RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 CSMD3Q7Z407 3707 aa6.32□□□□□ -1.4
SYNE2-213ENST00000554805 FAM236DA0A1B0GTK5 79 aa6.31□□□□□ -1.4
SYNE2-213ENST00000554805 FAM236CP0DP71 79 aa6.31□□□□□ -1.4
SYNE2-213ENST00000554805 SYCNQ0VAF6 134 aa6.3□□□□□ -1.4
SYNE2-213ENST00000554805 NREPQ16612 68 aa6.3□□□□□ -1.4
SYNE2-213ENST00000554805 ESRGQ1W209 222 aa6.3□□□□□ -1.4
SYNE2-213ENST00000554805 C3orf84H3BNL1 204 aa6.3□□□□□ -1.4
SYNE2-213ENST00000554805 Q8N9L7 120 aa6.3□□□□□ -1.4
SYNE2-213ENST00000554805 RMI2Q96E14 147 aa6.3□□□□□ -1.4
SYNE2-213ENST00000554805 TENM2Q9NT68 2774 aa6.3□□□□□ -1.4
SYNE2-213ENST00000554805 TRBV7-4A0A0J9YYF1 115 aa6.29□□□□□ -1.4
SYNE2-213ENST00000554805 CXCL6P80162 114 aa6.29□□□□□ -1.4
SYNE2-213ENST00000554805 C15orf56Q8N910 161 aa6.29□□□□□ -1.4
SYNE2-213ENST00000554805 Q6ZRP5 223 aa6.29□□□□□ -1.4
SYNE2-213ENST00000554805 DEFB131BA0A096LNP1 70 aa6.28□□□□□ -1.4
SYNE2-213ENST00000554805 OXTP01178 125 aa6.28□□□□□ -1.4
SYNE2-213ENST00000554805 LINC00528Q8N1L1 170 aa6.28□□□□□ -1.4
SYNE2-213ENST00000554805 RPL37AP8A6NKH3 93 aa6.27□□□□□ -1.41
SYNE2-213ENST00000554805 TRBV7-6A0A0J9YX20 115 aa6.27□□□□□ -1.41
SYNE2-213ENST00000554805 TM2D3Q9BRN9 247 aa6.27□□□□□ -1.41
SYNE2-213ENST00000554805 F8WEM9 126 aa6.27□□□□□ -1.41
SYNE2-213ENST00000554805 STAB2Q8WWQ8 2551 aa6.27□□□□□ -1.41
SYNE2-213ENST00000554805 BPY2O14599 106 aa6.26□□□□□ -1.41
SYNE2-213ENST00000554805 C4orf26Q17RF5 130 aa6.26□□□□□ -1.41
SYNE2-213ENST00000554805 HRCT1Q6UXD1 115 aa6.26□□□□□ -1.41
SYNE2-213ENST00000554805 C11orf45Q8TAV5 145 aa6.26□□□□□ -1.41
SYNE2-213ENST00000554805 C7orf33Q8WU49 177 aa6.25□□□□□ -1.41
SYNE2-213ENST00000554805 KRTAP26-1Q6PEX3 210 aa6.25□□□□□ -1.41
SYNE2-213ENST00000554805 ETDCA0A1B0GVM5 59 aa6.24□□□□□ -1.41
SYNE2-213ENST00000554805 H7BZZ5 65 aa6.24□□□□□ -1.41
SYNE2-213ENST00000554805 SERTAD4-AS1Q5TG53 156 aa6.24□□□□□ -1.41
SYNE2-213ENST00000554805 SEC61GP60059 68 aa6.24□□□□□ -1.41
SYNE2-213ENST00000554805 KRTAP10-11P60412 298 aa6.24□□□□□ -1.41
SYNE2-213ENST00000554805 H3BNG1 76 aa6.24□□□□□ -1.41
SYNE2-213ENST00000554805 LINC01556Q5JQF7 62 aa6.23□□□□□ -1.41
SYNE2-213ENST00000554805 FUSP35637 526 aaKnown RBP eCLIP6.23□□□□□ -1.41
SYNE2-213ENST00000554805 SERP1Q9Y6X1 66 aa6.22□□□□□ -1.41
SYNE2-213ENST00000554805 UBE2BP63146 152 aa6.22□□□□□ -1.41
SYNE2-213ENST00000554805 FAM168BA1KXE4 195 aa6.21□□□□□ -1.42
SYNE2-213ENST00000554805 KLKP1Q107X0 134 aa6.21□□□□□ -1.42
SYNE2-213ENST00000554805 Q8N377 158 aa6.21□□□□□ -1.42
SYNE2-213ENST00000554805 TMEM254Q8TBM7 123 aa6.2□□□□□ -1.42
SYNE2-213ENST00000554805 KCNQ1DNQ9H478 68 aa6.2□□□□□ -1.42
SYNE2-213ENST00000554805 ST20-AS1Q8NBB2 130 aa6.2□□□□□ -1.42
SYNE2-213ENST00000554805 Q5XG85 94 aa6.19□□□□□ -1.42
SYNE2-213ENST00000554805 DHRS4-AS1Q9P1J3 65 aa6.19□□□□□ -1.42
SYNE2-213ENST00000554805 IGKV4-1P06312 121 aa6.19□□□□□ -1.42
SYNE2-213ENST00000554805 C1orf137Q5JT78 98 aa6.19□□□□□ -1.42
SYNE2-213ENST00000554805 CASC10Q5T4H9 136 aa6.19□□□□□ -1.42
SYNE2-213ENST00000554805 PKIGQ9Y2B9 76 aa6.19□□□□□ -1.42
SYNE2-213ENST00000554805 NDUFC1O43677 76 aa6.18□□□□□ -1.42
SYNE2-213ENST00000554805 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
SYNE2-213ENST00000554805 Q6ZRX8 168 aa6.17□□□□□ -1.42
SYNE2-213ENST00000554805 MDFIQ99750 246 aa6.17□□□□□ -1.42
SYNE2-213ENST00000554805 A0A0U1RQV1 116 aa6.15□□□□□ -1.42
SYNE2-213ENST00000554805 PRYO14603 147 aa6.15□□□□□ -1.42
SYNE2-213ENST00000554805 DNAH10OSP0CZ25 163 aa6.15□□□□□ -1.42
SYNE2-213ENST00000554805 LINC00588Q9Y4M8 146 aa6.15□□□□□ -1.42
SYNE2-213ENST00000554805 IGKV2-24A0A0C4DH68 120 aa6.15□□□□□ -1.43
SYNE2-213ENST00000554805 A0A1W2PNM2 257 aa6.15□□□□□ -1.43
SYNE2-213ENST00000554805 Q9BRP9 147 aa6.15□□□□□ -1.43
SYNE2-213ENST00000554805 HIGD2AQ9BW72 106 aa6.15□□□□□ -1.43
SYNE2-213ENST00000554805 ANK2Q01484 3957 aa6.15□□□□□ -1.43
SYNE2-213ENST00000554805 SMIM29Q86T20 159 aa6.15□□□□□ -1.43
SYNE2-213ENST00000554805 IGLV1-50A0A075B6I6 118 aa6.14□□□□□ -1.43
SYNE2-213ENST00000554805 SMIM26A0A096LP01 95 aa6.14□□□□□ -1.43
SYNE2-213ENST00000554805 ERC2-IT1O76042 136 aa6.14□□□□□ -1.43
SYNE2-213ENST00000554805 MRPL55Q7Z7F7 128 aaKnown RBP6.14□□□□□ -1.43
SYNE2-213ENST00000554805 IGLV5-48A0A075B6I7 105 aa6.13□□□□□ -1.43
SYNE2-213ENST00000554805 A0A0G2JQZ4 141 aa6.13□□□□□ -1.43
SYNE2-213ENST00000554805 A0A1W2PNN7 141 aa6.13□□□□□ -1.43
SYNE2-213ENST00000554805 Q8NBF4 154 aa6.12□□□□□ -1.43
SYNE2-213ENST00000554805 LINC00474Q9P2X8 69 aa6.12□□□□□ -1.43
SYNE2-213ENST00000554805 MPLKIPQ8TAP9 179 aa6.12□□□□□ -1.43
SYNE2-213ENST00000554805 OCR1Q9BZK8 76 aa6.12□□□□□ -1.43
SYNE2-213ENST00000554805 TLX1NBP0CAT3 122 aa6.12□□□□□ -1.43
SYNE2-213ENST00000554805 ATP5EP56381 51 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-213ENST00000554805 SRRM2Q9UQ35 2752 aaKnown RBP6.11□□□□□ -1.43
SYNE2-213ENST00000554805 DEFB116Q30KQ4 102 aa6.11□□□□□ -1.43
SYNE2-213ENST00000554805 PSCAO43653 123 aa6.11□□□□□ -1.43
SYNE2-213ENST00000554805 REG3GQ6UW15 175 aa6.11□□□□□ -1.43
SYNE2-213ENST00000554805 PLA2G2DQ9UNK4 145 aa6.1□□□□□ -1.43
SYNE2-213ENST00000554805 COL7A1Q02388 2944 aa6.1□□□□□ -1.43
SYNE2-213ENST00000554805 LCE6AA0A183 80 aa6.1□□□□□ -1.43
SYNE2-213ENST00000554805 PRLHP81277 87 aa6.1□□□□□ -1.43
SYNE2-213ENST00000554805 PRO0628Q9UI54 55 aa6.09□□□□□ -1.43
SYNE2-213ENST00000554805 TGP01266 2768 aa6.08□□□□□ -1.44
SYNE2-213ENST00000554805 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-213ENST00000554805 K7EQZ3 153 aa6.08□□□□□ -1.44
SYNE2-213ENST00000554805 LINC00476Q8WZB0 136 aa6.08□□□□□ -1.44
SYNE2-213ENST00000554805 KRTAP4-16G5E9R7 235 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-213ENST00000554805 SPRR1AP35321 89 aa6.08□□□□□ -1.44
SYNE2-213ENST00000554805 FP248Q71RG6 208 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-213ENST00000554805 WFDC13Q8IUB5 93 aa6.08□□□□□ -1.44
SYNE2-213ENST00000554805 KRTAP7-1Q8IUC3 87 aa6.08□□□□□ -1.44
SYNE2-213ENST00000554805 IGLV5-37A0A075B6J1 123 aa6.07□□□□□ -1.44
SYNE2-213ENST00000554805 PRR4Q16378 134 aa6.07□□□□□ -1.44
SYNE2-213ENST00000554805 UBE2DNLQ8IWF7 75 aa6.07□□□□□ -1.44
SYNE2-213ENST00000554805 V9GYY9 64 aa6.07□□□□□ -1.44
SYNE2-213ENST00000554805 LRCOL1A6NCL2 159 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms