RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 CPSF4LA6NMK7 179 aaKnown RBP-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 MIF4GDA9UHW6 222 aaKnown RBP-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 TMEM262E9PQX1 116 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 M0R3E3 92 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 FXYD1O00168 92 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 DEGS1O15121 323 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 YPEL1O60688 119 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 CYB5AP00167 134 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 TCRAP04437 139 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 FABP2P12104 132 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 SERPINB1P30740 379 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 SPRR1AP35321 89 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 CRIP1P50238 77 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 B2MP61769 119 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 HMGN3Q15651 99 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 RHOHQ15669 191 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 SSBP3-AS1Q7Z2R9 100 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 MMGT1Q8N4V1 131 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 OR51A4Q8NGJ6 313 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 AGPAT4-IT1Q9H0P7 198 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 TAF9BQ9HBM6 251 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 NDUFA4L2Q9NRX3 87 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 IL20Q9NYY1 176 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 MRPL35Q9NZE8 188 aaKnown RBP-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 NOP16Q9Y3C1 178 aaKnown RBP-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 V9GYS6 101 aa-0.15□□□□□ -2.43
CCDC38-206ENST00000548771 TRBV7-3A0A075B6L6 115 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 A0A087WWC5 75 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 D6R8Y8 96 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 H3BQ15 152 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 K7EQZ3 153 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 APOC4-APOC2K7ER74 178 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 M0QZ58 72 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 M0R2P5 195 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 GNG7O60262 68 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 CFDP00746 253 aaPredicted RBP-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 APOC2P02655 101 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 DBIP07108 87 aaKnown RBP-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 TPT1P13693 172 aaKnown RBP-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 HIST1H1BP16401 226 aaKnown RBP-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 FGF7P21781 194 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 TAS2R41P59536 307 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 SPAG11BQ08648 103 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 IQCJQ1A5X6 159 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 Q5BKY6 102 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 C9orf153Q5TBE3 101 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 SAMD13Q5VXD3 122 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 IZUMO2Q6UXV1 221 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 C5orf38Q86SI9 138 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 OR5H6Q8NGV6 325 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 DYDC1Q8WWB3 177 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 CLEC2BQ92478 149 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 TMEM203Q969S6 136 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 SPTSSAQ969W0 71 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 AQP10Q96PS8 301 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 AMELXQ99217 191 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 DPY30Q9C005 99 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 NAA60Q9H7X0 242 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 RPRMQ9NS64 109 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 IER3IP1Q9Y5U9 82 aa-0.16□□□□□ -2.44
CCDC38-206ENST00000548771 IGLV5-48A0A075B6I7 105 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 TRBV6-1A0A0K0K1D8 114 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 PNMA8CA0A1B0GUJ8 204 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 LOC101927531A0A1B0GV80 90 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 F6UZH7 168 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 M0R129 80 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 E2F6O75461 281 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 PRM1P04553 51 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 SLC25A5P05141 298 aaKnown RBP-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 LINC00032P0C843 101 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 TRAPPC2P0DI81 140 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 TRAPPC2BP0DI82 140 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 IGLC2P0DOY2 106 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 RBP2P50120 134 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 COPZ1P61923 177 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 RPL38P63173 70 aaKnown RBP-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 Q6AWC8 147 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 ALKAL2Q6UX46 152 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 SMIM20Q8N5G0 67 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 OTOSQ8NHW6 89 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 THEM6Q8WUY1 208 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 C1orf54Q8WWF1 131 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 MAFIPQ8WZ33 124 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 LSM10Q969L4 123 aaKnown RBP-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 ARHGAP5-AS1Q96IT6 56 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 CGREF1Q99674 301 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 BANF2Q9H503 90 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 BET1LQ9NYM9 111 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 COMMD3Q9UBI1 195 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 DNAJC15Q9Y5T4 150 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 V9GYQ6 96 aa-0.17□□□□□ -2.44
CCDC38-206ENST00000548771 TRBV25-1A0A075B6N4 114 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 IGHV1-24A0A0C4DH33 117 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 TRBV7-7A0A0K0K1E9 115 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 TRBV10-3A0A0K0K1G6 114 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 HIGD1CA8MV81 97 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 F8WEM9 126 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 M0QY20 66 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 NDUFA1O15239 70 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 PYYP10082 97 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms