RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 TEX15Q9BXT5 2789 aa2.13□□□□□ -2.07
SEC23A-207ENST00000554615 MAP1BP46821 2468 aaKnown RBP2.13□□□□□ -2.07
SEC23A-207ENST00000554615 C16orf90A8MZG2 172 aa2.13□□□□□ -2.07
SEC23A-207ENST00000554615 XCL1P47992 114 aa2.13□□□□□ -2.07
SEC23A-207ENST00000554615 FP248Q71RG6 208 aaPredicted RBP2.13□□□□□ -2.07
SEC23A-207ENST00000554615 C7orf33Q8WU49 177 aa2.13□□□□□ -2.07
SEC23A-207ENST00000554615 DGAT2L7PQ6IED9 249 aa2.13□□□□□ -2.07
SEC23A-207ENST00000554615 WWC2-AS2Q96NR7 200 aa2.13□□□□□ -2.07
SEC23A-207ENST00000554615 MDFIQ99750 246 aa2.13□□□□□ -2.07
SEC23A-207ENST00000554615 IGKV3-7A0A075B6H7 116 aa2.13□□□□□ -2.07
SEC23A-207ENST00000554615 FLNCQ14315 2725 aa2.13□□□□□ -2.07
SEC23A-207ENST00000554615 CEP295Q9C0D2 2601 aa2.12□□□□□ -2.07
SEC23A-207ENST00000554615 MUC6Q6W4X9 2439 aa2.12□□□□□ -2.07
SEC23A-207ENST00000554615 WFDC10BQ8IUB3 73 aa2.12□□□□□ -2.07
SEC23A-207ENST00000554615 PKIGQ9Y2B9 76 aa2.12□□□□□ -2.07
SEC23A-207ENST00000554615 MAP1AP78559 2803 aaPredicted RBP2.12□□□□□ -2.07
SEC23A-207ENST00000554615 ZFHX2Q9C0A1 2572 aaPredicted RBP2.12□□□□□ -2.07
SEC23A-207ENST00000554615 IGKV3OR2-268A0A0C4DH90 116 aa2.12□□□□□ -2.07
SEC23A-207ENST00000554615 LINC00158P58513 81 aa2.12□□□□□ -2.07
SEC23A-207ENST00000554615 TEP1Q99973 2627 aaKnown RBP2.12□□□□□ -2.07
SEC23A-207ENST00000554615 HIVEP1P15822 2718 aa2.12□□□□□ -2.07
SEC23A-207ENST00000554615 ANKRD17O75179 2603 aaKnown RBP2.12□□□□□ -2.07
SEC23A-207ENST00000554615 FLGP20930 4061 aaPredicted RBP2.12□□□□□ -2.07
SEC23A-207ENST00000554615 DAD1P61803 113 aa2.12□□□□□ -2.07
SEC23A-207ENST00000554615 C6orf226Q5I0X4 101 aa2.12□□□□□ -2.07
SEC23A-207ENST00000554615 Q6ZSA8 131 aa2.12□□□□□ -2.07
SEC23A-207ENST00000554615 SPTBN1Q01082 2364 aaKnown RBP2.11□□□□□ -2.07
SEC23A-207ENST00000554615 TRAV10A0A0B4J240 114 aa2.11□□□□□ -2.07
SEC23A-207ENST00000554615 CD164Q04900 197 aa2.11□□□□□ -2.07
SEC23A-207ENST00000554615 C9orf116Q5BN46 136 aaPredicted RBP2.11□□□□□ -2.07
SEC23A-207ENST00000554615 SPACA4Q8TDM5 124 aa2.11□□□□□ -2.07
SEC23A-207ENST00000554615 SS18L2Q9UHA2 77 aa2.11□□□□□ -2.07
SEC23A-207ENST00000554615 COL7A1Q02388 2944 aa2.11□□□□□ -2.07
SEC23A-207ENST00000554615 TLN1Q9Y490 2541 aaKnown RBP2.11□□□□□ -2.07
SEC23A-207ENST00000554615 hDV103S1A0JD37 113 aa2.11□□□□□ -2.07
SEC23A-207ENST00000554615 Q1RN00 199 aa2.11□□□□□ -2.07
SEC23A-207ENST00000554615 USP9XQ93008 2570 aaPredicted RBP2.11□□□□□ -2.07
SEC23A-207ENST00000554615 RPL35AP18077 110 aaKnown RBP2.11□□□□□ -2.07
SEC23A-207ENST00000554615 CFAP161Q6P656 301 aa2.11□□□□□ -2.07
SEC23A-207ENST00000554615 FAM19A1Q7Z5A9 133 aa2.11□□□□□ -2.07
SEC23A-207ENST00000554615 KRTAP11-1Q8IUC1 163 aa2.11□□□□□ -2.07
SEC23A-207ENST00000554615 PKD1L2Q7Z442 2459 aa2.11□□□□□ -2.07
SEC23A-207ENST00000554615 LRP1Q07954 4544 aaKnown RBP2.1□□□□□ -2.07
SEC23A-207ENST00000554615 DNAL4O96015 105 aa2.1□□□□□ -2.07
SEC23A-207ENST00000554615 KRTAP24-1Q3LI83 254 aa2.1□□□□□ -2.07
SEC23A-207ENST00000554615 KRTAP1-5Q9BYS1 174 aa2.1□□□□□ -2.07
SEC23A-207ENST00000554615 SELENOKQ9Y6D0 94 aa2.1□□□□□ -2.07
SEC23A-207ENST00000554615 C5orf47Q569G3 176 aa2.1□□□□□ -2.07
SEC23A-207ENST00000554615 GAGE2AQ6NT46 116 aa2.1□□□□□ -2.07
SEC23A-207ENST00000554615 CACNA1HO95180 2353 aa2.1□□□□□ -2.07
SEC23A-207ENST00000554615 VWFP04275 2813 aa2.1□□□□□ -2.07
SEC23A-207ENST00000554615 NPC2P61916 151 aa2.1□□□□□ -2.07
SEC23A-207ENST00000554615 RPS29P62273 56 aaKnown RBP2.1□□□□□ -2.07
SEC23A-207ENST00000554615 FAM19A5Q7Z5A7 132 aaPredicted RBP2.1□□□□□ -2.07
SEC23A-207ENST00000554615 SYCNQ0VAF6 134 aa2.09□□□□□ -2.07
SEC23A-207ENST00000554615 Q6ZQY7 126 aa2.09□□□□□ -2.07
SEC23A-207ENST00000554615 UBL5Q9BZL1 73 aa2.09□□□□□ -2.07
SEC23A-207ENST00000554615 ICE1Q9Y2F5 2266 aa2.09□□□□□ -2.07
SEC23A-207ENST00000554615 K7EIL1 84 aa2.09□□□□□ -2.07
SEC23A-207ENST00000554615 DEFB104AQ8WTQ1 72 aa2.09□□□□□ -2.07
SEC23A-207ENST00000554615 LOC101927531A0A1B0GV80 90 aa2.09□□□□□ -2.08
SEC23A-207ENST00000554615 DEFB135Q30KP9 77 aa2.09□□□□□ -2.08
SEC23A-207ENST00000554615 C9orf153Q5TBE3 101 aa2.09□□□□□ -2.08
SEC23A-207ENST00000554615 MYCBP2O75592 4640 aa2.09□□□□□ -2.08
SEC23A-207ENST00000554615 ZNF462Q96JM2 2506 aa2.09□□□□□ -2.08
SEC23A-207ENST00000554615 IGKV2D-24A0A075B6R9 120 aa2.08□□□□□ -2.08
SEC23A-207ENST00000554615 A0A087WVE0 104 aa2.08□□□□□ -2.08
SEC23A-207ENST00000554615 KRTAP16-1A8MUX0 517 aa2.08□□□□□ -2.08
SEC23A-207ENST00000554615 MRPL55Q7Z7F7 128 aaKnown RBP2.08□□□□□ -2.08
SEC23A-207ENST00000554615 NCOR1O75376 2440 aa2.08□□□□□ -2.08
SEC23A-207ENST00000554615 RYR2Q92736 4967 aa2.08□□□□□ -2.08
SEC23A-207ENST00000554615 MMP24-AS1A0A0U1RRL7 71 aa2.08□□□□□ -2.08
SEC23A-207ENST00000554615 ANGP03950 147 aaKnown RBP2.08□□□□□ -2.08
SEC23A-207ENST00000554615 IGFL1Q6UW32 110 aa2.08□□□□□ -2.08
SEC23A-207ENST00000554615 C1orf195Q5TG92 126 aa2.08□□□□□ -2.08
SEC23A-207ENST00000554615 PIEZO1Q92508 2521 aa2.08□□□□□ -2.08
SEC23A-207ENST00000554615 INAFM1C9JVW0 142 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 H7C2G1 150 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 NREPQ16612 68 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 RMI2Q96E14 147 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 DSCR8Q96T75 97 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 SMR3AQ99954 134 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 B9D2Q9BPU9 175 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 CNOT1A5YKK6 2376 aaKnown RBP2.07□□□□□ -2.08
SEC23A-207ENST00000554615 FAM236DA0A1B0GTK5 79 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 FAM236CP0DP71 79 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 KRTAP10-4P60372 401 aaPredicted RBP2.07□□□□□ -2.08
SEC23A-207ENST00000554615 CASC10Q5T4H9 136 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 REG3GQ6UW15 175 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 SMIM26A0A096LP01 95 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 BPY2O14599 106 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 PRR15Q8IV56 129 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 PCNX1Q96RV3 2341 aa2.07□□□□□ -2.08
SEC23A-207ENST00000554615 NSD1Q96L73 2696 aaPredicted RBP2.07□□□□□ -2.08
SEC23A-207ENST00000554615 PKDREJQ9NTG1 2253 aa2.06□□□□□ -2.08
SEC23A-207ENST00000554615 TMEM254Q8TBM7 123 aa2.06□□□□□ -2.08
SEC23A-207ENST00000554615 CHD8Q9HCK8 2581 aa2.06□□□□□ -2.08
SEC23A-207ENST00000554615 IGLV7-46A0A075B6I9 117 aa2.06□□□□□ -2.08
SEC23A-207ENST00000554615 TRAV22A0A0B4J277 110 aa2.06□□□□□ -2.08
SEC23A-207ENST00000554615 FAM168BA1KXE4 195 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms