RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
PABPN1-203ENST00000553960 C6orf99Q4VX62 202 aa6.85□□□□□ -1.31
PABPN1-203ENST00000553960 LINC00575Q6W349 94 aa6.85□□□□□ -1.31
PABPN1-203ENST00000553960 LINC00528Q8N1L1 170 aa6.85□□□□□ -1.31
PABPN1-203ENST00000553960 A0A1B0GVY2 172 aa6.84□□□□□ -1.31
PABPN1-203ENST00000553960 FAM168BA1KXE4 195 aa6.84□□□□□ -1.31
PABPN1-203ENST00000553960 H3BMG7 143 aa6.84□□□□□ -1.31
PABPN1-203ENST00000553960 GHRHP01286 108 aa6.84□□□□□ -1.31
PABPN1-203ENST00000553960 OCIAD2Q56VL3 154 aa6.84□□□□□ -1.31
PABPN1-203ENST00000553960 FAT2Q9NYQ8 4349 aa6.83□□□□□ -1.32
PABPN1-203ENST00000553960 KRTAP10-2P60368 255 aa6.83□□□□□ -1.32
PABPN1-203ENST00000553960 LCE2DQ5TA82 110 aaPredicted RBP6.83□□□□□ -1.32
PABPN1-203ENST00000553960 PPDPFLQ8WWR9 84 aa6.83□□□□□ -1.32
PABPN1-203ENST00000553960 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.83□□□□□ -1.32
PABPN1-203ENST00000553960 A0A087WYN8 130 aa6.82□□□□□ -1.32
PABPN1-203ENST00000553960 Q6ZRX8 168 aa6.82□□□□□ -1.32
PABPN1-203ENST00000553960 FAM218AQ96MZ4 157 aa6.82□□□□□ -1.32
PABPN1-203ENST00000553960 DHRS4-AS1Q9P1J3 65 aa6.82□□□□□ -1.32
PABPN1-203ENST00000553960 IGKV2-24A0A0C4DH68 120 aa6.81□□□□□ -1.32
PABPN1-203ENST00000553960 PANO1I0J062 215 aa6.81□□□□□ -1.32
PABPN1-203ENST00000553960 COX7BP24311 80 aa6.81□□□□□ -1.32
PABPN1-203ENST00000553960 REG3GQ6UW15 175 aa6.81□□□□□ -1.32
PABPN1-203ENST00000553960 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.81□□□□□ -1.32
PABPN1-203ENST00000553960 FAM19A5Q7Z5A7 132 aaPredicted RBP6.81□□□□□ -1.32
PABPN1-203ENST00000553960 CLEC2BQ92478 149 aa6.81□□□□□ -1.32
PABPN1-203ENST00000553960 B5MCH6 92 aa6.8□□□□□ -1.32
PABPN1-203ENST00000553960 CHTF8P0CG12 524 aa6.8□□□□□ -1.32
PABPN1-203ENST00000553960 DNAH11Q96DT5 4516 aa6.79□□□□□ -1.32
PABPN1-203ENST00000553960 hADV29S1A0JD25 119 aa6.79□□□□□ -1.32
PABPN1-203ENST00000553960 SLC25A20O43772 301 aa6.79□□□□□ -1.32
PABPN1-203ENST00000553960 SMCPP49901 116 aaPredicted RBP6.79□□□□□ -1.32
PABPN1-203ENST00000553960 ANKRD29Q8N6D5 301 aa6.79□□□□□ -1.32
PABPN1-203ENST00000553960 HYDINQ4G0P3 5121 aa6.78□□□□□ -1.32
PABPN1-203ENST00000553960 KRTAP13-1Q8IUC0 172 aa6.78□□□□□ -1.32
PABPN1-203ENST00000553960 PKD1P98161 4303 aa6.77□□□□□ -1.32
PABPN1-203ENST00000553960 C9JAW5 83 aa6.77□□□□□ -1.33
PABPN1-203ENST00000553960 TMEM256-PLSCR3K7ERE1 68 aa6.77□□□□□ -1.33
PABPN1-203ENST00000553960 DNAL4O96015 105 aa6.77□□□□□ -1.33
PABPN1-203ENST00000553960 TEN1Q86WV5 123 aa6.77□□□□□ -1.33
PABPN1-203ENST00000553960 OBSCN-AS1Q96MR7 158 aa6.77□□□□□ -1.33
PABPN1-203ENST00000553960 IGLV5-48A0A075B6I7 105 aa6.76□□□□□ -1.33
PABPN1-203ENST00000553960 BCE1O60756 84 aa6.76□□□□□ -1.33
PABPN1-203ENST00000553960 C21orf62-AS1Q17RA5 79 aa6.76□□□□□ -1.33
PABPN1-203ENST00000553960 KMT2CQ8NEZ4 4911 aaKnown RBP6.75□□□□□ -1.33
PABPN1-203ENST00000553960 RYR2Q92736 4967 aa6.75□□□□□ -1.33
PABPN1-203ENST00000553960 ETDCA0A1B0GVM5 59 aa6.75□□□□□ -1.33
PABPN1-203ENST00000553960 RPL37AP8A6NKH3 93 aa6.75□□□□□ -1.33
PABPN1-203ENST00000553960 KRTAP10-1P60331 282 aa6.75□□□□□ -1.33
PABPN1-203ENST00000553960 PHF5AQ7RTV0 110 aaKnown RBP6.75□□□□□ -1.33
PABPN1-203ENST00000553960 ORMDL1Q9P0S3 153 aa6.75□□□□□ -1.33
PABPN1-203ENST00000553960 BAALC-AS2P0C853 105 aa6.74□□□□□ -1.33
PABPN1-203ENST00000553960 Q9BRP9 147 aa6.74□□□□□ -1.33
PABPN1-203ENST00000553960 SPRR1BP22528 89 aa6.73□□□□□ -1.33
PABPN1-203ENST00000553960 KRTAP11-1Q8IUC1 163 aa6.73□□□□□ -1.33
PABPN1-203ENST00000553960 CIRBP-AS1Q8TBR5 109 aa6.73□□□□□ -1.33
PABPN1-203ENST00000553960 FAM30AQ9NZY2 134 aa6.73□□□□□ -1.33
PABPN1-203ENST00000553960 DNAH8Q96JB1 4490 aa6.72□□□□□ -1.33
PABPN1-203ENST00000553960 UBE2BP63146 152 aa6.72□□□□□ -1.33
PABPN1-203ENST00000553960 DNAH5Q8TE73 4624 aa6.72□□□□□ -1.33
PABPN1-203ENST00000553960 JMJD7-PLA2G4BH0Y9G9 81 aa6.71□□□□□ -1.34
PABPN1-203ENST00000553960 LINC01547P58512 204 aaPredicted RBP6.71□□□□□ -1.34
PABPN1-203ENST00000553960 Q6ZQY7 126 aa6.71□□□□□ -1.34
PABPN1-203ENST00000553960 SCXQ7RTU7 201 aa6.71□□□□□ -1.34
PABPN1-203ENST00000553960 SMCR5Q8TEV8 140 aa6.71□□□□□ -1.34
PABPN1-203ENST00000553960 DPH3Q96FX2 82 aa6.71□□□□□ -1.34
PABPN1-203ENST00000553960 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.34
PABPN1-203ENST00000553960 KRTAP3-2Q9BYR7 98 aa6.71□□□□□ -1.34
PABPN1-203ENST00000553960 ETDBQ3ZM63 59 aa6.7□□□□□ -1.34
PABPN1-203ENST00000553960 PDE6GP18545 87 aa6.69□□□□□ -1.34
PABPN1-203ENST00000553960 PSORS1C2Q9UIG4 136 aa6.69□□□□□ -1.34
PABPN1-203ENST00000553960 ZNF861PO60384 105 aa6.68□□□□□ -1.34
PABPN1-203ENST00000553960 PKHD1P08F94 4074 aa6.68□□□□□ -1.34
PABPN1-203ENST00000553960 IGLV8-61A0A075B6I0 122 aa6.67□□□□□ -1.34
PABPN1-203ENST00000553960 TEX49A0A1B0GTD5 131 aa6.67□□□□□ -1.34
PABPN1-203ENST00000553960 FAM240AA0A1B0GVK7 77 aa6.67□□□□□ -1.34
PABPN1-203ENST00000553960 A0A1B0GW54 56 aa6.67□□□□□ -1.34
PABPN1-203ENST00000553960 FAM19A1Q7Z5A9 133 aa6.67□□□□□ -1.34
PABPN1-203ENST00000553960 Q8N377 158 aa6.67□□□□□ -1.34
PABPN1-203ENST00000553960 J3QR89 54 aa6.66□□□□□ -1.34
PABPN1-203ENST00000553960 FUSP35637 526 aaKnown RBP eCLIP6.66□□□□□ -1.34
PABPN1-203ENST00000553960 LINC00483Q53H64 154 aa6.66□□□□□ -1.34
PABPN1-203ENST00000553960 LOC110117498A0A087WWA1 95 aa6.65□□□□□ -1.34
PABPN1-203ENST00000553960 K7ERU9 68 aa6.65□□□□□ -1.34
PABPN1-203ENST00000553960 ERC2-IT1O76042 136 aa6.65□□□□□ -1.34
PABPN1-203ENST00000553960 IGLV7-43P04211 117 aa6.65□□□□□ -1.34
PABPN1-203ENST00000553960 TRBV7-4A0A0J9YYF1 115 aa6.64□□□□□ -1.35
PABPN1-203ENST00000553960 CDK2AP2O75956 126 aa6.64□□□□□ -1.35
PABPN1-203ENST00000553960 UBE2AP49459 152 aa6.64□□□□□ -1.35
PABPN1-203ENST00000553960 XGP55808 180 aa6.64□□□□□ -1.35
PABPN1-203ENST00000553960 NDUFV3P56181 108 aaKnown RBP6.64□□□□□ -1.35
PABPN1-203ENST00000553960 RPL37AP61513 92 aaKnown RBP6.64□□□□□ -1.35
PABPN1-203ENST00000553960 ZNF706Q9Y5V0 76 aaPredicted RBP6.64□□□□□ -1.35
PABPN1-203ENST00000553960 ACYP1P07311 99 aa6.63□□□□□ -1.35
PABPN1-203ENST00000553960 PRLHP81277 87 aa6.63□□□□□ -1.35
PABPN1-203ENST00000553960 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
PABPN1-203ENST00000553960 RBM3P98179 157 aaKnown RBP6.62□□□□□ -1.35
PABPN1-203ENST00000553960 SMIM29Q86T20 159 aa6.62□□□□□ -1.35
PABPN1-203ENST00000553960 LRP1BQ9NZR2 4599 aa6.62□□□□□ -1.35
PABPN1-203ENST00000553960 C1orf137Q5JT78 98 aa6.61□□□□□ -1.35
PABPN1-203ENST00000553960 SPRR4Q96PI1 79 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms