RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 RETNLBQ9BQ08 111 aa8.89□□□□□ -0.99
BRF1-220ENST00000552127 IGLV6-57P01721 117 aa8.88□□□□□ -0.99
BRF1-220ENST00000552127 S100A7L2Q5SY68 101 aa8.88□□□□□ -0.99
BRF1-220ENST00000552127 EIF4EBP3O60516 100 aaPredicted RBP8.87□□□□□ -0.99
BRF1-220ENST00000552127 C3orf79P0CE67 100 aa8.87□□□□□ -0.99
BRF1-220ENST00000552127 COA6Q5JTJ3 125 aaKnown RBP8.87□□□□□ -0.99
BRF1-220ENST00000552127 TRAV23DV6A0A075B6W5 121 aa8.86□□□□□ -0.99
BRF1-220ENST00000552127 KRTAP9-7A8MTY7 169 aa8.86□□□□□ -0.99
BRF1-220ENST00000552127 LINC00483Q53H64 154 aa8.86□□□□□ -0.99
BRF1-220ENST00000552127 Q6ZRX8 168 aa8.86□□□□□ -0.99
BRF1-220ENST00000552127 LITAFQ99732 161 aa8.86□□□□□ -0.99
BRF1-220ENST00000552127 PPDPFQ9H3Y8 114 aa8.86□□□□□ -0.99
BRF1-220ENST00000552127 TIMM17BO60830 172 aa8.85□□□□□ -0.99
BRF1-220ENST00000552127 Q9BRP9 147 aa8.85□□□□□ -0.99
BRF1-220ENST00000552127 CDIP1Q9H305 208 aa8.85□□□□□ -0.99
BRF1-220ENST00000552127 ZNF815PA8K554 130 aa8.84□□□□□ -0.99
BRF1-220ENST00000552127 ERC2-IT1O76042 136 aa8.84□□□□□ -0.99
BRF1-220ENST00000552127 KRTDAPP60985 99 aa8.84□□□□□ -0.99
BRF1-220ENST00000552127 SPAG11AQ6PDA7 123 aa8.84□□□□□ -0.99
BRF1-220ENST00000552127 GAGE2AQ6NT46 116 aa8.83□□□□□ -1
BRF1-220ENST00000552127 Q8NBF4 154 aa8.83□□□□□ -1
BRF1-220ENST00000552127 LINC00308Q8TCZ7 52 aa8.83□□□□□ -1
BRF1-220ENST00000552127 SPANXCQ9NY87 97 aa8.83□□□□□ -1
BRF1-220ENST00000552127 ZNF73O43830 326 aaPredicted RBP8.82□□□□□ -1
BRF1-220ENST00000552127 TTTY13Q9BZ97 58 aa8.82□□□□□ -1
BRF1-220ENST00000552127 JOSD1Q15040 202 aaPredicted RBP8.81□□□□□ -1
BRF1-220ENST00000552127 C4orf48Q5BLP8 95 aa8.81□□□□□ -1
BRF1-220ENST00000552127 CBY1Q9Y3M2 126 aa8.81□□□□□ -1
BRF1-220ENST00000552127 C20orf202A1L168 122 aa8.8□□□□□ -1
BRF1-220ENST00000552127 IGLV7-46A0A075B6I9 117 aa8.79□□□□□ -1
BRF1-220ENST00000552127 TPRXLQ17RH7 258 aa8.79□□□□□ -1
BRF1-220ENST00000552127 IGLV9-49A0A0B4J1Y8 123 aa8.78□□□□□ -1
BRF1-220ENST00000552127 MOBPQ13875 183 aa8.78□□□□□ -1
BRF1-220ENST00000552127 OR13C6PQ8NH95 151 aa8.77□□□□□ -1.01
BRF1-220ENST00000552127 SPANXDQ9BXN6 97 aa8.77□□□□□ -1.01
BRF1-220ENST00000552127 HINT1P49773 126 aaPredicted RBP8.76□□□□□ -1.01
BRF1-220ENST00000552127 ANKRD39Q53RE8 183 aa8.76□□□□□ -1.01
BRF1-220ENST00000552127 SPINK1P00995 79 aa8.75□□□□□ -1.01
BRF1-220ENST00000552127 SCGB1D4Q6XE38 83 aa8.75□□□□□ -1.01
BRF1-220ENST00000552127 ATOH7Q8N100 152 aa8.75□□□□□ -1.01
BRF1-220ENST00000552127 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.74□□□□□ -1.01
BRF1-220ENST00000552127 AKR1D1P51857 326 aa8.74□□□□□ -1.01
BRF1-220ENST00000552127 FP248Q71RG6 208 aaPredicted RBP8.74□□□□□ -1.01
BRF1-220ENST00000552127 SSBP3-AS1Q7Z2R9 100 aa8.74□□□□□ -1.01
BRF1-220ENST00000552127 C5orf52A6NGY3 159 aa8.73□□□□□ -1.01
BRF1-220ENST00000552127 LINC00518Q8N0U6 118 aa8.73□□□□□ -1.01
BRF1-220ENST00000552127 ST20-AS1Q8NBB2 130 aa8.73□□□□□ -1.01
BRF1-220ENST00000552127 RPS29P62273 56 aaKnown RBP8.71□□□□□ -1.02
BRF1-220ENST00000552127 C9orf153Q5TBE3 101 aa8.71□□□□□ -1.02
BRF1-220ENST00000552127 COPS9Q8WXC6 57 aa8.71□□□□□ -1.02
BRF1-220ENST00000552127 DHRS4-AS1Q9P1J3 65 aa8.71□□□□□ -1.02
BRF1-220ENST00000552127 PCP2Q8IVA1 136 aa8.7□□□□□ -1.02
BRF1-220ENST00000552127 IFITM1P13164 125 aa8.69□□□□□ -1.02
BRF1-220ENST00000552127 COX7BP24311 80 aa8.69□□□□□ -1.02
BRF1-220ENST00000552127 ELOF1P60002 83 aaKnown RBP8.69□□□□□ -1.02
BRF1-220ENST00000552127 C6orf99Q4VX62 202 aa8.69□□□□□ -1.02
BRF1-220ENST00000552127 Q6ZVH6 145 aa8.69□□□□□ -1.02
BRF1-220ENST00000552127 KRTAP4-1Q9BYQ7 146 aa8.69□□□□□ -1.02
BRF1-220ENST00000552127 S100A6P06703 90 aa8.68□□□□□ -1.02
BRF1-220ENST00000552127 SPRR1BP22528 89 aa8.68□□□□□ -1.02
BRF1-220ENST00000552127 SNRPEP62304 92 aaKnown RBP8.68□□□□□ -1.02
BRF1-220ENST00000552127 HIST3H2BBQ8N257 126 aa8.68□□□□□ -1.02
BRF1-220ENST00000552127 Q8N377 158 aa8.67□□□□□ -1.02
BRF1-220ENST00000552127 S100A2P29034 98 aa8.66□□□□□ -1.02
BRF1-220ENST00000552127 KRTAP13-3Q3SY46 172 aa8.66□□□□□ -1.02
BRF1-220ENST00000552127 HIST1H2BLQ99880 126 aa8.66□□□□□ -1.02
BRF1-220ENST00000552127 TRBV7-6A0A0J9YX20 115 aa8.65□□□□□ -1.02
BRF1-220ENST00000552127 SLC25A34Q6PIV7 304 aa8.65□□□□□ -1.02
BRF1-220ENST00000552127 MUSTN1Q8IVN3 82 aa8.65□□□□□ -1.02
BRF1-220ENST00000552127 TMA7Q9Y2S6 64 aaKnown RBP8.65□□□□□ -1.02
BRF1-220ENST00000552127 A6NDN8 102 aa8.64□□□□□ -1.03
BRF1-220ENST00000552127 SLC25A20O43772 301 aa8.64□□□□□ -1.03
BRF1-220ENST00000552127 ASB16-AS1Q495Z4 193 aa8.63□□□□□ -1.03
BRF1-220ENST00000552127 A0A1B0GWB2 263 aa8.62□□□□□ -1.03
BRF1-220ENST00000552127 LAMTOR3Q9UHA4 124 aa8.62□□□□□ -1.03
BRF1-220ENST00000552127 HSBP1L1C9JCN9 74 aa8.61□□□□□ -1.03
BRF1-220ENST00000552127 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
BRF1-220ENST00000552127 TRAV13-2A0A0B4J235 113 aa8.59□□□□□ -1.03
BRF1-220ENST00000552127 TAL2Q16559 108 aa8.59□□□□□ -1.03
BRF1-220ENST00000552127 DEFB105AQ8NG35 78 aa8.59□□□□□ -1.03
BRF1-220ENST00000552127 TEX49A0A1B0GTD5 131 aa8.58□□□□□ -1.04
BRF1-220ENST00000552127 Q1RN00 199 aa8.58□□□□□ -1.04
BRF1-220ENST00000552127 A4D1N5 150 aa8.57□□□□□ -1.04
BRF1-220ENST00000552127 CFC1BP0CG36 223 aa8.57□□□□□ -1.04
BRF1-220ENST00000552127 SMIM11BQ8TCY0 68 aa8.57□□□□□ -1.04
BRF1-220ENST00000552127 LIMD2Q9BT23 127 aa8.57□□□□□ -1.04
BRF1-220ENST00000552127 IGLV5-48A0A075B6I7 105 aa8.56□□□□□ -1.04
BRF1-220ENST00000552127 MT1HP80294 61 aa8.56□□□□□ -1.04
BRF1-220ENST00000552127 HRCT1Q6UXD1 115 aa8.56□□□□□ -1.04
BRF1-220ENST00000552127 LORP23490 312 aaPredicted RBP8.55□□□□□ -1.04
BRF1-220ENST00000552127 NHP2Q9NX24 153 aaKnown RBP8.55□□□□□ -1.04
BRF1-220ENST00000552127 SMIM29Q86T20 159 aa8.54□□□□□ -1.04
BRF1-220ENST00000552127 PRO1933Q9H354 126 aa8.54□□□□□ -1.04
BRF1-220ENST00000552127 CD164Q04900 197 aa8.53□□□□□ -1.04
BRF1-220ENST00000552127 SCGB1D1O95968 90 aa8.52□□□□□ -1.05
BRF1-220ENST00000552127 KRTAP10-6P60371 365 aaPredicted RBP8.51□□□□□ -1.05
BRF1-220ENST00000552127 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
BRF1-220ENST00000552127 KRTAP19-2Q3LHN2 52 aa8.5□□□□□ -1.05
BRF1-220ENST00000552127 H7C2G1 150 aa8.49□□□□□ -1.05
BRF1-220ENST00000552127 VAMP3Q15836 100 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms