RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 KRTAP26-1Q6PEX3 210 aa9.84□□□□□ -0.83
XRCC3-211ENST00000555055 LINC01547P58512 204 aaPredicted RBP9.83□□□□□ -0.84
XRCC3-211ENST00000555055 CAMK2N2Q96S95 79 aa9.83□□□□□ -0.84
XRCC3-211ENST00000555055 H3BNG1 76 aa9.83□□□□□ -0.84
XRCC3-211ENST00000555055 Q6ZRU5 148 aa9.83□□□□□ -0.84
XRCC3-211ENST00000555055 C15orf56Q8N910 161 aa9.83□□□□□ -0.84
XRCC3-211ENST00000555055 DNAH7Q8WXX0 4024 aa9.82□□□□□ -0.84
XRCC3-211ENST00000555055 MDFIQ99750 246 aa9.82□□□□□ -0.84
XRCC3-211ENST00000555055 CASC10Q5T4H9 136 aa9.81□□□□□ -0.84
XRCC3-211ENST00000555055 Q6ZVQ6 151 aa9.81□□□□□ -0.84
XRCC3-211ENST00000555055 C1orf43Q9BWL3 253 aa9.81□□□□□ -0.84
XRCC3-211ENST00000555055 IGLV6-57P01721 117 aa9.81□□□□□ -0.84
XRCC3-211ENST00000555055 LINC00588Q9Y4M8 146 aa9.8□□□□□ -0.84
XRCC3-211ENST00000555055 NDUFC1O43677 76 aa9.8□□□□□ -0.84
XRCC3-211ENST00000555055 LAMTOR3Q9UHA4 124 aa9.79□□□□□ -0.84
XRCC3-211ENST00000555055 DNAH9Q9NYC9 4486 aa9.79□□□□□ -0.84
XRCC3-211ENST00000555055 PRO0628Q9UI54 55 aa9.78□□□□□ -0.84
XRCC3-211ENST00000555055 ATP5EP56381 51 aaPredicted RBP9.78□□□□□ -0.84
XRCC3-211ENST00000555055 TM2D3Q9BRN9 247 aa9.78□□□□□ -0.84
XRCC3-211ENST00000555055 LINC01556Q5JQF7 62 aa9.77□□□□□ -0.84
XRCC3-211ENST00000555055 DNAH1Q9P2D7 4330 aa9.77□□□□□ -0.85
XRCC3-211ENST00000555055 TRAV10A0A0B4J240 114 aa9.76□□□□□ -0.85
XRCC3-211ENST00000555055 LINC00336Q6ZUF6 198 aa9.76□□□□□ -0.85
XRCC3-211ENST00000555055 GVQW2A0A096LPI5 108 aaPredicted RBP9.75□□□□□ -0.85
XRCC3-211ENST00000555055 TRBV7-4A0A0J9YYF1 115 aa9.75□□□□□ -0.85
XRCC3-211ENST00000555055 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.75□□□□□ -0.85
XRCC3-211ENST00000555055 Q6ZRP5 223 aa9.75□□□□□ -0.85
XRCC3-211ENST00000555055 TRBV7-6A0A0J9YX20 115 aa9.74□□□□□ -0.85
XRCC3-211ENST00000555055 HAMPP81172 84 aa9.74□□□□□ -0.85
XRCC3-211ENST00000555055 ERC2-IT1O76042 136 aa9.74□□□□□ -0.85
XRCC3-211ENST00000555055 Q6ZQY7 126 aa9.74□□□□□ -0.85
XRCC3-211ENST00000555055 M0R2N4 97 aa9.73□□□□□ -0.85
XRCC3-211ENST00000555055 SMIM26A0A096LP01 95 aa9.73□□□□□ -0.85
XRCC3-211ENST00000555055 DIRC1Q969H9 104 aa9.72□□□□□ -0.85
XRCC3-211ENST00000555055 DNAH10OSP0CZ25 163 aa9.71□□□□□ -0.85
XRCC3-211ENST00000555055 DNHD1Q96M86 4753 aa9.71□□□□□ -0.86
XRCC3-211ENST00000555055 PLECQ15149 4684 aaKnown RBP9.71□□□□□ -0.86
XRCC3-211ENST00000555055 VPREB1P12018 145 aa9.69□□□□□ -0.86
XRCC3-211ENST00000555055 F8WEM9 126 aa9.69□□□□□ -0.86
XRCC3-211ENST00000555055 SYCNQ0VAF6 134 aa9.69□□□□□ -0.86
XRCC3-211ENST00000555055 RMI2Q96E14 147 aa9.69□□□□□ -0.86
XRCC3-211ENST00000555055 PRKDCP78527 4128 aaKnown RBP9.68□□□□□ -0.86
XRCC3-211ENST00000555055 ELOF1P60002 83 aaKnown RBP9.68□□□□□ -0.86
XRCC3-211ENST00000555055 F8WDY8 70 aa9.68□□□□□ -0.86
XRCC3-211ENST00000555055 PKIGQ9Y2B9 76 aa9.68□□□□□ -0.86
XRCC3-211ENST00000555055 FAM168BA1KXE4 195 aa9.67□□□□□ -0.86
XRCC3-211ENST00000555055 COX7BP24311 80 aa9.67□□□□□ -0.86
XRCC3-211ENST00000555055 SERTAD4-AS1Q5TG53 156 aa9.67□□□□□ -0.86
XRCC3-211ENST00000555055 KRTAP1-5Q9BYS1 174 aa9.67□□□□□ -0.86
XRCC3-211ENST00000555055 SNURFQ9Y675 71 aa9.67□□□□□ -0.86
XRCC3-211ENST00000555055 ZNF73O43830 326 aaPredicted RBP9.66□□□□□ -0.86
XRCC3-211ENST00000555055 NREPQ16612 68 aa9.65□□□□□ -0.87
XRCC3-211ENST00000555055 FP248Q71RG6 208 aaPredicted RBP9.65□□□□□ -0.87
XRCC3-211ENST00000555055 STARD9Q9P2P6 4700 aa9.63□□□□□ -0.87
XRCC3-211ENST00000555055 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
XRCC3-211ENST00000555055 TMEM254Q8TBM7 123 aa9.62□□□□□ -0.87
XRCC3-211ENST00000555055 MEGF8Q7Z7M0 2845 aa9.62□□□□□ -0.87
XRCC3-211ENST00000555055 BPY2O14599 106 aa9.62□□□□□ -0.87
XRCC3-211ENST00000555055 M0R378 163 aa9.59□□□□□ -0.87
XRCC3-211ENST00000555055 LINC00528Q8N1L1 170 aa9.59□□□□□ -0.87
XRCC3-211ENST00000555055 SRRM2Q9UQ35 2752 aaKnown RBP9.58□□□□□ -0.88
XRCC3-211ENST00000555055 IGKV4-1P06312 121 aa9.58□□□□□ -0.88
XRCC3-211ENST00000555055 NKAPP1Q8N9T2 125 aa9.58□□□□□ -0.88
XRCC3-211ENST00000555055 C7orf33Q8WU49 177 aa9.58□□□□□ -0.88
XRCC3-211ENST00000555055 OCR1Q9BZK8 76 aa9.58□□□□□ -0.88
XRCC3-211ENST00000555055 A0A0U1RQV1 116 aa9.57□□□□□ -0.88
XRCC3-211ENST00000555055 A0A1B0GW54 56 aa9.57□□□□□ -0.88
XRCC3-211ENST00000555055 SCXQ7RTU7 201 aa9.57□□□□□ -0.88
XRCC3-211ENST00000555055 KRTAP7-1Q8IUC3 87 aa9.57□□□□□ -0.88
XRCC3-211ENST00000555055 UBE2DNLQ8IWF7 75 aa9.57□□□□□ -0.88
XRCC3-211ENST00000555055 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.56□□□□□ -0.88
XRCC3-211ENST00000555055 LINC00474Q9P2X8 69 aa9.56□□□□□ -0.88
XRCC3-211ENST00000555055 PRYO14603 147 aa9.55□□□□□ -0.88
XRCC3-211ENST00000555055 BRK1Q8WUW1 75 aa9.55□□□□□ -0.88
XRCC3-211ENST00000555055 IGKV2-24A0A0C4DH68 120 aa9.54□□□□□ -0.88
XRCC3-211ENST00000555055 DEFB105AQ8NG35 78 aa9.54□□□□□ -0.88
XRCC3-211ENST00000555055 TGP01266 2768 aa9.53□□□□□ -0.88
XRCC3-211ENST00000555055 V9GYY9 64 aa9.53□□□□□ -0.88
XRCC3-211ENST00000555055 SEC61GP60059 68 aa9.53□□□□□ -0.88
XRCC3-211ENST00000555055 C1orf195Q5TG92 126 aa9.53□□□□□ -0.88
XRCC3-211ENST00000555055 PSCAO43653 123 aa9.52□□□□□ -0.89
XRCC3-211ENST00000555055 APLNQ9ULZ1 77 aa9.52□□□□□ -0.89
XRCC3-211ENST00000555055 KMT2AQ03164 3969 aa9.52□□□□□ -0.89
XRCC3-211ENST00000555055 DYNC2H1Q8NCM8 4307 aaKnown RBP9.51□□□□□ -0.89
XRCC3-211ENST00000555055 B9D2Q9BPU9 175 aa9.5□□□□□ -0.89
XRCC3-211ENST00000555055 LCE6AA0A183 80 aa9.5□□□□□ -0.89
XRCC3-211ENST00000555055 IGLV5-48A0A075B6I7 105 aa9.49□□□□□ -0.89
XRCC3-211ENST00000555055 FUSP35637 526 aaKnown RBP eCLIP9.49□□□□□ -0.892e-6■■■□□ 17.8
XRCC3-211ENST00000555055 CHTF8P0CG12 524 aa9.47□□□□□ -0.89
XRCC3-211ENST00000555055 A0A096LNI7 61 aa9.47□□□□□ -0.89
XRCC3-211ENST00000555055 TLX1NBP0CAT3 122 aa9.47□□□□□ -0.89
XRCC3-211ENST00000555055 KCNQ1DNQ9H478 68 aa9.47□□□□□ -0.89
XRCC3-211ENST00000555055 Q8N9L7 120 aa9.46□□□□□ -0.9
XRCC3-211ENST00000555055 ST20-AS1Q8NBB2 130 aa9.46□□□□□ -0.9
XRCC3-211ENST00000555055 Q9BRP9 147 aa9.45□□□□□ -0.9
XRCC3-211ENST00000555055 IGLV1-50A0A075B6I6 118 aa9.44□□□□□ -0.9
XRCC3-211ENST00000555055 MRPL55Q7Z7F7 128 aaKnown RBP9.44□□□□□ -0.9
XRCC3-211ENST00000555055 A0A1W2PNN7 141 aa9.43□□□□□ -0.9
XRCC3-211ENST00000555055 MPLKIPQ8TAP9 179 aa9.43□□□□□ -0.9
XRCC3-211ENST00000555055 FAM229BQ4G0N7 80 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms