RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 IGIPA6NJ69 53 aa3.17□□□□□ -1.9
NEK9-207ENST00000555763 SYS1-DBNDD2H3BUS1 97 aa3.17□□□□□ -1.9
NEK9-207ENST00000555763 SMIM6P0DI80 62 aa3.17□□□□□ -1.9
NEK9-207ENST00000555763 KRTDAPP60985 99 aa3.17□□□□□ -1.9
NEK9-207ENST00000555763 RPL39P62891 51 aaKnown RBP3.17□□□□□ -1.9
NEK9-207ENST00000555763 KRTAP19-6Q3LI70 58 aa3.17□□□□□ -1.9
NEK9-207ENST00000555763 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
NEK9-207ENST00000555763 MPV17L2Q567V2 206 aa3.17□□□□□ -1.9
NEK9-207ENST00000555763 SCGB3A1Q96QR1 104 aa3.17□□□□□ -1.9
NEK9-207ENST00000555763 TIMM21Q9BVV7 248 aa3.17□□□□□ -1.9
NEK9-207ENST00000555763 TRBV25-1A0A075B6N4 114 aa3.16□□□□□ -1.9
NEK9-207ENST00000555763 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.16□□□□□ -1.9
NEK9-207ENST00000555763 TRBV6-8A0A0A6YYG3 113 aa3.16□□□□□ -1.9
NEK9-207ENST00000555763 TRAV12-1A0A0B4J245 112 aa3.16□□□□□ -1.9
NEK9-207ENST00000555763 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
NEK9-207ENST00000555763 IGKV2-29A2NJV5 120 aaPredicted RBP3.16□□□□□ -1.9
NEK9-207ENST00000555763 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.16□□□□□ -1.9
NEK9-207ENST00000555763 TLX1NBP0CAT3 122 aa3.16□□□□□ -1.9
NEK9-207ENST00000555763 LINC01545Q5VT33 79 aa3.16□□□□□ -1.9
NEK9-207ENST00000555763 TMEM141Q96I45 108 aa3.16□□□□□ -1.9
NEK9-207ENST00000555763 SPANXA1Q9NS26 97 aa3.16□□□□□ -1.9
NEK9-207ENST00000555763 UBE2D4Q9Y2X8 147 aa3.16□□□□□ -1.9
NEK9-207ENST00000555763 C20orf202A1L168 122 aa3.15□□□□□ -1.91
NEK9-207ENST00000555763 ANGP03950 147 aaKnown RBP3.15□□□□□ -1.91
NEK9-207ENST00000555763 ZNF25P17030 456 aaPredicted RBP3.15□□□□□ -1.91
NEK9-207ENST00000555763 MRPS36P82909 103 aaKnown RBP3.15□□□□□ -1.91
NEK9-207ENST00000555763 C15orf56Q8N910 161 aa3.15□□□□□ -1.91
NEK9-207ENST00000555763 AMELXQ99217 191 aa3.15□□□□□ -1.91
NEK9-207ENST00000555763 LINC00846Q9NV44 126 aa3.15□□□□□ -1.91
NEK9-207ENST00000555763 UBE2L6O14933 153 aa3.14□□□□□ -1.91
NEK9-207ENST00000555763 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
NEK9-207ENST00000555763 FGF6P10767 208 aa3.14□□□□□ -1.91
NEK9-207ENST00000555763 PKIAP61925 76 aa3.14□□□□□ -1.91
NEK9-207ENST00000555763 SS18Q15532 418 aa3.14□□□□□ -1.91
NEK9-207ENST00000555763 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
NEK9-207ENST00000555763 CLPSL2Q6UWE3 100 aa3.14□□□□□ -1.91
NEK9-207ENST00000555763 Q6ZUT4 128 aa3.14□□□□□ -1.91
NEK9-207ENST00000555763 PCP2Q8IVA1 136 aa3.14□□□□□ -1.91
NEK9-207ENST00000555763 ORAOV1Q8WV07 137 aa3.14□□□□□ -1.91
NEK9-207ENST00000555763 C12orf57Q99622 126 aa3.14□□□□□ -1.91
NEK9-207ENST00000555763 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
NEK9-207ENST00000555763 MRPL35Q9NZE8 188 aaKnown RBP3.14□□□□□ -1.91
NEK9-207ENST00000555763 IGLV4-69A0A075B6H9 119 aa3.13□□□□□ -1.91
NEK9-207ENST00000555763 IGLV4-60A0A075B6I1 120 aa3.13□□□□□ -1.91
NEK9-207ENST00000555763 F8VRH5 84 aa3.13□□□□□ -1.91
NEK9-207ENST00000555763 DPM2O94777 84 aa3.13□□□□□ -1.91
NEK9-207ENST00000555763 AMMECR1LQ6DCA0 310 aa3.13□□□□□ -1.91
NEK9-207ENST00000555763 FAM19A3Q7Z5A8 133 aa3.13□□□□□ -1.91
NEK9-207ENST00000555763 OR5A1Q8NGJ0 315 aa3.13□□□□□ -1.91
NEK9-207ENST00000555763 PMCHL2Q9BQD1 86 aa3.13□□□□□ -1.91
NEK9-207ENST00000555763 CST9LQ9H4G1 147 aa3.13□□□□□ -1.91
NEK9-207ENST00000555763 C8orf17Q9NRJ1 99 aa3.13□□□□□ -1.91
NEK9-207ENST00000555763 CDC42SE2Q9NRR3 84 aa3.13□□□□□ -1.91
NEK9-207ENST00000555763 PKIGQ9Y2B9 76 aa3.13□□□□□ -1.91
NEK9-207ENST00000555763 A0A1W2PNN7 141 aa3.12□□□□□ -1.91
NEK9-207ENST00000555763 IGKCP01834 107 aa3.12□□□□□ -1.91
NEK9-207ENST00000555763 IGLC3P0DOY3 106 aa3.12□□□□□ -1.91
NEK9-207ENST00000555763 PLNP26678 52 aa3.12□□□□□ -1.91
NEK9-207ENST00000555763 RBX1P62877 108 aa3.12□□□□□ -1.91
NEK9-207ENST00000555763 RNASE13Q5GAN3 156 aaKnown RBP3.12□□□□□ -1.91
NEK9-207ENST00000555763 FP248Q71RG6 208 aaPredicted RBP3.12□□□□□ -1.91
NEK9-207ENST00000555763 ATOH7Q8N100 152 aa3.12□□□□□ -1.91
NEK9-207ENST00000555763 ANAPC13Q9BS18 74 aa3.12□□□□□ -1.91
NEK9-207ENST00000555763 C2orf88Q9BSF0 95 aa3.12□□□□□ -1.91
NEK9-207ENST00000555763 SND1-IT1Q9HBX3 110 aa3.12□□□□□ -1.91
NEK9-207ENST00000555763 C11orf86A6NJI1 115 aa3.11□□□□□ -1.91
NEK9-207ENST00000555763 TMEM262E9PQX1 116 aa3.11□□□□□ -1.91
NEK9-207ENST00000555763 BPY2O14599 106 aa3.11□□□□□ -1.91
NEK9-207ENST00000555763 ZNF22P17026 224 aaPredicted RBP3.11□□□□□ -1.91
NEK9-207ENST00000555763 SEC11AP67812 179 aa3.11□□□□□ -1.91
NEK9-207ENST00000555763 C1orf195Q5TG92 126 aa3.11□□□□□ -1.91
NEK9-207ENST00000555763 PHF5AQ7RTV0 110 aaKnown RBP3.11□□□□□ -1.91
NEK9-207ENST00000555763 KRTAP11-1Q8IUC1 163 aa3.11□□□□□ -1.91
NEK9-207ENST00000555763 LINC00269Q8N2A0 174 aa3.11□□□□□ -1.91
NEK9-207ENST00000555763 VAMP8Q9BV40 100 aa3.11□□□□□ -1.91
NEK9-207ENST00000555763 ZNF706Q9Y5V0 76 aaPredicted RBP3.11□□□□□ -1.91
NEK9-207ENST00000555763 GVQW2A0A096LPI5 108 aaPredicted RBP3.1□□□□□ -1.91
NEK9-207ENST00000555763 LINC00959A0A1B0GUT2 108 aa3.1□□□□□ -1.91
NEK9-207ENST00000555763 CCL25O15444 150 aa3.1□□□□□ -1.91
NEK9-207ENST00000555763 SYCNQ0VAF6 134 aa3.1□□□□□ -1.91
NEK9-207ENST00000555763 SPATA45Q537H7 98 aa3.1□□□□□ -1.91
NEK9-207ENST00000555763 LINC00304Q8N9R0 145 aa3.1□□□□□ -1.91
NEK9-207ENST00000555763 TRAV13-1A0A0B4J241 112 aa3.09□□□□□ -1.91
NEK9-207ENST00000555763 TMEM223A0PJW6 202 aa3.09□□□□□ -1.91
NEK9-207ENST00000555763 SCGB1C2P0DMR2 95 aa3.09□□□□□ -1.91
NEK9-207ENST00000555763 MP68P56378 58 aa3.09□□□□□ -1.91
NEK9-207ENST00000555763 HERVK_113P63121 156 aa3.09□□□□□ -1.91
NEK9-207ENST00000555763 TMEM170BQ5T4T1 132 aa3.09□□□□□ -1.91
NEK9-207ENST00000555763 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
NEK9-207ENST00000555763 IGKV2D-26A0A0A0MRZ7 120 aa3.08□□□□□ -1.92
NEK9-207ENST00000555763 IGKV3OR2-268A0A0C4DH90 116 aa3.08□□□□□ -1.92
NEK9-207ENST00000555763 TSTD3H0UI37 97 aa3.08□□□□□ -1.92
NEK9-207ENST00000555763 H3BRM9 83 aa3.08□□□□□ -1.92
NEK9-207ENST00000555763 LEPROTO15243 131 aa3.08□□□□□ -1.92
NEK9-207ENST00000555763 ZNF861PO60384 105 aa3.08□□□□□ -1.92
NEK9-207ENST00000555763 COX8AP10176 69 aa3.08□□□□□ -1.92
NEK9-207ENST00000555763 KRTAP13-2Q52LG2 175 aa3.08□□□□□ -1.92
NEK9-207ENST00000555763 C9orf116Q5BN46 136 aaPredicted RBP3.08□□□□□ -1.92
NEK9-207ENST00000555763 PRO1933Q9H354 126 aa3.08□□□□□ -1.92
NEK9-207ENST00000555763 CDKN2A-AS1Q9UH64 79 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms