RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 C6orf99Q4VX62 202 aa7.75□□□□□ -1.17
SHMT2-212ENST00000554467 CASC10Q5T4H9 136 aa7.75□□□□□ -1.17
SHMT2-212ENST00000554467 C15orf56Q8N910 161 aa7.75□□□□□ -1.17
SHMT2-212ENST00000554467 CAMK2N2Q96S95 79 aa7.75□□□□□ -1.17
SHMT2-212ENST00000554467 SNURFQ9Y675 71 aa7.75□□□□□ -1.17
SHMT2-212ENST00000554467 DNAH1Q9P2D7 4330 aa7.74□□□□□ -1.17
SHMT2-212ENST00000554467 RMI2Q96E14 147 aa7.74□□□□□ -1.17
SHMT2-212ENST00000554467 TGP01266 2768 aa7.74□□□□□ -1.17
SHMT2-212ENST00000554467 PLECQ15149 4684 aaKnown RBP7.73□□□□□ -1.17
SHMT2-212ENST00000554467 Q6ZRU5 148 aa7.73□□□□□ -1.17
SHMT2-212ENST00000554467 COX17Q14061 63 aa7.72□□□□□ -1.17
SHMT2-212ENST00000554467 DNAH10OSP0CZ25 163 aa7.72□□□□□ -1.17
SHMT2-212ENST00000554467 M0R2N4 97 aa7.72□□□□□ -1.17
SHMT2-212ENST00000554467 KLKP1Q107X0 134 aa7.71□□□□□ -1.17
SHMT2-212ENST00000554467 LINC00167Q96N53 147 aa7.71□□□□□ -1.18
SHMT2-212ENST00000554467 LAMTOR3Q9UHA4 124 aa7.71□□□□□ -1.18
SHMT2-212ENST00000554467 ATP5EP2Q5VTU8 51 aa7.7□□□□□ -1.18
SHMT2-212ENST00000554467 F8WEM9 126 aa7.7□□□□□ -1.18
SHMT2-212ENST00000554467 Q8N814 137 aa7.7□□□□□ -1.18
SHMT2-212ENST00000554467 TRAV7A0A075B6U4 112 aa7.69□□□□□ -1.18
SHMT2-212ENST00000554467 SMIM26A0A096LP01 95 aa7.69□□□□□ -1.18
SHMT2-212ENST00000554467 A0A0U1RQV1 116 aa7.69□□□□□ -1.18
SHMT2-212ENST00000554467 TRBV10-3A0A0K0K1G6 114 aa7.69□□□□□ -1.18
SHMT2-212ENST00000554467 FAM229BQ4G0N7 80 aa7.69□□□□□ -1.18
SHMT2-212ENST00000554467 TRBV7-6A0A0J9YX20 115 aa7.68□□□□□ -1.18
SHMT2-212ENST00000554467 B9D2Q9BPU9 175 aa7.67□□□□□ -1.18
SHMT2-212ENST00000554467 KRTAP1-5Q9BYS1 174 aa7.67□□□□□ -1.18
SHMT2-212ENST00000554467 STARD9Q9P2P6 4700 aa7.67□□□□□ -1.18
SHMT2-212ENST00000554467 JMJD7-PLA2G4BH0Y9G9 81 aa7.66□□□□□ -1.18
SHMT2-212ENST00000554467 BRK1Q8WUW1 75 aa7.66□□□□□ -1.18
SHMT2-212ENST00000554467 LINC01547P58512 204 aaPredicted RBP7.66□□□□□ -1.18
SHMT2-212ENST00000554467 Q6ZRP5 223 aa7.66□□□□□ -1.18
SHMT2-212ENST00000554467 GVQW2A0A096LPI5 108 aaPredicted RBP7.65□□□□□ -1.18
SHMT2-212ENST00000554467 UBL5Q9BZL1 73 aa7.65□□□□□ -1.18
SHMT2-212ENST00000554467 TMEM256-PLSCR3K7ERE1 68 aa7.65□□□□□ -1.18
SHMT2-212ENST00000554467 SYCNQ0VAF6 134 aa7.65□□□□□ -1.18
SHMT2-212ENST00000554467 DYNC2H1Q8NCM8 4307 aaKnown RBP7.65□□□□□ -1.19
SHMT2-212ENST00000554467 Q6ZQY7 126 aa7.65□□□□□ -1.19
SHMT2-212ENST00000554467 UBE2DNLQ8IWF7 75 aa7.65□□□□□ -1.19
SHMT2-212ENST00000554467 SEC61GP60059 68 aa7.64□□□□□ -1.19
SHMT2-212ENST00000554467 Q6ZQT0 140 aa7.64□□□□□ -1.19
SHMT2-212ENST00000554467 FBN3Q75N90 2809 aa7.64□□□□□ -1.19
SHMT2-212ENST00000554467 HAMPP81172 84 aa7.63□□□□□ -1.19
SHMT2-212ENST00000554467 RBM3P98179 157 aaKnown RBP7.63□□□□□ -1.19
SHMT2-212ENST00000554467 TRBV7-4A0A0J9YYF1 115 aa7.62□□□□□ -1.19
SHMT2-212ENST00000554467 BCE1O60756 84 aa7.62□□□□□ -1.19
SHMT2-212ENST00000554467 C1orf195Q5TG92 126 aa7.62□□□□□ -1.19
SHMT2-212ENST00000554467 APLNQ9ULZ1 77 aa7.62□□□□□ -1.19
SHMT2-212ENST00000554467 Q6ZVQ6 151 aa7.61□□□□□ -1.19
SHMT2-212ENST00000554467 LINC00575Q6W349 94 aa7.61□□□□□ -1.19
SHMT2-212ENST00000554467 VPREB1P12018 145 aa7.6□□□□□ -1.19
SHMT2-212ENST00000554467 MPLKIPQ8TAP9 179 aa7.6□□□□□ -1.19
SHMT2-212ENST00000554467 FAM168BA1KXE4 195 aa7.6□□□□□ -1.19
SHMT2-212ENST00000554467 IGLV6-57P01721 117 aa7.6□□□□□ -1.19
SHMT2-212ENST00000554467 SCXQ7RTU7 201 aa7.6□□□□□ -1.19
SHMT2-212ENST00000554467 V9GYY9 64 aa7.59□□□□□ -1.19
SHMT2-212ENST00000554467 SERTAD4-AS1Q5TG53 156 aa7.59□□□□□ -1.19
SHMT2-212ENST00000554467 DIRC1Q969H9 104 aa7.58□□□□□ -1.2
SHMT2-212ENST00000554467 PSCAO43653 123 aa7.57□□□□□ -1.2
SHMT2-212ENST00000554467 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.57□□□□□ -1.2
SHMT2-212ENST00000554467 LOC110117498A0A087WWA1 95 aa7.57□□□□□ -1.2
SHMT2-212ENST00000554467 DEFB105AQ8NG35 78 aa7.56□□□□□ -1.2
SHMT2-212ENST00000554467 MUC7Q8TAX7 377 aa7.56□□□□□ -1.2
SHMT2-212ENST00000554467 KMT2AQ03164 3969 aa7.56□□□□□ -1.2
SHMT2-212ENST00000554467 ZNF73O43830 326 aaPredicted RBP7.56□□□□□ -1.2
SHMT2-212ENST00000554467 RPL37AP8A6NKH3 93 aa7.55□□□□□ -1.2
SHMT2-212ENST00000554467 SRRM2Q9UQ35 2752 aaKnown RBP7.55□□□□□ -1.2
SHMT2-212ENST00000554467 CXCL6P80162 114 aa7.54□□□□□ -1.2
SHMT2-212ENST00000554467 VPS13DQ5THJ4 4388 aa7.54□□□□□ -1.2
SHMT2-212ENST00000554467 M0R378 163 aa7.54□□□□□ -1.2
SHMT2-212ENST00000554467 COX7BP24311 80 aa7.54□□□□□ -1.2
SHMT2-212ENST00000554467 NKAPP1Q8N9T2 125 aa7.54□□□□□ -1.2
SHMT2-212ENST00000554467 TMEM254Q8TBM7 123 aa7.53□□□□□ -1.2
SHMT2-212ENST00000554467 NDUFC1O43677 76 aa7.53□□□□□ -1.2
SHMT2-212ENST00000554467 IGKV2-24A0A0C4DH68 120 aa7.53□□□□□ -1.2
SHMT2-212ENST00000554467 NREPQ16612 68 aa7.52□□□□□ -1.21
SHMT2-212ENST00000554467 C7orf33Q8WU49 177 aa7.52□□□□□ -1.21
SHMT2-212ENST00000554467 KRTAP7-1Q8IUC3 87 aa7.52□□□□□ -1.21
SHMT2-212ENST00000554467 NUPR2A6NF83 97 aa7.51□□□□□ -1.21
SHMT2-212ENST00000554467 FUSP35637 526 aaKnown RBP eCLIP7.5□□□□□ -1.21
SHMT2-212ENST00000554467 Q8N9L7 120 aa7.5□□□□□ -1.21
SHMT2-212ENST00000554467 BPY2O14599 106 aa7.5□□□□□ -1.21
SHMT2-212ENST00000554467 ATP5EP56381 51 aaPredicted RBP7.5□□□□□ -1.21
SHMT2-212ENST00000554467 DNAH2Q9P225 4427 aa7.49□□□□□ -1.21
SHMT2-212ENST00000554467 NBDYA0A0U1RRE5 68 aa7.49□□□□□ -1.21
SHMT2-212ENST00000554467 A0A096LNI7 61 aa7.48□□□□□ -1.21
SHMT2-212ENST00000554467 TLX1NBP0CAT3 122 aa7.48□□□□□ -1.21
SHMT2-212ENST00000554467 CHTF8P0CG12 524 aa7.48□□□□□ -1.21
SHMT2-212ENST00000554467 ELOF1P60002 83 aaKnown RBP7.48□□□□□ -1.21
SHMT2-212ENST00000554467 C3orf84H3BNL1 204 aa7.48□□□□□ -1.21
SHMT2-212ENST00000554467 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.47□□□□□ -1.21
SHMT2-212ENST00000554467 OCR1Q9BZK8 76 aa7.47□□□□□ -1.21
SHMT2-212ENST00000554467 LRCOL1A6NCL2 159 aa7.46□□□□□ -1.22
SHMT2-212ENST00000554467 HIGD2AQ9BW72 106 aa7.46□□□□□ -1.22
SHMT2-212ENST00000554467 PRYO14603 147 aa7.45□□□□□ -1.22
SHMT2-212ENST00000554467 ERC2-IT1O76042 136 aa7.45□□□□□ -1.22
SHMT2-212ENST00000554467 LINC00528Q8N1L1 170 aa7.45□□□□□ -1.22
SHMT2-212ENST00000554467 IGKV4-1P06312 121 aa7.44□□□□□ -1.22
SHMT2-212ENST00000554467 A0A1W2PNN7 141 aa7.44□□□□□ -1.22
SHMT2-212ENST00000554467 PRR15Q8IV56 129 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms