RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 HYDINQ4G0P3 5121 aa4.03□□□□□ -1.76
VPS33B-203ENST00000554264 LOC110117498A0A087WWA1 95 aa4.03□□□□□ -1.76
VPS33B-203ENST00000554264 PLAC8L1A1L4L8 177 aa4.03□□□□□ -1.76
VPS33B-203ENST00000554264 LY6G6CO95867 125 aa4.03□□□□□ -1.76
VPS33B-203ENST00000554264 IGLV1-51P01701 117 aa4.03□□□□□ -1.76
VPS33B-203ENST00000554264 ATP5EP56381 51 aaPredicted RBP4.03□□□□□ -1.76
VPS33B-203ENST00000554264 CD164L2Q6UWJ8 174 aa4.03□□□□□ -1.76
VPS33B-203ENST00000554264 LYSTQ99698 3801 aa4.03□□□□□ -1.76
VPS33B-203ENST00000554264 LINC00846Q9NV44 126 aa4.03□□□□□ -1.76
VPS33B-203ENST00000554264 HERC2O95714 4834 aa4.02□□□□□ -1.77
VPS33B-203ENST00000554264 TRBV7-6A0A0J9YX20 115 aa4.02□□□□□ -1.77
VPS33B-203ENST00000554264 LOC107984640A0A0U1RRK4 108 aa4.02□□□□□ -1.77
VPS33B-203ENST00000554264 LYRM9A8MSI8 78 aa4.02□□□□□ -1.77
VPS33B-203ENST00000554264 NDUFC1O43677 76 aa4.02□□□□□ -1.77
VPS33B-203ENST00000554264 CXCL6P80162 114 aa4.02□□□□□ -1.77
VPS33B-203ENST00000554264 CSNK1G2-AS1Q8NCQ2 148 aa4.02□□□□□ -1.77
VPS33B-203ENST00000554264 PRO0255Q9UI72 69 aa4.02□□□□□ -1.77
VPS33B-203ENST00000554264 LOC100131303A0A0U1RQF7 123 aa4.01□□□□□ -1.77
VPS33B-203ENST00000554264 PFN2P35080 140 aa4.01□□□□□ -1.77
VPS33B-203ENST00000554264 RBM3P98179 157 aaKnown RBP4.01□□□□□ -1.77
VPS33B-203ENST00000554264 UPK3BQ9BT76 320 aa4.01□□□□□ -1.77
VPS33B-203ENST00000554264 CSMD3Q7Z407 3707 aa4.01□□□□□ -1.77
VPS33B-203ENST00000554264 PCLOQ9Y6V0 5065 aa4□□□□□ -1.77
VPS33B-203ENST00000554264 IGLV4-60A0A075B6I1 120 aa4□□□□□ -1.77
VPS33B-203ENST00000554264 TRAV7A0A075B6U4 112 aa4□□□□□ -1.77
VPS33B-203ENST00000554264 GVQW2A0A096LPI5 108 aaPredicted RBP4□□□□□ -1.77
VPS33B-203ENST00000554264 NUPR2A6NF83 97 aa4□□□□□ -1.77
VPS33B-203ENST00000554264 PRM2P04554 102 aa4□□□□□ -1.77
VPS33B-203ENST00000554264 C6orf223Q8N319 242 aa4□□□□□ -1.77
VPS33B-203ENST00000554264 DPH3Q96FX2 82 aa4□□□□□ -1.77
VPS33B-203ENST00000554264 RETNQ9HD89 108 aa4□□□□□ -1.77
VPS33B-203ENST00000554264 IGKV3D-7A0A0C4DH55 119 aa3.99□□□□□ -1.77
VPS33B-203ENST00000554264 A0A0J9YWU9 116 aa3.99□□□□□ -1.77
VPS33B-203ENST00000554264 A0A1B0GW54 56 aa3.99□□□□□ -1.77
VPS33B-203ENST00000554264 F8WDY8 70 aa3.99□□□□□ -1.77
VPS33B-203ENST00000554264 NCR3O14931 201 aa3.99□□□□□ -1.77
VPS33B-203ENST00000554264 GIG44P09565 113 aaPredicted RBP3.99□□□□□ -1.77
VPS33B-203ENST00000554264 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.99□□□□□ -1.77
VPS33B-203ENST00000554264 LINC00575Q6W349 94 aa3.99□□□□□ -1.77
VPS33B-203ENST00000554264 DSCR8Q96T75 97 aa3.99□□□□□ -1.77
VPS33B-203ENST00000554264 IGKV3OR2-268A0A0C4DH90 116 aa3.98□□□□□ -1.77
VPS33B-203ENST00000554264 ERC2-IT1O76042 136 aa3.98□□□□□ -1.77
VPS33B-203ENST00000554264 XCL1P47992 114 aa3.98□□□□□ -1.77
VPS33B-203ENST00000554264 SEC61BP60468 96 aaKnown RBP3.98□□□□□ -1.77
VPS33B-203ENST00000554264 Q6ZQT0 140 aa3.98□□□□□ -1.77
VPS33B-203ENST00000554264 FAM19A5Q7Z5A7 132 aaPredicted RBP3.98□□□□□ -1.77
VPS33B-203ENST00000554264 ALMS1Q8TCU4 4167 aa3.97□□□□□ -1.77
VPS33B-203ENST00000554264 PLECQ15149 4684 aaKnown RBP3.97□□□□□ -1.77
VPS33B-203ENST00000554264 FAM236DA0A1B0GTK5 79 aa3.97□□□□□ -1.77
VPS33B-203ENST00000554264 IGLV6-57P01721 117 aa3.97□□□□□ -1.77
VPS33B-203ENST00000554264 FAM236CP0DP71 79 aa3.97□□□□□ -1.77
VPS33B-203ENST00000554264 APOC4P55056 127 aa3.97□□□□□ -1.77
VPS33B-203ENST00000554264 REG3AQ06141 175 aa3.97□□□□□ -1.77
VPS33B-203ENST00000554264 KLKP1Q107X0 134 aa3.97□□□□□ -1.77
VPS33B-203ENST00000554264 KIAA0087Q14695 138 aa3.97□□□□□ -1.77
VPS33B-203ENST00000554264 CHCHD10Q8WYQ3 142 aaPredicted RBP3.97□□□□□ -1.77
VPS33B-203ENST00000554264 SERP1Q9Y6X1 66 aa3.97□□□□□ -1.77
VPS33B-203ENST00000554264 RPL35AP18077 110 aaKnown RBP3.96□□□□□ -1.78
VPS33B-203ENST00000554264 C6orf99Q4VX62 202 aa3.96□□□□□ -1.78
VPS33B-203ENST00000554264 SMIM29Q86T20 159 aa3.96□□□□□ -1.78
VPS33B-203ENST00000554264 DIRC1Q969H9 104 aa3.96□□□□□ -1.78
VPS33B-203ENST00000554264 LAMTOR3Q9UHA4 124 aa3.96□□□□□ -1.78
VPS33B-203ENST00000554264 MIFP14174 115 aa3.95□□□□□ -1.78
VPS33B-203ENST00000554264 SPAG11BQ08648 103 aa3.95□□□□□ -1.78
VPS33B-203ENST00000554264 C9orf129Q5T035 196 aaKnown RBP3.95□□□□□ -1.78
VPS33B-203ENST00000554264 LELP1Q5T871 98 aa3.95□□□□□ -1.78
VPS33B-203ENST00000554264 ENHOQ6UWT2 76 aa3.95□□□□□ -1.78
VPS33B-203ENST00000554264 KIAA1109Q2LD37 5005 aa3.94□□□□□ -1.78
VPS33B-203ENST00000554264 TRAV23DV6A0A075B6W5 121 aa3.94□□□□□ -1.78
VPS33B-203ENST00000554264 A0A087WVE0 104 aa3.94□□□□□ -1.78
VPS33B-203ENST00000554264 EPM2AB3EWF7 344 aa3.94□□□□□ -1.78
VPS33B-203ENST00000554264 H3BNG1 76 aa3.94□□□□□ -1.78
VPS33B-203ENST00000554264 ANGP03950 147 aaKnown RBP3.94□□□□□ -1.78
VPS33B-203ENST00000554264 DEFB130BP0DP73 79 aa3.94□□□□□ -1.78
VPS33B-203ENST00000554264 DEFB130AP0DP74 79 aa3.94□□□□□ -1.78
VPS33B-203ENST00000554264 LINC01547P58512 204 aaPredicted RBP3.94□□□□□ -1.78
VPS33B-203ENST00000554264 Q6ZTC4 211 aa3.94□□□□□ -1.78
VPS33B-203ENST00000554264 LINC00269Q8N2A0 174 aa3.94□□□□□ -1.78
VPS33B-203ENST00000554264 PRR34Q9NV39 138 aa3.94□□□□□ -1.78
VPS33B-203ENST00000554264 TRBV7-4A0A0J9YYF1 115 aa3.93□□□□□ -1.78
VPS33B-203ENST00000554264 COX7BP24311 80 aa3.93□□□□□ -1.78
VPS33B-203ENST00000554264 LINC00336Q6ZUF6 198 aa3.93□□□□□ -1.78
VPS33B-203ENST00000554264 Q6ZVQ6 151 aa3.93□□□□□ -1.78
VPS33B-203ENST00000554264 WFDC10AQ9H1F0 79 aa3.93□□□□□ -1.78
VPS33B-203ENST00000554264 FRAS1Q86XX4 4008 aa3.93□□□□□ -1.78
VPS33B-203ENST00000554264 SMIM26A0A096LP01 95 aa3.92□□□□□ -1.78
VPS33B-203ENST00000554264 ZNF73O43830 326 aaPredicted RBP3.92□□□□□ -1.78
VPS33B-203ENST00000554264 SPART-AS1P0CW21 52 aa3.92□□□□□ -1.78
VPS33B-203ENST00000554264 ELOF1P60002 83 aaKnown RBP3.92□□□□□ -1.78
VPS33B-203ENST00000554264 DAD1P61803 113 aa3.92□□□□□ -1.78
VPS33B-203ENST00000554264 C20orf197Q8N268 126 aa3.92□□□□□ -1.78
VPS33B-203ENST00000554264 C11orf68Q9H3H3 251 aaKnown RBP3.92□□□□□ -1.78
VPS33B-203ENST00000554264 H7BZZ5 65 aa3.91□□□□□ -1.78
VPS33B-203ENST00000554264 M0R378 163 aa3.91□□□□□ -1.78
VPS33B-203ENST00000554264 RYR1P21817 5038 aa3.91□□□□□ -1.78
VPS33B-203ENST00000554264 HAMPP81172 84 aa3.91□□□□□ -1.78
VPS33B-203ENST00000554264 Q6ZQY7 126 aa3.91□□□□□ -1.78
VPS33B-203ENST00000554264 DEFB135Q30KP9 77 aa3.9□□□□□ -1.79
VPS33B-203ENST00000554264 FAM19A1Q7Z5A9 133 aa3.9□□□□□ -1.79
VPS33B-203ENST00000554264 A0A1B0GVY2 172 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms