RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 HIST1H2BOP23527 126 aa6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 HIST1H2BBP33778 126 aa6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 HIST1H2BDP58876 126 aa6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 HIST1H2BCP62807 126 aa6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 S100A12P80511 92 aa6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 PRR4Q16378 134 aa6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 HIST2H2BEQ16778 126 aa6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 HIST1H2BHQ93079 126 aa6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 HIST1H2BNQ99877 126 aa6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 HIST1H2BMQ99879 126 aa6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 HIGD2AQ9BW72 106 aa6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 ZNF706Q9Y5V0 76 aaPredicted RBP6.08□□□□□ -1.44
PTCD2P1-201ENST00000554393 TRBV10-3A0A0K0K1G6 114 aa6.07□□□□□ -1.44
PTCD2P1-201ENST00000554393 E9PLD3 99 aa6.07□□□□□ -1.44
PTCD2P1-201ENST00000554393 SYS1-DBNDD2H3BUS1 97 aa6.07□□□□□ -1.44
PTCD2P1-201ENST00000554393 TSPAN13O95857 204 aa6.07□□□□□ -1.44
PTCD2P1-201ENST00000554393 LINC00304Q8N9R0 145 aa6.07□□□□□ -1.44
PTCD2P1-201ENST00000554393 SPRR4Q96PI1 79 aa6.07□□□□□ -1.44
PTCD2P1-201ENST00000554393 MIEN1Q9BRT3 115 aa6.07□□□□□ -1.44
PTCD2P1-201ENST00000554393 B5MCH6 92 aa6.06□□□□□ -1.44
PTCD2P1-201ENST00000554393 NDUFC2O95298 119 aa6.06□□□□□ -1.44
PTCD2P1-201ENST00000554393 DAND5Q8N907 189 aa6.06□□□□□ -1.44
PTCD2P1-201ENST00000554393 SPANXB1Q9NS25 103 aaPredicted RBP6.06□□□□□ -1.44
PTCD2P1-201ENST00000554393 ETDCA0A1B0GVM5 59 aa6.05□□□□□ -1.44
PTCD2P1-201ENST00000554393 A0A0J9YXY3 114 aa6.04□□□□□ -1.44
PTCD2P1-201ENST00000554393 DDTP30046 118 aa6.04□□□□□ -1.44
PTCD2P1-201ENST00000554393 COA6Q5JTJ3 125 aaKnown RBP6.04□□□□□ -1.44
PTCD2P1-201ENST00000554393 LCE5AQ5TCM9 118 aa6.04□□□□□ -1.44
PTCD2P1-201ENST00000554393 LINC01545Q5VT33 79 aa6.04□□□□□ -1.44
PTCD2P1-201ENST00000554393 PET117Q6UWS5 81 aa6.04□□□□□ -1.44
PTCD2P1-201ENST00000554393 IGLV6-57P01721 117 aa6.03□□□□□ -1.44
PTCD2P1-201ENST00000554393 SPAG11AQ6PDA7 123 aa6.03□□□□□ -1.44
PTCD2P1-201ENST00000554393 C3orf22Q8N5N4 141 aa6.03□□□□□ -1.44
PTCD2P1-201ENST00000554393 SMCR5Q8TEV8 140 aa6.03□□□□□ -1.44
PTCD2P1-201ENST00000554393 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
PTCD2P1-201ENST00000554393 TIMM17BO60830 172 aa6.02□□□□□ -1.45
PTCD2P1-201ENST00000554393 LINC00483Q53H64 154 aa6.02□□□□□ -1.45
PTCD2P1-201ENST00000554393 A0A0U1RQV1 116 aa6.01□□□□□ -1.45
PTCD2P1-201ENST00000554393 S100A7L2Q5SY68 101 aa6.01□□□□□ -1.45
PTCD2P1-201ENST00000554393 ADAMTSL4-AS1Q5T5F5 129 aa6.01□□□□□ -1.45
PTCD2P1-201ENST00000554393 SOSTDC1Q6X4U4 206 aa6.01□□□□□ -1.45
PTCD2P1-201ENST00000554393 Q6ZRX8 168 aa6.01□□□□□ -1.45
PTCD2P1-201ENST00000554393 CBY1Q9Y3M2 126 aa6.01□□□□□ -1.45
PTCD2P1-201ENST00000554393 LITAFQ99732 161 aa6□□□□□ -1.45
PTCD2P1-201ENST00000554393 TRAV23DV6A0A075B6W5 121 aa5.99□□□□□ -1.45
PTCD2P1-201ENST00000554393 C3orf79P0CE67 100 aa5.99□□□□□ -1.45
PTCD2P1-201ENST00000554393 JOSD1Q15040 202 aaPredicted RBP5.99□□□□□ -1.45
PTCD2P1-201ENST00000554393 SPANXCQ9NY87 97 aa5.99□□□□□ -1.45
PTCD2P1-201ENST00000554393 ZNF815PA8K554 130 aa5.98□□□□□ -1.45
PTCD2P1-201ENST00000554393 NPC2P61916 151 aa5.98□□□□□ -1.45
PTCD2P1-201ENST00000554393 LINC00308Q8TCZ7 52 aa5.98□□□□□ -1.45
PTCD2P1-201ENST00000554393 Q9BRP9 147 aa5.98□□□□□ -1.45
PTCD2P1-201ENST00000554393 C20orf202A1L168 122 aa5.97□□□□□ -1.45
PTCD2P1-201ENST00000554393 ZNF73O43830 326 aaPredicted RBP5.97□□□□□ -1.45
PTCD2P1-201ENST00000554393 AKR1D1P51857 326 aa5.97□□□□□ -1.45
PTCD2P1-201ENST00000554393 KRTDAPP60985 99 aa5.97□□□□□ -1.45
PTCD2P1-201ENST00000554393 TPRXLQ17RH7 258 aa5.97□□□□□ -1.45
PTCD2P1-201ENST00000554393 RETNLBQ9BQ08 111 aa5.97□□□□□ -1.45
PTCD2P1-201ENST00000554393 PPDPFQ9H3Y8 114 aa5.97□□□□□ -1.45
PTCD2P1-201ENST00000554393 C5orf52A6NGY3 159 aa5.96□□□□□ -1.46
PTCD2P1-201ENST00000554393 ERC2-IT1O76042 136 aa5.96□□□□□ -1.46
PTCD2P1-201ENST00000554393 SPINK1P00995 79 aa5.96□□□□□ -1.46
PTCD2P1-201ENST00000554393 HINT1P49773 126 aaPredicted RBP5.96□□□□□ -1.46
PTCD2P1-201ENST00000554393 GAGE2AQ6NT46 116 aa5.96□□□□□ -1.46
PTCD2P1-201ENST00000554393 Q8NBF4 154 aa5.96□□□□□ -1.46
PTCD2P1-201ENST00000554393 IGLV7-46A0A075B6I9 117 aa5.95□□□□□ -1.46
PTCD2P1-201ENST00000554393 FP248Q71RG6 208 aaPredicted RBP5.95□□□□□ -1.46
PTCD2P1-201ENST00000554393 SSBP3-AS1Q7Z2R9 100 aa5.95□□□□□ -1.46
PTCD2P1-201ENST00000554393 SPANXDQ9BXN6 97 aa5.95□□□□□ -1.46
PTCD2P1-201ENST00000554393 RPS29P62273 56 aaKnown RBP5.94□□□□□ -1.46
PTCD2P1-201ENST00000554393 LINC00518Q8N0U6 118 aa5.94□□□□□ -1.46
PTCD2P1-201ENST00000554393 COPS9Q8WXC6 57 aa5.94□□□□□ -1.46
PTCD2P1-201ENST00000554393 TTTY13Q9BZ97 58 aa5.94□□□□□ -1.46
PTCD2P1-201ENST00000554393 MOBPQ13875 183 aa5.93□□□□□ -1.46
PTCD2P1-201ENST00000554393 OR13C6PQ8NH95 151 aa5.93□□□□□ -1.46
PTCD2P1-201ENST00000554393 IGLV9-49A0A0B4J1Y8 123 aa5.92□□□□□ -1.46
PTCD2P1-201ENST00000554393 SCGB1D4Q6XE38 83 aa5.92□□□□□ -1.46
PTCD2P1-201ENST00000554393 Q6ZVH6 145 aa5.92□□□□□ -1.46
PTCD2P1-201ENST00000554393 DHRS4-AS1Q9P1J3 65 aa5.92□□□□□ -1.46
PTCD2P1-201ENST00000554393 IFITM1P13164 125 aa5.91□□□□□ -1.46
PTCD2P1-201ENST00000554393 SNRPEP62304 92 aaKnown RBP5.91□□□□□ -1.46
PTCD2P1-201ENST00000554393 SPRR1BP22528 89 aa5.9□□□□□ -1.46
PTCD2P1-201ENST00000554393 ELOF1P60002 83 aaKnown RBP5.9□□□□□ -1.46
PTCD2P1-201ENST00000554393 TRBV7-6A0A0J9YX20 115 aa5.89□□□□□ -1.47
PTCD2P1-201ENST00000554393 SLC25A34Q6PIV7 304 aa5.89□□□□□ -1.47
PTCD2P1-201ENST00000554393 ATOH7Q8N100 152 aa5.89□□□□□ -1.47
PTCD2P1-201ENST00000554393 ST20-AS1Q8NBB2 130 aa5.89□□□□□ -1.47
PTCD2P1-201ENST00000554393 COX7BP24311 80 aa5.88□□□□□ -1.47
PTCD2P1-201ENST00000554393 C6orf99Q4VX62 202 aa5.88□□□□□ -1.47
PTCD2P1-201ENST00000554393 C9orf153Q5TBE3 101 aa5.88□□□□□ -1.47
PTCD2P1-201ENST00000554393 Q8N377 158 aa5.88□□□□□ -1.47
PTCD2P1-201ENST00000554393 SLC25A20O43772 301 aa5.87□□□□□ -1.47
PTCD2P1-201ENST00000554393 KRTAP13-3Q3SY46 172 aa5.87□□□□□ -1.47
PTCD2P1-201ENST00000554393 PCP2Q8IVA1 136 aa5.87□□□□□ -1.47
PTCD2P1-201ENST00000554393 HIST3H2BBQ8N257 126 aa5.87□□□□□ -1.47
PTCD2P1-201ENST00000554393 HIST1H2BLQ99880 126 aa5.87□□□□□ -1.47
PTCD2P1-201ENST00000554393 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
PTCD2P1-201ENST00000554393 A0A1B0GWB2 263 aa5.86□□□□□ -1.47
PTCD2P1-201ENST00000554393 S100A2P29034 98 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms