RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 DPM2O94777 84 aa12.81□□□□□ -0.36
SMARCD1-209ENST00000550477 KRTAP4-1Q9BYQ7 146 aa12.81□□□□□ -0.36
SMARCD1-209ENST00000550477 ZNF73O43830 326 aaPredicted RBP12.8□□□□□ -0.36
SMARCD1-209ENST00000550477 SLC25A34Q6PIV7 304 aa12.79□□□□□ -0.36
SMARCD1-209ENST00000550477 YPEL4Q96NS1 127 aa12.79□□□□□ -0.36
SMARCD1-209ENST00000550477 IGKCP01834 107 aa12.77□□□□□ -0.37
SMARCD1-209ENST00000550477 LIMD2Q9BT23 127 aa12.77□□□□□ -0.37
SMARCD1-209ENST00000550477 LCE2DQ5TA82 110 aaPredicted RBP12.76□□□□□ -0.37
SMARCD1-209ENST00000550477 SERF1AO75920 110 aa12.73□□□□□ -0.37
SMARCD1-209ENST00000550477 TRGC2P03986 189 aa12.73□□□□□ -0.37
SMARCD1-209ENST00000550477 FABP4P15090 132 aa12.73□□□□□ -0.37
SMARCD1-209ENST00000550477 NPC2P61916 151 aa12.73□□□□□ -0.37
SMARCD1-209ENST00000550477 ST20-AS1Q8NBB2 130 aa12.72□□□□□ -0.37
SMARCD1-209ENST00000550477 PMCHL2Q9BQD1 86 aa12.71□□□□□ -0.37
SMARCD1-209ENST00000550477 OR13C6PQ8NH95 151 aa12.7□□□□□ -0.38
SMARCD1-209ENST00000550477 DHRS4-AS1Q9P1J3 65 aa12.7□□□□□ -0.38
SMARCD1-209ENST00000550477 LAMTOR3Q9UHA4 124 aa12.7□□□□□ -0.38
SMARCD1-209ENST00000550477 A0A0J9YXY3 114 aa12.69□□□□□ -0.38
SMARCD1-209ENST00000550477 ADAMTSL4-AS1Q5T5F5 129 aa12.67□□□□□ -0.38
SMARCD1-209ENST00000550477 SOSTDC1Q6X4U4 206 aa12.67□□□□□ -0.38
SMARCD1-209ENST00000550477 SPANXCQ9NY87 97 aa12.67□□□□□ -0.38
SMARCD1-209ENST00000550477 SPRR1BP22528 89 aa12.66□□□□□ -0.38
SMARCD1-209ENST00000550477 HRCT1Q6UXD1 115 aa12.66□□□□□ -0.38
SMARCD1-209ENST00000550477 E9PLD3 99 aa12.65□□□□□ -0.38
SMARCD1-209ENST00000550477 LINC00310P59036 64 aa12.63□□□□□ -0.39
SMARCD1-209ENST00000550477 IGLV8-61A0A075B6I0 122 aa12.62□□□□□ -0.39
SMARCD1-209ENST00000550477 PCOTHQ58A44 107 aa12.62□□□□□ -0.39
SMARCD1-209ENST00000550477 EIF4EBP3O60516 100 aaPredicted RBP12.61□□□□□ -0.39
SMARCD1-209ENST00000550477 TAL2Q16559 108 aa12.61□□□□□ -0.39
SMARCD1-209ENST00000550477 LINC00308Q8TCZ7 52 aa12.61□□□□□ -0.39
SMARCD1-209ENST00000550477 SPANXDQ9BXN6 97 aa12.61□□□□□ -0.39
SMARCD1-209ENST00000550477 LINC00518Q8N0U6 118 aa12.6□□□□□ -0.39
SMARCD1-209ENST00000550477 C9orf92A6NGG3 77 aa12.59□□□□□ -0.39
SMARCD1-209ENST00000550477 CFC1BP0CG36 223 aa12.59□□□□□ -0.39
SMARCD1-209ENST00000550477 CRCT1Q9UGL9 99 aa12.59□□□□□ -0.39
SMARCD1-209ENST00000550477 TIMM17BO60830 172 aa12.58□□□□□ -0.4
SMARCD1-209ENST00000550477 COX7BP24311 80 aa12.58□□□□□ -0.4
SMARCD1-209ENST00000550477 CD164Q04900 197 aa12.58□□□□□ -0.4
SMARCD1-209ENST00000550477 PRO1933Q9H354 126 aa12.58□□□□□ -0.4
SMARCD1-209ENST00000550477 LCE2CQ5TA81 110 aa12.56□□□□□ -0.4
SMARCD1-209ENST00000550477 H7C2G1 150 aa12.55□□□□□ -0.4
SMARCD1-209ENST00000550477 TEX49A0A1B0GTD5 131 aa12.54□□□□□ -0.4
SMARCD1-209ENST00000550477 ELOF1P60002 83 aaKnown RBP12.54□□□□□ -0.4
SMARCD1-209ENST00000550477 DEFB105AQ8NG35 78 aa12.54□□□□□ -0.4
SMARCD1-209ENST00000550477 FSIP2Q5CZC0 6907 aa12.53□□□□□ -0.4
SMARCD1-209ENST00000550477 AKR1D1P51857 326 aa12.52□□□□□ -0.41
SMARCD1-209ENST00000550477 Q1RN00 199 aa12.52□□□□□ -0.41
SMARCD1-209ENST00000550477 C6orf99Q4VX62 202 aa12.52□□□□□ -0.41
SMARCD1-209ENST00000550477 LITAFQ99732 161 aa12.52□□□□□ -0.41
SMARCD1-209ENST00000550477 ZNF815PA8K554 130 aa12.51□□□□□ -0.41
SMARCD1-209ENST00000550477 SYS1-DBNDD2H3BUS1 97 aa12.51□□□□□ -0.41
SMARCD1-209ENST00000550477 MT1HP80294 61 aa12.49□□□□□ -0.41
SMARCD1-209ENST00000550477 COPS9Q8WXC6 57 aa12.49□□□□□ -0.41
SMARCD1-209ENST00000550477 Q5XG85 94 aa12.48□□□□□ -0.41
SMARCD1-209ENST00000550477 TRBV7-6A0A0J9YX20 115 aa12.47□□□□□ -0.41
SMARCD1-209ENST00000550477 KRTAP19-2Q3LHN2 52 aa12.47□□□□□ -0.41
SMARCD1-209ENST00000550477 PET117Q6UWS5 81 aa12.45□□□□□ -0.42
SMARCD1-209ENST00000550477 A0A1B0GWB2 263 aa12.44□□□□□ -0.42
SMARCD1-209ENST00000550477 COLCA2A8K830 154 aa12.44□□□□□ -0.42
SMARCD1-209ENST00000550477 LINC01545Q5VT33 79 aa12.44□□□□□ -0.42
SMARCD1-209ENST00000550477 SCGB1D4Q6XE38 83 aa12.42□□□□□ -0.42
SMARCD1-209ENST00000550477 M0R2T5 61 aa12.41□□□□□ -0.42
SMARCD1-209ENST00000550477 C1orf195Q5TG92 126 aa12.4□□□□□ -0.42
SMARCD1-209ENST00000550477 A4D1N5 150 aa12.39□□□□□ -0.43
SMARCD1-209ENST00000550477 A6NDN8 102 aa12.39□□□□□ -0.43
SMARCD1-209ENST00000550477 TCL1BO95988 128 aa12.39□□□□□ -0.43
SMARCD1-209ENST00000550477 COX6B2Q6YFQ2 88 aa12.39□□□□□ -0.43
SMARCD1-209ENST00000550477 NHP2Q9NX24 153 aaKnown RBP12.39□□□□□ -0.43
SMARCD1-209ENST00000550477 IFITM1P13164 125 aa12.37□□□□□ -0.43
SMARCD1-209ENST00000550477 RPL37P61927 97 aaKnown RBP12.37□□□□□ -0.43
SMARCD1-209ENST00000550477 SMIM29Q86T20 159 aa12.37□□□□□ -0.43
SMARCD1-209ENST00000550477 IGLV5-48A0A075B6I7 105 aa12.36□□□□□ -0.43
SMARCD1-209ENST00000550477 TTTY13Q9BZ97 58 aa12.36□□□□□ -0.43
SMARCD1-209ENST00000550477 Q6ZVH6 145 aa12.35□□□□□ -0.43
SMARCD1-209ENST00000550477 HIST1H2BKO60814 126 aa12.33□□□□□ -0.44
SMARCD1-209ENST00000550477 HIST1H2BJP06899 126 aa12.33□□□□□ -0.44
SMARCD1-209ENST00000550477 HIST1H2BOP23527 126 aa12.33□□□□□ -0.44
SMARCD1-209ENST00000550477 HIST1H2BBP33778 126 aa12.33□□□□□ -0.44
SMARCD1-209ENST00000550477 HIST1H2BDP58876 126 aa12.33□□□□□ -0.44
SMARCD1-209ENST00000550477 HIST1H2BCP62807 126 aa12.33□□□□□ -0.44
SMARCD1-209ENST00000550477 HIST2H2BEQ16778 126 aa12.33□□□□□ -0.44
SMARCD1-209ENST00000550477 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.33□□□□□ -0.44
SMARCD1-209ENST00000550477 HIST1H2BHQ93079 126 aa12.33□□□□□ -0.44
SMARCD1-209ENST00000550477 HIST1H2BNQ99877 126 aa12.33□□□□□ -0.44
SMARCD1-209ENST00000550477 HIST1H2BMQ99879 126 aa12.33□□□□□ -0.44
SMARCD1-209ENST00000550477 LORP23490 312 aaPredicted RBP12.32□□□□□ -0.44
SMARCD1-209ENST00000550477 KRTAP10-6P60371 365 aaPredicted RBP12.32□□□□□ -0.44
SMARCD1-209ENST00000550477 F8WEM9 126 aa12.31□□□□□ -0.44
SMARCD1-209ENST00000550477 TRAV13-2A0A0B4J235 113 aa12.3□□□□□ -0.44
SMARCD1-209ENST00000550477 C20orf202A1L168 122 aa12.3□□□□□ -0.44
SMARCD1-209ENST00000550477 C3orf79P0CE67 100 aa12.29□□□□□ -0.44
SMARCD1-209ENST00000550477 A0A0G2JQZ4 141 aa12.28□□□□□ -0.44
SMARCD1-209ENST00000550477 KRTDAPP60985 99 aa12.28□□□□□ -0.44
SMARCD1-209ENST00000550477 VAMP3Q15836 100 aa12.27□□□□□ -0.45
SMARCD1-209ENST00000550477 MUSTN1Q8IVN3 82 aa12.27□□□□□ -0.45
SMARCD1-209ENST00000550477 SLC7A5P1Q8MH63 180 aa12.26□□□□□ -0.45
SMARCD1-209ENST00000550477 SMIM11BQ8TCY0 68 aa12.22□□□□□ -0.45
SMARCD1-209ENST00000550477 Q6JHZ5 121 aa12.2□□□□□ -0.46
SMARCD1-209ENST00000550477 PCP2Q8IVA1 136 aa12.2□□□□□ -0.46
SMARCD1-209ENST00000550477 ANKRD39Q53RE8 183 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 215 ms