RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 MTURNQ8N3F0 131 aa12.86□□□□□ -0.35
CTDSP2-204ENST00000548823 DNAH8Q96JB1 4490 aa12.85□□□□□ -0.35
CTDSP2-204ENST00000548823 H3BT86 120 aa12.85□□□□□ -0.35
CTDSP2-204ENST00000548823 ETDBQ3ZM63 59 aa12.85□□□□□ -0.35
CTDSP2-204ENST00000548823 Q8NDZ9 215 aa12.85□□□□□ -0.35
CTDSP2-204ENST00000548823 FAT3Q8TDW7 4589 aa12.84□□□□□ -0.35
CTDSP2-204ENST00000548823 RNF213Q63HN8 5207 aa12.84□□□□□ -0.35
CTDSP2-204ENST00000548823 PRR3P79522 188 aaKnown RBP12.83□□□□□ -0.36
CTDSP2-204ENST00000548823 TEN1Q86WV5 123 aa12.83□□□□□ -0.36
CTDSP2-204ENST00000548823 ANKRD29Q8N6D5 301 aa12.83□□□□□ -0.36
CTDSP2-204ENST00000548823 IGLV6-57P01721 117 aa12.81□□□□□ -0.36
CTDSP2-204ENST00000548823 NCR3O14931 201 aa12.81□□□□□ -0.36
CTDSP2-204ENST00000548823 SLPIP03973 132 aa12.81□□□□□ -0.36
CTDSP2-204ENST00000548823 VPREB1P12018 145 aa12.81□□□□□ -0.36
CTDSP2-204ENST00000548823 S100A7L2Q5SY68 101 aa12.81□□□□□ -0.36
CTDSP2-204ENST00000548823 XAGE1AQ9HD64 81 aa12.81□□□□□ -0.36
CTDSP2-204ENST00000548823 A0A1B0GX51 115 aa12.8□□□□□ -0.36
CTDSP2-204ENST00000548823 LRCOL1A6NCL2 159 aa12.8□□□□□ -0.36
CTDSP2-204ENST00000548823 Q6ZRP5 223 aa12.8□□□□□ -0.36
CTDSP2-204ENST00000548823 J3QR89 54 aa12.79□□□□□ -0.36
CTDSP2-204ENST00000548823 C14orf177Q52M58 125 aa12.79□□□□□ -0.36
CTDSP2-204ENST00000548823 FAM218AQ96MZ4 157 aa12.79□□□□□ -0.36
CTDSP2-204ENST00000548823 Q6ZSA8 131 aa12.78□□□□□ -0.36
CTDSP2-204ENST00000548823 CBY1Q9Y3M2 126 aa12.78□□□□□ -0.36
CTDSP2-204ENST00000548823 M0R378 163 aa12.77□□□□□ -0.37
CTDSP2-204ENST00000548823 RPL18AQ02543 176 aaKnown RBP12.77□□□□□ -0.37
CTDSP2-204ENST00000548823 Q8N814 137 aa12.77□□□□□ -0.37
CTDSP2-204ENST00000548823 PPDPFLQ8WWR9 84 aa12.77□□□□□ -0.37
CTDSP2-204ENST00000548823 PSCAO43653 123 aa12.76□□□□□ -0.37
CTDSP2-204ENST00000548823 KRTAP10-4P60372 401 aaPredicted RBP12.75□□□□□ -0.37
CTDSP2-204ENST00000548823 GAGE2EQ4V326 116 aa12.75□□□□□ -0.37
CTDSP2-204ENST00000548823 GAGE2DQ9UEU5 116 aa12.75□□□□□ -0.37
CTDSP2-204ENST00000548823 CNBPP62633 177 aaKnown RBP12.74□□□□□ -0.37
CTDSP2-204ENST00000548823 C9orf129Q5T035 196 aaKnown RBP12.74□□□□□ -0.37
CTDSP2-204ENST00000548823 LOC107984640A0A0U1RRK4 108 aa12.73□□□□□ -0.37
CTDSP2-204ENST00000548823 IGLV5-37A0A075B6J1 123 aa12.71□□□□□ -0.37
CTDSP2-204ENST00000548823 LECT2O14960 151 aa12.71□□□□□ -0.37
CTDSP2-204ENST00000548823 C6orf99Q4VX62 202 aa12.71□□□□□ -0.37
CTDSP2-204ENST00000548823 A0A087WYN8 130 aa12.7□□□□□ -0.38
CTDSP2-204ENST00000548823 TRBV7-6A0A0J9YX20 115 aa12.7□□□□□ -0.38
CTDSP2-204ENST00000548823 TRBV10-3A0A0K0K1G6 114 aa12.7□□□□□ -0.38
CTDSP2-204ENST00000548823 DNAL4O96015 105 aa12.7□□□□□ -0.38
CTDSP2-204ENST00000548823 LINC00167Q96N53 147 aa12.7□□□□□ -0.38
CTDSP2-204ENST00000548823 SNCGO76070 127 aa12.69□□□□□ -0.38
CTDSP2-204ENST00000548823 TRAV23DV6A0A075B6W5 121 aa12.69□□□□□ -0.38
CTDSP2-204ENST00000548823 BAALC-AS2P0C853 105 aa12.69□□□□□ -0.38
CTDSP2-204ENST00000548823 LRP2P98164 4655 aa12.68□□□□□ -0.38
CTDSP2-204ENST00000548823 SCXQ7RTU7 201 aa12.67□□□□□ -0.38
CTDSP2-204ENST00000548823 DIRC1Q969H9 104 aa12.67□□□□□ -0.38
CTDSP2-204ENST00000548823 PKIGQ9Y2B9 76 aa12.67□□□□□ -0.38
CTDSP2-204ENST00000548823 LINC00575Q6W349 94 aa12.66□□□□□ -0.38
CTDSP2-204ENST00000548823 NKAPP1Q8N9T2 125 aa12.66□□□□□ -0.38
CTDSP2-204ENST00000548823 ZNF73O43830 326 aaPredicted RBP12.64□□□□□ -0.39
CTDSP2-204ENST00000548823 PKHD1L1Q86WI1 4243 aa12.63□□□□□ -0.39
CTDSP2-204ENST00000548823 GAGE2BQ13066 116 aa12.62□□□□□ -0.39
CTDSP2-204ENST00000548823 KCNQ1DNQ9H478 68 aa12.62□□□□□ -0.39
CTDSP2-204ENST00000548823 ORMDL1Q9P0S3 153 aa12.62□□□□□ -0.39
CTDSP2-204ENST00000548823 C22orf24Q9Y442 160 aa12.62□□□□□ -0.39
CTDSP2-204ENST00000548823 TEX49A0A1B0GTD5 131 aa12.61□□□□□ -0.39
CTDSP2-204ENST00000548823 H3BQ85 93 aa12.6□□□□□ -0.39
CTDSP2-204ENST00000548823 ELOF1P60002 83 aaKnown RBP12.6□□□□□ -0.39
CTDSP2-204ENST00000548823 C7orf33Q8WU49 177 aa12.6□□□□□ -0.39
CTDSP2-204ENST00000548823 VPS25Q9BRG1 176 aa12.6□□□□□ -0.39
CTDSP2-204ENST00000548823 hADV29S1A0JD25 119 aa12.59□□□□□ -0.39
CTDSP2-204ENST00000548823 COX7BP24311 80 aa12.59□□□□□ -0.39
CTDSP2-204ENST00000548823 C9orf163Q8N9P6 203 aa12.58□□□□□ -0.4
CTDSP2-204ENST00000548823 MT1HL1P0DM35 61 aa12.57□□□□□ -0.4
CTDSP2-204ENST00000548823 PRYO14603 147 aa12.56□□□□□ -0.4
CTDSP2-204ENST00000548823 KRTAP7-1Q8IUC3 87 aa12.56□□□□□ -0.4
CTDSP2-204ENST00000548823 TMEM256-PLSCR3K7ERE1 68 aa12.56□□□□□ -0.4
CTDSP2-204ENST00000548823 CIRBP-AS1Q8TBR5 109 aa12.56□□□□□ -0.4
CTDSP2-204ENST00000548823 OBSCN-AS1Q96MR7 158 aa12.56□□□□□ -0.4
CTDSP2-204ENST00000548823 IGLV1-50A0A075B6I6 118 aa12.55□□□□□ -0.4
CTDSP2-204ENST00000548823 A0A096LNI7 61 aa12.54□□□□□ -0.4
CTDSP2-204ENST00000548823 FAM168BA1KXE4 195 aa12.54□□□□□ -0.4
CTDSP2-204ENST00000548823 GHRHP01286 108 aa12.54□□□□□ -0.4
CTDSP2-204ENST00000548823 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.53□□□□□ -0.4
CTDSP2-204ENST00000548823 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.53□□□□□ -0.4
CTDSP2-204ENST00000548823 MRPL55Q7Z7F7 128 aaKnown RBP12.53□□□□□ -0.4
CTDSP2-204ENST00000548823 FAM240AA0A1B0GVK7 77 aa12.52□□□□□ -0.41
CTDSP2-204ENST00000548823 SPRR1AP35321 89 aa12.52□□□□□ -0.41
CTDSP2-204ENST00000548823 TNXBP22105 4242 aa12.51□□□□□ -0.41
CTDSP2-204ENST00000548823 RPL37AP61513 92 aaKnown RBP12.51□□□□□ -0.41
CTDSP2-204ENST00000548823 LINC00474Q9P2X8 69 aa12.5□□□□□ -0.41
CTDSP2-204ENST00000548823 FAM19A5Q7Z5A7 132 aaPredicted RBP12.49□□□□□ -0.41
CTDSP2-204ENST00000548823 KRTAP4-16G5E9R7 235 aaPredicted RBP12.48□□□□□ -0.41
CTDSP2-204ENST00000548823 JMJD7-PLA2G4BH0Y9G9 81 aa12.48□□□□□ -0.41
CTDSP2-204ENST00000548823 SDIM1Q6ZPB5 146 aa12.48□□□□□ -0.41
CTDSP2-204ENST00000548823 ACYP1P07311 99 aa12.47□□□□□ -0.41
CTDSP2-204ENST00000548823 Q6ZQY7 126 aa12.46□□□□□ -0.41
CTDSP2-204ENST00000548823 CDIP1Q9H305 208 aa12.46□□□□□ -0.41
CTDSP2-204ENST00000548823 IGKV2-24A0A0C4DH68 120 aa12.44□□□□□ -0.42
CTDSP2-204ENST00000548823 A0A1W2PNN7 141 aa12.44□□□□□ -0.42
CTDSP2-204ENST00000548823 DHRS4-AS1Q9P1J3 65 aa12.44□□□□□ -0.42
CTDSP2-204ENST00000548823 RPL37AP8A6NKH3 93 aa12.43□□□□□ -0.42
CTDSP2-204ENST00000548823 B5MCH6 92 aa12.43□□□□□ -0.42
CTDSP2-204ENST00000548823 Q6ZRX8 168 aa12.43□□□□□ -0.42
CTDSP2-204ENST00000548823 ETDCA0A1B0GVM5 59 aa12.42□□□□□ -0.42
CTDSP2-204ENST00000548823 REG3GQ6UW15 175 aa12.41□□□□□ -0.42
CTDSP2-204ENST00000548823 SIGMAR1Q99720 223 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms