RNA–Protein interactions for RNA: ENST00000550790.1

PACS2-210, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 3

Gene PACS2, Length 1,163 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-210ENST00000550790 NDUFC2O95298 119 aa11.91□□□□□ -0.5
PACS2-210ENST00000550790 NMUP48645 174 aa11.91□□□□□ -0.5
PACS2-210ENST00000550790 MOBPQ13875 183 aa11.91□□□□□ -0.5
PACS2-210ENST00000550790 Q8N377 158 aa11.91□□□□□ -0.5
PACS2-210ENST00000550790 PMCHL2Q9BQD1 86 aa11.91□□□□□ -0.5
PACS2-210ENST00000550790 SPANXB1Q9NS25 103 aaPredicted RBP11.91□□□□□ -0.5
PACS2-210ENST00000550790 DPM2O94777 84 aa11.9□□□□□ -0.5
PACS2-210ENST00000550790 IGLV9-49A0A0B4J1Y8 123 aa11.89□□□□□ -0.51
PACS2-210ENST00000550790 LINC01545Q5VT33 79 aa11.89□□□□□ -0.51
PACS2-210ENST00000550790 KRTAP4-1Q9BYQ7 146 aa11.89□□□□□ -0.51
PACS2-210ENST00000550790 EIF4EBP3O60516 100 aaPredicted RBP11.88□□□□□ -0.51
PACS2-210ENST00000550790 C3orf79P0CE67 100 aa11.88□□□□□ -0.51
PACS2-210ENST00000550790 IGKCP01834 107 aa11.87□□□□□ -0.51
PACS2-210ENST00000550790 SOSTDC1Q6X4U4 206 aa11.87□□□□□ -0.51
PACS2-210ENST00000550790 HIST3H2BBQ8N257 126 aa11.87□□□□□ -0.51
PACS2-210ENST00000550790 HERVK_113P61574 105 aa11.86□□□□□ -0.51
PACS2-210ENST00000550790 ADAMTSL4-AS1Q5T5F5 129 aa11.86□□□□□ -0.51
PACS2-210ENST00000550790 LGALS3P17931 250 aaKnown RBP11.85□□□□□ -0.51
PACS2-210ENST00000550790 PET117Q6UWS5 81 aa11.85□□□□□ -0.51
PACS2-210ENST00000550790 SLC25A20O43772 301 aa11.84□□□□□ -0.51
PACS2-210ENST00000550790 S100A7L2Q5SY68 101 aa11.84□□□□□ -0.51
PACS2-210ENST00000550790 MIEN1Q9BRT3 115 aa11.84□□□□□ -0.51
PACS2-210ENST00000550790 TRAV23DV6A0A075B6W5 121 aa11.83□□□□□ -0.52
PACS2-210ENST00000550790 A0A0J9YXY3 114 aa11.83□□□□□ -0.52
PACS2-210ENST00000550790 JOSD1Q15040 202 aaPredicted RBP11.82□□□□□ -0.52
PACS2-210ENST00000550790 HIST1H2BLQ99880 126 aa11.82□□□□□ -0.52
PACS2-210ENST00000550790 ZNF73O43830 326 aaPredicted RBP11.81□□□□□ -0.52
PACS2-210ENST00000550790 SEC61BP60468 96 aaKnown RBP11.81□□□□□ -0.52
PACS2-210ENST00000550790 E9PLD3 99 aa11.8□□□□□ -0.52
PACS2-210ENST00000550790 C5orf52A6NGY3 159 aa11.79□□□□□ -0.52
PACS2-210ENST00000550790 ST20-AS1Q8NBB2 130 aa11.79□□□□□ -0.52
PACS2-210ENST00000550790 KRTDAPP60985 99 aa11.78□□□□□ -0.52
PACS2-210ENST00000550790 NPC2P61916 151 aa11.78□□□□□ -0.52
PACS2-210ENST00000550790 XP32Q5T750 250 aa11.78□□□□□ -0.52
PACS2-210ENST00000550790 LITAFQ99732 161 aa11.77□□□□□ -0.53
PACS2-210ENST00000550790 SNRPEP62304 92 aaKnown RBP11.76□□□□□ -0.53
PACS2-210ENST00000550790 KRTAP9-6A0A140TA67 174 aa11.74□□□□□ -0.53
PACS2-210ENST00000550790 C9orf153Q5TBE3 101 aa11.74□□□□□ -0.53
PACS2-210ENST00000550790 S100A6P06703 90 aa11.73□□□□□ -0.53
PACS2-210ENST00000550790 SPRR1BP22528 89 aa11.73□□□□□ -0.53
PACS2-210ENST00000550790 LINC00308Q8TCZ7 52 aa11.73□□□□□ -0.53
PACS2-210ENST00000550790 LINC01547P58512 204 aaPredicted RBP11.72□□□□□ -0.53
PACS2-210ENST00000550790 CBY1Q9Y3M2 126 aa11.72□□□□□ -0.53
PACS2-210ENST00000550790 SPANXCQ9NY87 97 aa11.71□□□□□ -0.53
PACS2-210ENST00000550790 TIMM17BO60830 172 aa11.7□□□□□ -0.54
PACS2-210ENST00000550790 S100A2P29034 98 aa11.7□□□□□ -0.54
PACS2-210ENST00000550790 HINT1P49773 126 aaPredicted RBP11.7□□□□□ -0.54
PACS2-210ENST00000550790 ANKRD39Q53RE8 183 aa11.68□□□□□ -0.54
PACS2-210ENST00000550790 C20orf202A1L168 122 aa11.67□□□□□ -0.54
PACS2-210ENST00000550790 ATOH7Q8N100 152 aa11.67□□□□□ -0.54
PACS2-210ENST00000550790 DHRS4-AS1Q9P1J3 65 aa11.67□□□□□ -0.54
PACS2-210ENST00000550790 LCE2CQ5TA81 110 aa11.66□□□□□ -0.54
PACS2-210ENST00000550790 OR13C6PQ8NH95 151 aa11.66□□□□□ -0.54
PACS2-210ENST00000550790 TTTY13Q9BZ97 58 aa11.66□□□□□ -0.54
PACS2-210ENST00000550790 SPANXDQ9BXN6 97 aa11.65□□□□□ -0.54
PACS2-210ENST00000550790 SLC25A34Q6PIV7 304 aa11.63□□□□□ -0.55
PACS2-210ENST00000550790 AKR1D1P51857 326 aa11.62□□□□□ -0.55
PACS2-210ENST00000550790 ELOF1P60002 83 aaKnown RBP11.62□□□□□ -0.55
PACS2-210ENST00000550790 LCE2DQ5TA82 110 aaPredicted RBP11.62□□□□□ -0.55
PACS2-210ENST00000550790 KRTAP19-2Q3LHN2 52 aa11.61□□□□□ -0.55
PACS2-210ENST00000550790 LAMTOR3Q9UHA4 124 aa11.61□□□□□ -0.55
PACS2-210ENST00000550790 ZNF815PA8K554 130 aa11.6□□□□□ -0.55
PACS2-210ENST00000550790 HRCT1Q6UXD1 115 aa11.6□□□□□ -0.55
PACS2-210ENST00000550790 LINC00518Q8N0U6 118 aa11.6□□□□□ -0.55
PACS2-210ENST00000550790 LIMD2Q9BT23 127 aa11.6□□□□□ -0.55
PACS2-210ENST00000550790 COX7BP24311 80 aa11.59□□□□□ -0.55
PACS2-210ENST00000550790 C6orf99Q4VX62 202 aa11.58□□□□□ -0.56
PACS2-210ENST00000550790 CD164Q04900 197 aa11.56□□□□□ -0.56
PACS2-210ENST00000550790 PCP2Q8IVA1 136 aa11.56□□□□□ -0.56
PACS2-210ENST00000550790 TRBV7-6A0A0J9YX20 115 aa11.55□□□□□ -0.56
PACS2-210ENST00000550790 TAL2Q16559 108 aa11.54□□□□□ -0.56
PACS2-210ENST00000550790 PCOTHQ58A44 107 aa11.54□□□□□ -0.56
PACS2-210ENST00000550790 SMIM29Q86T20 159 aa11.54□□□□□ -0.56
PACS2-210ENST00000550790 TEX49A0A1B0GTD5 131 aa11.53□□□□□ -0.56
PACS2-210ENST00000550790 DEFB105AQ8NG35 78 aa11.53□□□□□ -0.56
PACS2-210ENST00000550790 PRO1933Q9H354 126 aa11.53□□□□□ -0.56
PACS2-210ENST00000550790 FSIP2Q5CZC0 6907 aa11.53□□□□□ -0.56
PACS2-210ENST00000550790 Q1RN00 199 aa11.52□□□□□ -0.57
PACS2-210ENST00000550790 Q5XG85 94 aa11.52□□□□□ -0.57
PACS2-210ENST00000550790 C9orf92A6NGG3 77 aa11.51□□□□□ -0.57
PACS2-210ENST00000550790 SCGB1D1O95968 90 aa11.51□□□□□ -0.57
PACS2-210ENST00000550790 TMA7Q9Y2S6 64 aaKnown RBP11.51□□□□□ -0.57
PACS2-210ENST00000550790 IGLV8-61A0A075B6I0 122 aa11.48□□□□□ -0.57
PACS2-210ENST00000550790 IGLV5-48A0A075B6I7 105 aa11.48□□□□□ -0.57
PACS2-210ENST00000550790 A0A1B0GWB2 263 aa11.47□□□□□ -0.57
PACS2-210ENST00000550790 H7C2G1 150 aa11.47□□□□□ -0.57
PACS2-210ENST00000550790 IFITM1P13164 125 aa11.47□□□□□ -0.57
PACS2-210ENST00000550790 MT1HP80294 61 aa11.47□□□□□ -0.57
PACS2-210ENST00000550790 C1orf195Q5TG92 126 aa11.46□□□□□ -0.57
PACS2-210ENST00000550790 SCGB1D4Q6XE38 83 aa11.45□□□□□ -0.58
PACS2-210ENST00000550790 HSBP1L1C9JCN9 74 aa11.44□□□□□ -0.58
PACS2-210ENST00000550790 PYY3Q5JQD4 70 aa11.44□□□□□ -0.58
PACS2-210ENST00000550790 Q6ZVH6 145 aa11.44□□□□□ -0.58
PACS2-210ENST00000550790 MUSTN1Q8IVN3 82 aa11.44□□□□□ -0.58
PACS2-210ENST00000550790 COPS9Q8WXC6 57 aa11.44□□□□□ -0.58
PACS2-210ENST00000550790 A0A0G2JQZ4 141 aa11.43□□□□□ -0.58
PACS2-210ENST00000550790 A6NDN8 102 aa11.42□□□□□ -0.58
PACS2-210ENST00000550790 COX8AP10176 69 aa11.41□□□□□ -0.58
PACS2-210ENST00000550790 A4D1N5 150 aa11.39□□□□□ -0.59
PACS2-210ENST00000550790 DLEU1O43261 78 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms