RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 A0A096LNI7 61 aa13.44□□□□□ -0.26
PRDM4-205ENST00000550376 LOC107984640A0A0U1RRK4 108 aa13.44□□□□□ -0.26
PRDM4-205ENST00000550376 FAM240AA0A1B0GVK7 77 aa13.42□□□□□ -0.26
PRDM4-205ENST00000550376 FUSP35637 526 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRDM4-205ENST00000550376 NDUFV3P56181 108 aaKnown RBP13.41□□□□□ -0.26
PRDM4-205ENST00000550376 LAMTOR3Q9UHA4 124 aa13.41□□□□□ -0.26
PRDM4-205ENST00000550376 CHTF8P0CG12 524 aa13.41□□□□□ -0.26
PRDM4-205ENST00000550376 LINC00528Q8N1L1 170 aa13.41□□□□□ -0.26
PRDM4-205ENST00000550376 KCNQ1DNQ9H478 68 aa13.4□□□□□ -0.26
PRDM4-205ENST00000550376 CCDC179H3BU77 68 aa13.39□□□□□ -0.27
PRDM4-205ENST00000550376 DNAH2Q9P225 4427 aa13.39□□□□□ -0.27
PRDM4-205ENST00000550376 A0A1W2PNN7 141 aa13.38□□□□□ -0.27
PRDM4-205ENST00000550376 LRCOL1A6NCL2 159 aa13.38□□□□□ -0.27
PRDM4-205ENST00000550376 IGLV1-50A0A075B6I6 118 aa13.38□□□□□ -0.27
PRDM4-205ENST00000550376 SRRM2Q9UQ35 2752 aaKnown RBP13.37□□□□□ -0.27
PRDM4-205ENST00000550376 MRPL55Q7Z7F7 128 aaKnown RBP13.37□□□□□ -0.27
PRDM4-205ENST00000550376 PLA2G2DQ9UNK4 145 aa13.37□□□□□ -0.27
PRDM4-205ENST00000550376 CNBPP62633 177 aaKnown RBP13.37□□□□□ -0.27
PRDM4-205ENST00000550376 Q6ZRN7 208 aaPredicted RBP13.36□□□□□ -0.27
PRDM4-205ENST00000550376 DEFB105AQ8NG35 78 aa13.35□□□□□ -0.27
PRDM4-205ENST00000550376 LINC00846Q9NV44 126 aa13.35□□□□□ -0.27
PRDM4-205ENST00000550376 TRBV7-6A0A0J9YX20 115 aa13.34□□□□□ -0.27
PRDM4-205ENST00000550376 ACYP1P07311 99 aa13.34□□□□□ -0.27
PRDM4-205ENST00000550376 JMJD7-PLA2G4BH0Y9G9 81 aa13.33□□□□□ -0.27
PRDM4-205ENST00000550376 IGLV5-37A0A075B6J1 123 aa13.32□□□□□ -0.28
PRDM4-205ENST00000550376 C16orf90A8MZG2 172 aa13.32□□□□□ -0.28
PRDM4-205ENST00000550376 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.32□□□□□ -0.28
PRDM4-205ENST00000550376 RBM3P98179 157 aaKnown RBP13.31□□□□□ -0.28
PRDM4-205ENST00000550376 CCKP06307 115 aa13.31□□□□□ -0.28
PRDM4-205ENST00000550376 Q9BRP9 147 aa13.31□□□□□ -0.28
PRDM4-205ENST00000550376 KRTAP4-16G5E9R7 235 aaPredicted RBP13.29□□□□□ -0.28
PRDM4-205ENST00000550376 ETDCA0A1B0GVM5 59 aa13.28□□□□□ -0.28
PRDM4-205ENST00000550376 PANO1I0J062 215 aa13.28□□□□□ -0.28
PRDM4-205ENST00000550376 C14orf177Q52M58 125 aa13.28□□□□□ -0.28
PRDM4-205ENST00000550376 Q6Q795 121 aa13.28□□□□□ -0.28
PRDM4-205ENST00000550376 Q6ZRX8 168 aa13.27□□□□□ -0.28
PRDM4-205ENST00000550376 ST20-AS1Q8NBB2 130 aa13.27□□□□□ -0.28
PRDM4-205ENST00000550376 ERC2-IT1O76042 136 aa13.27□□□□□ -0.29
PRDM4-205ENST00000550376 C3orf22Q8N5N4 141 aa13.27□□□□□ -0.29
PRDM4-205ENST00000550376 SDIM1Q6ZPB5 146 aa13.26□□□□□ -0.29
PRDM4-205ENST00000550376 KRTAP11-1Q8IUC1 163 aa13.26□□□□□ -0.29
PRDM4-205ENST00000550376 PHF5AQ7RTV0 110 aaKnown RBP13.26□□□□□ -0.29
PRDM4-205ENST00000550376 C9orf163Q8N9P6 203 aa13.26□□□□□ -0.29
PRDM4-205ENST00000550376 HECTD4Q9Y4D8 3996 aa13.25□□□□□ -0.29
PRDM4-205ENST00000550376 PRYO14603 147 aa13.25□□□□□ -0.29
PRDM4-205ENST00000550376 SPRR1AP35321 89 aa13.25□□□□□ -0.29
PRDM4-205ENST00000550376 Q6ZQT0 140 aa13.25□□□□□ -0.29
PRDM4-205ENST00000550376 LINC00643Q86TS7 51 aa13.25□□□□□ -0.29
PRDM4-205ENST00000550376 LY6G6CO95867 125 aa13.24□□□□□ -0.29
PRDM4-205ENST00000550376 SMIM20Q8N5G0 67 aa13.24□□□□□ -0.29
PRDM4-205ENST00000550376 IGKV3D-7A0A0C4DH55 119 aa13.24□□□□□ -0.29
PRDM4-205ENST00000550376 REG3GQ6UW15 175 aa13.23□□□□□ -0.29
PRDM4-205ENST00000550376 DPH3Q96FX2 82 aa13.23□□□□□ -0.29
PRDM4-205ENST00000550376 DSCR8Q96T75 97 aa13.23□□□□□ -0.29
PRDM4-205ENST00000550376 UBE2BP63146 152 aa13.23□□□□□ -0.29
PRDM4-205ENST00000550376 Q8N377 158 aa13.22□□□□□ -0.29
PRDM4-205ENST00000550376 PRLHP81277 87 aa13.21□□□□□ -0.29
PRDM4-205ENST00000550376 A0A087WTM6 91 aa13.2□□□□□ -0.3
PRDM4-205ENST00000550376 Q6ZR54 194 aa13.19□□□□□ -0.3
PRDM4-205ENST00000550376 LINC01547P58512 204 aaPredicted RBP13.19□□□□□ -0.3
PRDM4-205ENST00000550376 DHRS4-AS1Q9P1J3 65 aa13.18□□□□□ -0.3
PRDM4-205ENST00000550376 LOC110117498A0A087WWA1 95 aa13.17□□□□□ -0.3
PRDM4-205ENST00000550376 FAM19A1Q7Z5A9 133 aa13.17□□□□□ -0.3
PRDM4-205ENST00000550376 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.17□□□□□ -0.3
PRDM4-205ENST00000550376 TRBV7-7A0A0K0K1E9 115 aa13.16□□□□□ -0.3
PRDM4-205ENST00000550376 TRBV7-4A0A0J9YYF1 115 aa13.14□□□□□ -0.31
PRDM4-205ENST00000550376 H3BQ85 93 aa13.13□□□□□ -0.31
PRDM4-205ENST00000550376 HIGD2AQ9BW72 106 aa13.13□□□□□ -0.31
PRDM4-205ENST00000550376 HYDINQ4G0P3 5121 aa13.13□□□□□ -0.31
PRDM4-205ENST00000550376 GHRHP01286 108 aa13.12□□□□□ -0.31
PRDM4-205ENST00000550376 DNAH17Q9UFH2 4485 aa13.1□□□□□ -0.31
PRDM4-205ENST00000550376 A0A087WVE0 104 aa13.1□□□□□ -0.31
PRDM4-205ENST00000550376 KRTAP21-3Q3LHN1 58 aa13.1□□□□□ -0.31
PRDM4-205ENST00000550376 FAM236AA0A1B0GUQ0 79 aa13.09□□□□□ -0.31
PRDM4-205ENST00000550376 FAM236BA0A1B0GV22 79 aa13.09□□□□□ -0.31
PRDM4-205ENST00000550376 C1orf134Q5TEV5 83 aa13.09□□□□□ -0.31
PRDM4-205ENST00000550376 RTL8CO15255 209 aa13.09□□□□□ -0.31
PRDM4-205ENST00000550376 A0A0G2JQZ4 141 aa13.08□□□□□ -0.32
PRDM4-205ENST00000550376 DNAH6Q9C0G6 4158 aa13.07□□□□□ -0.32
PRDM4-205ENST00000550376 UBL5Q9BZL1 73 aa13.07□□□□□ -0.32
PRDM4-205ENST00000550376 Q6JHZ5 121 aa13.06□□□□□ -0.32
PRDM4-205ENST00000550376 WWC2-AS2Q96NR7 200 aa13.06□□□□□ -0.32
PRDM4-205ENST00000550376 EPM2AB3EWF7 344 aa13.04□□□□□ -0.32
PRDM4-205ENST00000550376 HIST1H4AP62805 103 aaKnown RBP13.04□□□□□ -0.32
PRDM4-205ENST00000550376 TNP2Q05952 138 aa13.04□□□□□ -0.32
PRDM4-205ENST00000550376 SPACA4Q8TDM5 124 aa13.04□□□□□ -0.32
PRDM4-205ENST00000550376 LINC00476Q8WZB0 136 aa13.04□□□□□ -0.32
PRDM4-205ENST00000550376 IGLV5-48A0A075B6I7 105 aa13.04□□□□□ -0.32
PRDM4-205ENST00000550376 PDE6GP18545 87 aa13.04□□□□□ -0.32
PRDM4-205ENST00000550376 HAMPP81172 84 aa13.04□□□□□ -0.32
PRDM4-205ENST00000550376 Q6ZVQ6 151 aa13.04□□□□□ -0.32
PRDM4-205ENST00000550376 IMUPQ9GZP8 106 aa13.04□□□□□ -0.32
PRDM4-205ENST00000550376 LINC00474Q9P2X8 69 aa13.03□□□□□ -0.32
PRDM4-205ENST00000550376 C3orf84H3BNL1 204 aa13.03□□□□□ -0.32
PRDM4-205ENST00000550376 SCXQ7RTU7 201 aa13.01□□□□□ -0.33
PRDM4-205ENST00000550376 SMIM29Q86T20 159 aa13.01□□□□□ -0.33
PRDM4-205ENST00000550376 DNAH8Q96JB1 4490 aa13.01□□□□□ -0.33
PRDM4-205ENST00000550376 FRAS1Q86XX4 4008 aa13□□□□□ -0.33
PRDM4-205ENST00000550376 IGLV5-52A0A0A0MRZ9 124 aa12.99□□□□□ -0.33
PRDM4-205ENST00000550376 UBE2AP49459 152 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms