RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 Q8N377 158 aa6.45□□□□□ -1.38
SMARCD1-205ENST00000548573 IGKV2D-24A0A075B6R9 120 aa6.45□□□□□ -1.38
SMARCD1-205ENST00000548573 SMIM26A0A096LP01 95 aa6.45□□□□□ -1.38
SMARCD1-205ENST00000548573 TLX1NBP0CAT3 122 aa6.45□□□□□ -1.38
SMARCD1-205ENST00000548573 OCR1Q9BZK8 76 aa6.45□□□□□ -1.38
SMARCD1-205ENST00000548573 PLA2G2DQ9UNK4 145 aa6.45□□□□□ -1.38
SMARCD1-205ENST00000548573 ITPR2Q14571 2701 aa6.44□□□□□ -1.38
SMARCD1-205ENST00000548573 Q8N9L7 120 aa6.44□□□□□ -1.38
SMARCD1-205ENST00000548573 C7orf33Q8WU49 177 aa6.44□□□□□ -1.38
SMARCD1-205ENST00000548573 SERTAD4-AS1Q5TG53 156 aa6.43□□□□□ -1.38
SMARCD1-205ENST00000548573 RETNQ9HD89 108 aa6.43□□□□□ -1.38
SMARCD1-205ENST00000548573 DHRS4-AS1Q9P1J3 65 aa6.43□□□□□ -1.38
SMARCD1-205ENST00000548573 C3orf84H3BNL1 204 aa6.43□□□□□ -1.38
SMARCD1-205ENST00000548573 Q6ZRX8 168 aa6.42□□□□□ -1.38
SMARCD1-205ENST00000548573 DEFB105AQ8NG35 78 aa6.42□□□□□ -1.38
SMARCD1-205ENST00000548573 A0A0U1RQV1 116 aa6.41□□□□□ -1.38
SMARCD1-205ENST00000548573 FUSP35637 526 aaKnown RBP eCLIP6.41□□□□□ -1.38
SMARCD1-205ENST00000548573 IGLV5-37A0A075B6J1 123 aa6.41□□□□□ -1.38
SMARCD1-205ENST00000548573 KRTAP4-16G5E9R7 235 aaPredicted RBP6.41□□□□□ -1.38
SMARCD1-205ENST00000548573 PRYO14603 147 aa6.41□□□□□ -1.38
SMARCD1-205ENST00000548573 DNAH10OSP0CZ25 163 aa6.4□□□□□ -1.38
SMARCD1-205ENST00000548573 SPRR1AP35321 89 aa6.4□□□□□ -1.38
SMARCD1-205ENST00000548573 TNP2Q05952 138 aa6.4□□□□□ -1.38
SMARCD1-205ENST00000548573 FP248Q71RG6 208 aaPredicted RBP6.4□□□□□ -1.38
SMARCD1-205ENST00000548573 HELZ2Q9BYK8 2649 aaKnown RBP6.4□□□□□ -1.39
SMARCD1-205ENST00000548573 UNC79Q9P2D8 2635 aa6.4□□□□□ -1.39
SMARCD1-205ENST00000548573 IGLV1-50A0A075B6I6 118 aa6.4□□□□□ -1.39
SMARCD1-205ENST00000548573 DEFB131BA0A096LNP1 70 aa6.4□□□□□ -1.39
SMARCD1-205ENST00000548573 A0A1W2PNM2 257 aa6.39□□□□□ -1.39
SMARCD1-205ENST00000548573 Q9BRP9 147 aa6.39□□□□□ -1.39
SMARCD1-205ENST00000548573 HIVEP1P15822 2718 aa6.39□□□□□ -1.39
SMARCD1-205ENST00000548573 KRTAP10-11P60412 298 aa6.38□□□□□ -1.39
SMARCD1-205ENST00000548573 ETDCA0A1B0GVM5 59 aa6.38□□□□□ -1.39
SMARCD1-205ENST00000548573 OXLD1Q5BKU9 147 aa6.38□□□□□ -1.39
SMARCD1-205ENST00000548573 C1orf137Q5JT78 98 aa6.38□□□□□ -1.39
SMARCD1-205ENST00000548573 Q8NBF4 154 aa6.38□□□□□ -1.39
SMARCD1-205ENST00000548573 MRAPQ8TCY5 172 aa6.38□□□□□ -1.39
SMARCD1-205ENST00000548573 SPRR4Q96PI1 79 aa6.38□□□□□ -1.39
SMARCD1-205ENST00000548573 NOTCH2Q04721 2471 aa6.37□□□□□ -1.39
SMARCD1-205ENST00000548573 C11orf45Q8TAV5 145 aa6.37□□□□□ -1.39
SMARCD1-205ENST00000548573 RPL37AP8A6NKH3 93 aa6.37□□□□□ -1.39
SMARCD1-205ENST00000548573 LCE2DQ5TA82 110 aaPredicted RBP6.37□□□□□ -1.39
SMARCD1-205ENST00000548573 TENM1Q9UKZ4 2725 aa6.37□□□□□ -1.39
SMARCD1-205ENST00000548573 LCE6AA0A183 80 aa6.36□□□□□ -1.39
SMARCD1-205ENST00000548573 FASNP49327 2511 aaKnown RBP6.35□□□□□ -1.39
SMARCD1-205ENST00000548573 SMIM29Q86T20 159 aa6.35□□□□□ -1.39
SMARCD1-205ENST00000548573 FAM168BA1KXE4 195 aa6.35□□□□□ -1.39
SMARCD1-205ENST00000548573 ST20-AS1Q8NBB2 130 aa6.35□□□□□ -1.39
SMARCD1-205ENST00000548573 HIGD2AQ9BW72 106 aa6.35□□□□□ -1.39
SMARCD1-205ENST00000548573 LINC00336Q6ZUF6 198 aa6.34□□□□□ -1.39
SMARCD1-205ENST00000548573 KRTAP7-1Q8IUC3 87 aa6.34□□□□□ -1.39
SMARCD1-205ENST00000548573 LINC00474Q9P2X8 69 aa6.34□□□□□ -1.39
SMARCD1-205ENST00000548573 PRO0628Q9UI54 55 aa6.34□□□□□ -1.39
SMARCD1-205ENST00000548573 MRPL55Q7Z7F7 128 aaKnown RBP6.34□□□□□ -1.4
SMARCD1-205ENST00000548573 FAM30AQ9NZY2 134 aa6.33□□□□□ -1.4
SMARCD1-205ENST00000548573 TRRAPQ9Y4A5 3859 aa6.33□□□□□ -1.4
SMARCD1-205ENST00000548573 DSCR10P59022 87 aa6.32□□□□□ -1.4
SMARCD1-205ENST00000548573 NSD1Q96L73 2696 aaPredicted RBP6.32□□□□□ -1.4
SMARCD1-205ENST00000548573 LINC00588Q9Y4M8 146 aa6.32□□□□□ -1.4
SMARCD1-205ENST00000548573 OTOGQ6ZRI0 2925 aa6.31□□□□□ -1.4
SMARCD1-205ENST00000548573 TEP1Q99973 2627 aaKnown RBP6.31□□□□□ -1.4
SMARCD1-205ENST00000548573 UBE2BP63146 152 aa6.31□□□□□ -1.4
SMARCD1-205ENST00000548573 CASC10Q5T4H9 136 aa6.31□□□□□ -1.4
SMARCD1-205ENST00000548573 FAM229BQ4G0N7 80 aa6.3□□□□□ -1.4
SMARCD1-205ENST00000548573 REG3GQ6UW15 175 aa6.3□□□□□ -1.4
SMARCD1-205ENST00000548573 K7EQZ3 153 aa6.29□□□□□ -1.4
SMARCD1-205ENST00000548573 ZCCHC13Q8WW36 166 aaKnown RBP6.29□□□□□ -1.4
SMARCD1-205ENST00000548573 HECTD1Q9ULT8 2610 aa6.29□□□□□ -1.4
SMARCD1-205ENST00000548573 ATRQ13535 2644 aa6.29□□□□□ -1.4
SMARCD1-205ENST00000548573 LINC00476Q8WZB0 136 aa6.28□□□□□ -1.4
SMARCD1-205ENST00000548573 DNAH1Q9P2D7 4330 aa6.27□□□□□ -1.41
SMARCD1-205ENST00000548573 HCG22E2RYF7 251 aa6.27□□□□□ -1.41
SMARCD1-205ENST00000548573 PKD1L1Q8TDX9 2849 aa6.26□□□□□ -1.41
SMARCD1-205ENST00000548573 hDV103S1A0JD37 113 aa6.26□□□□□ -1.41
SMARCD1-205ENST00000548573 IGLV8-61A0A075B6I0 122 aa6.26□□□□□ -1.41
SMARCD1-205ENST00000548573 PSCAO43653 123 aa6.26□□□□□ -1.41
SMARCD1-205ENST00000548573 IGFL1Q6UW32 110 aa6.26□□□□□ -1.41
SMARCD1-205ENST00000548573 MPLKIPQ8TAP9 179 aa6.26□□□□□ -1.41
SMARCD1-205ENST00000548573 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.24□□□□□ -1.41
SMARCD1-205ENST00000548573 C16orf90A8MZG2 172 aa6.22□□□□□ -1.41
SMARCD1-205ENST00000548573 CYP4F30PQ9H0H9 118 aa6.22□□□□□ -1.41
SMARCD1-205ENST00000548573 ANK2Q01484 3957 aa6.22□□□□□ -1.41
SMARCD1-205ENST00000548573 NDUFB1O75438 58 aa6.22□□□□□ -1.41
SMARCD1-205ENST00000548573 C1orf64Q8NEQ6 169 aa6.22□□□□□ -1.41
SMARCD1-205ENST00000548573 BRK1Q8WUW1 75 aa6.22□□□□□ -1.41
SMARCD1-205ENST00000548573 TENM3Q9P273 2699 aa6.21□□□□□ -1.41
SMARCD1-205ENST00000548573 KRTAP24-1Q3LI83 254 aa6.21□□□□□ -1.41
SMARCD1-205ENST00000548573 A0A096LNI7 61 aa6.21□□□□□ -1.42
SMARCD1-205ENST00000548573 CNBPP62633 177 aaKnown RBP6.21□□□□□ -1.42
SMARCD1-205ENST00000548573 PRLHP81277 87 aa6.21□□□□□ -1.42
SMARCD1-205ENST00000548573 A0A087WSZ3 146 aa6.2□□□□□ -1.42
SMARCD1-205ENST00000548573 A0A0G2JQZ4 141 aa6.2□□□□□ -1.42
SMARCD1-205ENST00000548573 A0A1W2PNN7 141 aa6.2□□□□□ -1.42
SMARCD1-205ENST00000548573 Q1T7F1 81 aa6.2□□□□□ -1.42
SMARCD1-205ENST00000548573 MP68P56378 58 aa6.19□□□□□ -1.42
SMARCD1-205ENST00000548573 KRTAP29-1A8MX34 341 aaPredicted RBP6.18□□□□□ -1.42
SMARCD1-205ENST00000548573 DEFB116Q30KQ4 102 aa6.18□□□□□ -1.42
SMARCD1-205ENST00000548573 IGKV2-24A0A0C4DH68 120 aa6.18□□□□□ -1.42
SMARCD1-205ENST00000548573 H0Y9J4 135 aa6.18□□□□□ -1.42
SMARCD1-205ENST00000548573 SPRR1BP22528 89 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms