A0A075B6J1 123 aa4.01□□□□□ -1.77
CPSF2-205ENST00000556622 ETDCA0A1B0GVM5 59 aa4.01□□□□□ -1.77
CPSF2-205ENST00000556622 KLKP1Q107X0 134 aa4.01□□□□□ -1.77
CPSF2-205ENST00000556622 C14orf177Q52M58 125 aa4.01□□□□□ -1.77
CPSF2-205ENST00000556622 XAGE1AQ9HD64 81 aa4.01□□□□□ -1.77
CPSF2-205ENST00000556622 IGLV5-52A0A0A0MRZ9 124 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms