RNA–Protein interactions for RNA: ENST00000554221.5

LINC00520-203, long intergenic non-protein coding RNA 520, humanhuman

TSL 3

Gene LINC00520, Length 348 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-203ENST00000554221 SPRR1AP35321 89 aa3.75□□□□□ -1.81
LINC00520-203ENST00000554221 S100A7L2Q5SY68 101 aa3.75□□□□□ -1.81
LINC00520-203ENST00000554221 PMCHL2Q9BQD1 86 aa3.75□□□□□ -1.81
LINC00520-203ENST00000554221 LEPROTO15243 131 aa3.74□□□□□ -1.81
LINC00520-203ENST00000554221 SPINK1P00995 79 aa3.74□□□□□ -1.81
LINC00520-203ENST00000554221 NPC2P61916 151 aa3.74□□□□□ -1.81
LINC00520-203ENST00000554221 MOBPQ13875 183 aa3.74□□□□□ -1.81
LINC00520-203ENST00000554221 FP248Q71RG6 208 aaPredicted RBP3.74□□□□□ -1.81
LINC00520-203ENST00000554221 YPEL4Q96NS1 127 aa3.74□□□□□ -1.81
LINC00520-203ENST00000554221 MIEN1Q9BRT3 115 aa3.74□□□□□ -1.81
LINC00520-203ENST00000554221 KRTAP4-16G5E9R7 235 aaPredicted RBP3.73□□□□□ -1.81
LINC00520-203ENST00000554221 J3QQQ9 107 aa3.73□□□□□ -1.81
LINC00520-203ENST00000554221 DPM2O94777 84 aa3.73□□□□□ -1.81
LINC00520-203ENST00000554221 LGALS3P17931 250 aaKnown RBP3.73□□□□□ -1.81
LINC00520-203ENST00000554221 TSPEAR-AS2P59090 65 aa3.73□□□□□ -1.81
LINC00520-203ENST00000554221 HERVK_113P61574 105 aa3.73□□□□□ -1.81
LINC00520-203ENST00000554221 SSBP3-AS1Q7Z2R9 100 aa3.73□□□□□ -1.81
LINC00520-203ENST00000554221 HSPB8Q9UJY1 196 aa3.73□□□□□ -1.81
LINC00520-203ENST00000554221 SERF1AO75920 110 aa3.72□□□□□ -1.81
LINC00520-203ENST00000554221 IGKCP01834 107 aa3.72□□□□□ -1.81
LINC00520-203ENST00000554221 PLNP26678 52 aa3.72□□□□□ -1.81
LINC00520-203ENST00000554221 C9orf153Q5TBE3 101 aa3.72□□□□□ -1.81
LINC00520-203ENST00000554221 Q9BRP9 147 aa3.72□□□□□ -1.81
LINC00520-203ENST00000554221 TRAV23DV6A0A075B6W5 121 aa3.71□□□□□ -1.82
LINC00520-203ENST00000554221 LOC107984156A0A0G2JMH3 177 aa3.71□□□□□ -1.82
LINC00520-203ENST00000554221 TRBV10-2A0A0K0K1G8 114 aa3.71□□□□□ -1.82
LINC00520-203ENST00000554221 NMUP48645 174 aa3.71□□□□□ -1.82
LINC00520-203ENST00000554221 HINT1P49773 126 aaPredicted RBP3.71□□□□□ -1.82
LINC00520-203ENST00000554221 JOSD1Q15040 202 aaPredicted RBP3.71□□□□□ -1.82
LINC00520-203ENST00000554221 KRTAP13-3Q3SY46 172 aa3.71□□□□□ -1.82
LINC00520-203ENST00000554221 LINC00483Q53H64 154 aa3.71□□□□□ -1.82
LINC00520-203ENST00000554221 ANKRD39Q53RE8 183 aa3.71□□□□□ -1.82
LINC00520-203ENST00000554221 ARL17AQ8IVW1 177 aa3.71□□□□□ -1.82
LINC00520-203ENST00000554221 ST20-AS1Q8NBB2 130 aa3.71□□□□□ -1.82
LINC00520-203ENST00000554221 OR13C6PQ8NH95 151 aa3.71□□□□□ -1.82
LINC00520-203ENST00000554221 SPANXB1Q9NS25 103 aaPredicted RBP3.71□□□□□ -1.82
LINC00520-203ENST00000554221 SLC25A20O43772 301 aa3.7□□□□□ -1.82
LINC00520-203ENST00000554221 NDUFC2O95298 119 aa3.7□□□□□ -1.82
LINC00520-203ENST00000554221 IGLV6-57P01721 117 aa3.7□□□□□ -1.82
LINC00520-203ENST00000554221 SEC61BP60468 96 aaKnown RBP3.7□□□□□ -1.82
LINC00520-203ENST00000554221 ADAMTSL4-AS1Q5T5F5 129 aa3.7□□□□□ -1.82
LINC00520-203ENST00000554221 HRCT1Q6UXD1 115 aa3.7□□□□□ -1.82
LINC00520-203ENST00000554221 Q6ZRX8 168 aa3.7□□□□□ -1.82
LINC00520-203ENST00000554221 Q8N377 158 aa3.7□□□□□ -1.82
LINC00520-203ENST00000554221 A0A0J9YXY3 114 aa3.69□□□□□ -1.82
LINC00520-203ENST00000554221 C9orf118A6NHY6 69 aa3.69□□□□□ -1.82
LINC00520-203ENST00000554221 ZNF73O43830 326 aaPredicted RBP3.69□□□□□ -1.82
LINC00520-203ENST00000554221 LINC01547P58512 204 aaPredicted RBP3.69□□□□□ -1.82
LINC00520-203ENST00000554221 ASB16-AS1Q495Z4 193 aa3.69□□□□□ -1.82
LINC00520-203ENST00000554221 SLC7A5P1Q8MH63 180 aa3.69□□□□□ -1.82
LINC00520-203ENST00000554221 SOSTDC1Q6X4U4 206 aa3.68□□□□□ -1.82
LINC00520-203ENST00000554221 DEFB105AQ8NG35 78 aa3.68□□□□□ -1.82
LINC00520-203ENST00000554221 COLCA2A8K830 154 aa3.67□□□□□ -1.82
LINC00520-203ENST00000554221 E9PLD3 99 aa3.67□□□□□ -1.82
LINC00520-203ENST00000554221 TAL2Q16559 108 aa3.67□□□□□ -1.82
LINC00520-203ENST00000554221 LINC00308Q8TCZ7 52 aa3.67□□□□□ -1.82
LINC00520-203ENST00000554221 KRTAP4-1Q9BYQ7 146 aa3.67□□□□□ -1.82
LINC00520-203ENST00000554221 CBY1Q9Y3M2 126 aa3.67□□□□□ -1.82
LINC00520-203ENST00000554221 RPS29P62273 56 aaKnown RBP3.66□□□□□ -1.82
LINC00520-203ENST00000554221 LAMTOR3Q9UHA4 124 aa3.66□□□□□ -1.82
LINC00520-203ENST00000554221 C9orf92A6NGG3 77 aa3.65□□□□□ -1.83
LINC00520-203ENST00000554221 SYS1-DBNDD2H3BUS1 97 aa3.65□□□□□ -1.83
LINC00520-203ENST00000554221 COX7BP24311 80 aa3.65□□□□□ -1.83
LINC00520-203ENST00000554221 SLC25A34Q6PIV7 304 aa3.65□□□□□ -1.83
LINC00520-203ENST00000554221 SPANXCQ9NY87 97 aa3.65□□□□□ -1.83
LINC00520-203ENST00000554221 DHRS4-AS1Q9P1J3 65 aa3.65□□□□□ -1.83
LINC00520-203ENST00000554221 ZNF815PA8K554 130 aa3.64□□□□□ -1.83
LINC00520-203ENST00000554221 LINC00518Q8N0U6 118 aa3.64□□□□□ -1.83
LINC00520-203ENST00000554221 TTTY13Q9BZ97 58 aa3.64□□□□□ -1.83
LINC00520-203ENST00000554221 C5orf52A6NGY3 159 aa3.63□□□□□ -1.83
LINC00520-203ENST00000554221 H7C2G1 150 aa3.63□□□□□ -1.83
LINC00520-203ENST00000554221 Q1RN00 199 aa3.63□□□□□ -1.83
LINC00520-203ENST00000554221 C6orf99Q4VX62 202 aa3.63□□□□□ -1.83
LINC00520-203ENST00000554221 PET117Q6UWS5 81 aa3.63□□□□□ -1.83
LINC00520-203ENST00000554221 LITAFQ99732 161 aa3.63□□□□□ -1.83
LINC00520-203ENST00000554221 LIMD2Q9BT23 127 aa3.63□□□□□ -1.83
LINC00520-203ENST00000554221 IGLV8-61A0A075B6I0 122 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 A6NDN8 102 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 HIST1H2BKO60814 126 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 TIMM17BO60830 172 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 HIST1H2BJP06899 126 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 SPRR1BP22528 89 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 HIST1H2BOP23527 126 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 HIST1H2BBP33778 126 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 HIST1H2BDP58876 126 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 KRTDAPP60985 99 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 HIST1H2BCP62807 126 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 HIST2H2BEQ16778 126 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 PCOTHQ58A44 107 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.62□□□□□ -1.83
LINC00520-203ENST00000554221 LINC01545Q5VT33 79 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 SCGB1D4Q6XE38 83 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 HIST1H2BHQ93079 126 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 HIST1H2BNQ99877 126 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 HIST1H2BMQ99879 126 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 SPANXDQ9BXN6 97 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 PRO1933Q9H354 126 aa3.62□□□□□ -1.83
LINC00520-203ENST00000554221 TEX49A0A1B0GTD5 131 aa3.61□□□□□ -1.83
LINC00520-203ENST00000554221 C3orf79P0CE67 100 aa3.61□□□□□ -1.83
LINC00520-203ENST00000554221 AKR1D1P51857 326 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms