RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 S100A7L2Q5SY68 101 aa9.93□□□□□ -0.82
PRKCH-210ENST00000554835 MT1HP80294 61 aa9.92□□□□□ -0.82
PRKCH-210ENST00000554835 ZNF73O43830 326 aaPredicted RBP9.91□□□□□ -0.82
PRKCH-210ENST00000554835 JOSD1Q15040 202 aaPredicted RBP9.91□□□□□ -0.82
PRKCH-210ENST00000554835 ADAMTSL4-AS1Q5T5F5 129 aa9.91□□□□□ -0.82
PRKCH-210ENST00000554835 PMCHL2Q9BQD1 86 aa9.91□□□□□ -0.82
PRKCH-210ENST00000554835 MIEN1Q9BRT3 115 aa9.91□□□□□ -0.82
PRKCH-210ENST00000554835 LEPROTL1O95214 131 aa9.9□□□□□ -0.82
PRKCH-210ENST00000554835 PLNP26678 52 aa9.9□□□□□ -0.82
PRKCH-210ENST00000554835 NPC2P61916 151 aa9.9□□□□□ -0.82
PRKCH-210ENST00000554835 NMUP48645 174 aa9.89□□□□□ -0.83
PRKCH-210ENST00000554835 PCOTHQ58A44 107 aa9.89□□□□□ -0.83
PRKCH-210ENST00000554835 SERF1AO75920 110 aa9.88□□□□□ -0.83
PRKCH-210ENST00000554835 DPM2O94777 84 aa9.87□□□□□ -0.83
PRKCH-210ENST00000554835 LGALS3P17931 250 aaKnown RBP9.87□□□□□ -0.83
PRKCH-210ENST00000554835 NDUFA5Q16718 116 aa9.87□□□□□ -0.83
PRKCH-210ENST00000554835 A0A0J9YXY3 114 aa9.86□□□□□ -0.83
PRKCH-210ENST00000554835 TRGC2P03986 189 aa9.86□□□□□ -0.83
PRKCH-210ENST00000554835 SPRR1BP22528 89 aa9.86□□□□□ -0.83
PRKCH-210ENST00000554835 HRCT1Q6UXD1 115 aa9.86□□□□□ -0.83
PRKCH-210ENST00000554835 IGLV8-61A0A075B6I0 122 aa9.85□□□□□ -0.83
PRKCH-210ENST00000554835 C9orf92A6NGG3 77 aa9.85□□□□□ -0.83
PRKCH-210ENST00000554835 C5orf52A6NGY3 159 aa9.85□□□□□ -0.83
PRKCH-210ENST00000554835 IGKCP01834 107 aa9.85□□□□□ -0.83
PRKCH-210ENST00000554835 HERVK_113P61574 105 aa9.85□□□□□ -0.83
PRKCH-210ENST00000554835 FABP4P15090 132 aa9.84□□□□□ -0.83
PRKCH-210ENST00000554835 LITAFQ99732 161 aa9.81□□□□□ -0.84
PRKCH-210ENST00000554835 LIMD2Q9BT23 127 aa9.81□□□□□ -0.84
PRKCH-210ENST00000554835 HSPB8Q9UJY1 196 aa9.81□□□□□ -0.84
PRKCH-210ENST00000554835 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
PRKCH-210ENST00000554835 FLGP20930 4061 aaPredicted RBP9.8□□□□□ -0.84
PRKCH-210ENST00000554835 E9PLD3 99 aa9.79□□□□□ -0.84
PRKCH-210ENST00000554835 HINT1P49773 126 aaPredicted RBP9.78□□□□□ -0.84
PRKCH-210ENST00000554835 LINC00308Q8TCZ7 52 aa9.78□□□□□ -0.84
PRKCH-210ENST00000554835 KRTAP10-6P60371 365 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-210ENST00000554835 SPANXCQ9NY87 97 aa9.77□□□□□ -0.85
PRKCH-210ENST00000554835 DHRS4-AS1Q9P1J3 65 aa9.77□□□□□ -0.85
PRKCH-210ENST00000554835 CFC1BP0CG36 223 aa9.76□□□□□ -0.85
PRKCH-210ENST00000554835 SLC25A34Q6PIV7 304 aa9.76□□□□□ -0.85
PRKCH-210ENST00000554835 OR13C6PQ8NH95 151 aa9.76□□□□□ -0.85
PRKCH-210ENST00000554835 LAMTOR3Q9UHA4 124 aa9.76□□□□□ -0.85
PRKCH-210ENST00000554835 CBY1Q9Y3M2 126 aa9.75□□□□□ -0.85
PRKCH-210ENST00000554835 ELOF1P60002 83 aaKnown RBP9.74□□□□□ -0.85
PRKCH-210ENST00000554835 Q1RN00 199 aa9.74□□□□□ -0.85
PRKCH-210ENST00000554835 H7C2G1 150 aa9.73□□□□□ -0.85
PRKCH-210ENST00000554835 CD164Q04900 197 aa9.73□□□□□ -0.85
PRKCH-210ENST00000554835 SPANXDQ9BXN6 97 aa9.72□□□□□ -0.85
PRKCH-210ENST00000554835 TIMM17BO60830 172 aa9.71□□□□□ -0.86
PRKCH-210ENST00000554835 C6orf99Q4VX62 202 aa9.71□□□□□ -0.86
PRKCH-210ENST00000554835 DEFB105AQ8NG35 78 aa9.71□□□□□ -0.86
PRKCH-210ENST00000554835 COX7BP24311 80 aa9.7□□□□□ -0.86
PRKCH-210ENST00000554835 C1orf195Q5TG92 126 aa9.7□□□□□ -0.86
PRKCH-210ENST00000554835 SMIM29Q86T20 159 aa9.7□□□□□ -0.86
PRKCH-210ENST00000554835 A0A0G2JQZ4 141 aa9.69□□□□□ -0.86
PRKCH-210ENST00000554835 TAL2Q16559 108 aa9.69□□□□□ -0.86
PRKCH-210ENST00000554835 Q5XG85 94 aa9.69□□□□□ -0.86
PRKCH-210ENST00000554835 TTTY13Q9BZ97 58 aa9.69□□□□□ -0.86
PRKCH-210ENST00000554835 PRO1933Q9H354 126 aa9.69□□□□□ -0.86
PRKCH-210ENST00000554835 TEX49A0A1B0GTD5 131 aa9.67□□□□□ -0.86
PRKCH-210ENST00000554835 COLCA2A8K830 154 aa9.67□□□□□ -0.86
PRKCH-210ENST00000554835 SYS1-DBNDD2H3BUS1 97 aa9.67□□□□□ -0.86
PRKCH-210ENST00000554835 RPL37P61927 97 aaKnown RBP9.66□□□□□ -0.86
PRKCH-210ENST00000554835 ZNF815PA8K554 130 aa9.65□□□□□ -0.86
PRKCH-210ENST00000554835 AKR1D1P51857 326 aa9.64□□□□□ -0.87
PRKCH-210ENST00000554835 LINC01545Q5VT33 79 aa9.64□□□□□ -0.87
PRKCH-210ENST00000554835 LINC00518Q8N0U6 118 aa9.63□□□□□ -0.87
PRKCH-210ENST00000554835 IGLV5-48A0A075B6I7 105 aa9.62□□□□□ -0.87
PRKCH-210ENST00000554835 TRBV7-6A0A0J9YX20 115 aa9.62□□□□□ -0.87
PRKCH-210ENST00000554835 M0R2T5 61 aa9.62□□□□□ -0.87
PRKCH-210ENST00000554835 A0A1B0GWB2 263 aa9.58□□□□□ -0.88
PRKCH-210ENST00000554835 PET117Q6UWS5 81 aa9.58□□□□□ -0.88
PRKCH-210ENST00000554835 COX6B2Q6YFQ2 88 aa9.58□□□□□ -0.88
PRKCH-210ENST00000554835 HIST1H2BKO60814 126 aa9.57□□□□□ -0.88
PRKCH-210ENST00000554835 HIST1H2BJP06899 126 aa9.57□□□□□ -0.88
PRKCH-210ENST00000554835 HIST1H2BOP23527 126 aa9.57□□□□□ -0.88
PRKCH-210ENST00000554835 HIST1H2BBP33778 126 aa9.57□□□□□ -0.88
PRKCH-210ENST00000554835 HIST1H2BDP58876 126 aa9.57□□□□□ -0.88
PRKCH-210ENST00000554835 HIST1H2BCP62807 126 aa9.57□□□□□ -0.88
PRKCH-210ENST00000554835 HIST2H2BEQ16778 126 aa9.57□□□□□ -0.88
PRKCH-210ENST00000554835 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.57□□□□□ -0.88
PRKCH-210ENST00000554835 HIST1H2BHQ93079 126 aa9.57□□□□□ -0.88
PRKCH-210ENST00000554835 HIST1H2BNQ99877 126 aa9.57□□□□□ -0.88
PRKCH-210ENST00000554835 HIST1H2BMQ99879 126 aa9.57□□□□□ -0.88
PRKCH-210ENST00000554835 LCE2BO14633 110 aa9.55□□□□□ -0.88
PRKCH-210ENST00000554835 A6NDN8 102 aa9.53□□□□□ -0.88
PRKCH-210ENST00000554835 C3orf79P0CE67 100 aa9.53□□□□□ -0.88
PRKCH-210ENST00000554835 SLC7A5P1Q8MH63 180 aa9.53□□□□□ -0.88
PRKCH-210ENST00000554835 SCGB1D4Q6XE38 83 aa9.51□□□□□ -0.89
PRKCH-210ENST00000554835 ANKRD39Q53RE8 183 aa9.5□□□□□ -0.89
PRKCH-210ENST00000554835 MUSTN1Q8IVN3 82 aa9.5□□□□□ -0.89
PRKCH-210ENST00000554835 TCL1BO95988 128 aa9.49□□□□□ -0.89
PRKCH-210ENST00000554835 IFITM1P13164 125 aa9.49□□□□□ -0.89
PRKCH-210ENST00000554835 SMIM11BQ8TCY0 68 aa9.49□□□□□ -0.89
PRKCH-210ENST00000554835 A4D1N5 150 aa9.48□□□□□ -0.89
PRKCH-210ENST00000554835 PCP2Q8IVA1 136 aa9.46□□□□□ -0.9
PRKCH-210ENST00000554835 KRTDAPP60985 99 aa9.45□□□□□ -0.9
PRKCH-210ENST00000554835 Q6ZVH6 145 aa9.45□□□□□ -0.9
PRKCH-210ENST00000554835 COPS9Q8WXC6 57 aa9.45□□□□□ -0.9
PRKCH-210ENST00000554835 NHP2Q9NX24 153 aaKnown RBP9.45□□□□□ -0.9
PRKCH-210ENST00000554835 TRAV13-2A0A0B4J235 113 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms