RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 CKS1BP61024 79 aa3.87□□□□□ -1.79
CCDC59-203ENST00000548126 RPL18AQ02543 176 aaKnown RBP3.87□□□□□ -1.79
CCDC59-203ENST00000548126 TMEM170BQ5T4T1 132 aa3.87□□□□□ -1.79
CCDC59-203ENST00000548126 Q8NBF4 154 aa3.87□□□□□ -1.79
CCDC59-203ENST00000548126 TMEM223A0PJW6 202 aa3.86□□□□□ -1.79
CCDC59-203ENST00000548126 KRTAP16-1A8MUX0 517 aa3.86□□□□□ -1.79
CCDC59-203ENST00000548126 NDUFC2-KCTD14E9PQ53 114 aa3.86□□□□□ -1.79
CCDC59-203ENST00000548126 MT1HP80294 61 aa3.86□□□□□ -1.79
CCDC59-203ENST00000548126 ASB16-AS1Q495Z4 193 aa3.86□□□□□ -1.79
CCDC59-203ENST00000548126 LBHQ53QV2 105 aaPredicted RBP3.86□□□□□ -1.79
CCDC59-203ENST00000548126 PMCHL2Q9BQD1 86 aa3.86□□□□□ -1.79
CCDC59-203ENST00000548126 USH2AO75445 5202 aa3.85□□□□□ -1.79
CCDC59-203ENST00000548126 A0A1W2PNN7 141 aa3.85□□□□□ -1.79
CCDC59-203ENST00000548126 FAM168BA1KXE4 195 aa3.85□□□□□ -1.79
CCDC59-203ENST00000548126 SYS1-DBNDD2H3BUS1 97 aa3.85□□□□□ -1.79
CCDC59-203ENST00000548126 PLNP26678 52 aa3.85□□□□□ -1.79
CCDC59-203ENST00000548126 C9orf129Q5T035 196 aaKnown RBP3.85□□□□□ -1.79
CCDC59-203ENST00000548126 ZNF625Q96I27 306 aaPredicted RBP3.85□□□□□ -1.79
CCDC59-203ENST00000548126 FAM218AQ96MZ4 157 aa3.85□□□□□ -1.79
CCDC59-203ENST00000548126 RETNLBQ9BQ08 111 aa3.85□□□□□ -1.79
CCDC59-203ENST00000548126 MAP1LC3CQ9BXW4 147 aa3.85□□□□□ -1.79
CCDC59-203ENST00000548126 DPM2O94777 84 aa3.84□□□□□ -1.79
CCDC59-203ENST00000548126 IGKCP01834 107 aa3.84□□□□□ -1.79
CCDC59-203ENST00000548126 C3orf79P0CE67 100 aa3.84□□□□□ -1.79
CCDC59-203ENST00000548126 TSPEAR-AS2P59090 65 aa3.84□□□□□ -1.79
CCDC59-203ENST00000548126 LINC01545Q5VT33 79 aa3.83□□□□□ -1.8
CCDC59-203ENST00000548126 Q6ZVQ6 151 aa3.83□□□□□ -1.8
CCDC59-203ENST00000548126 HIST3H2BBQ8N257 126 aa3.83□□□□□ -1.8
CCDC59-203ENST00000548126 XAGE1AQ9HD64 81 aa3.83□□□□□ -1.8
CCDC59-203ENST00000548126 SFTA2Q6UW10 78 aa3.82□□□□□ -1.8
CCDC59-203ENST00000548126 PHF5AQ7RTV0 110 aaKnown RBP3.82□□□□□ -1.8
CCDC59-203ENST00000548126 FAM19A5Q7Z5A7 132 aaPredicted RBP3.82□□□□□ -1.8
CCDC59-203ENST00000548126 HIST1H2BLQ99880 126 aa3.82□□□□□ -1.8
CCDC59-203ENST00000548126 ERG28Q9UKR5 140 aa3.82□□□□□ -1.8
CCDC59-203ENST00000548126 J3QQQ9 107 aa3.81□□□□□ -1.8
CCDC59-203ENST00000548126 LEPROTO15243 131 aa3.81□□□□□ -1.8
CCDC59-203ENST00000548126 PFN2P35080 140 aa3.81□□□□□ -1.8
CCDC59-203ENST00000548126 DSCR10P59022 87 aa3.81□□□□□ -1.8
CCDC59-203ENST00000548126 KRTDAPP60985 99 aa3.81□□□□□ -1.8
CCDC59-203ENST00000548126 COX17Q14061 63 aa3.81□□□□□ -1.8
CCDC59-203ENST00000548126 KRTAP11-1Q8IUC1 163 aa3.81□□□□□ -1.8
CCDC59-203ENST00000548126 PPDPFQ9H3Y8 114 aa3.81□□□□□ -1.8
CCDC59-203ENST00000548126 NDUFA12Q9UI09 145 aa3.81□□□□□ -1.8
CCDC59-203ENST00000548126 E9PLD3 99 aa3.8□□□□□ -1.8
CCDC59-203ENST00000548126 M0QXV9 152 aa3.8□□□□□ -1.8
CCDC59-203ENST00000548126 KRTAP19-2Q3LHN2 52 aa3.8□□□□□ -1.8
CCDC59-203ENST00000548126 Q8NDZ9 215 aa3.8□□□□□ -1.8
CCDC59-203ENST00000548126 PLEKHB2Q96CS7 222 aa3.8□□□□□ -1.8
CCDC59-203ENST00000548126 SND1-IT1Q9HBX3 110 aa3.8□□□□□ -1.8
CCDC59-203ENST00000548126 MYMXA0A1B0GTQ4 84 aa3.79□□□□□ -1.8
CCDC59-203ENST00000548126 S100A6P06703 90 aa3.79□□□□□ -1.8
CCDC59-203ENST00000548126 SMIM13P0DJ93 91 aa3.79□□□□□ -1.8
CCDC59-203ENST00000548126 HERVK_113P61574 105 aa3.79□□□□□ -1.8
CCDC59-203ENST00000548126 HERV-K104P63124 156 aa3.79□□□□□ -1.8
CCDC59-203ENST00000548126 Q8N377 158 aa3.79□□□□□ -1.8
CCDC59-203ENST00000548126 LINC00337Q8N6G1 96 aa3.79□□□□□ -1.8
CCDC59-203ENST00000548126 TYMSOSQ8TAI1 123 aa3.79□□□□□ -1.8
CCDC59-203ENST00000548126 OCR1Q9BZK8 76 aa3.79□□□□□ -1.8
CCDC59-203ENST00000548126 TP73-AS1Q9UF72 201 aa3.79□□□□□ -1.8
CCDC59-203ENST00000548126 C22orf24Q9Y442 160 aa3.79□□□□□ -1.8
CCDC59-203ENST00000548126 IGKV2D-26A0A0A0MRZ7 120 aa3.78□□□□□ -1.8
CCDC59-203ENST00000548126 A0A0U1RRA0 63 aa3.78□□□□□ -1.8
CCDC59-203ENST00000548126 C20orf202A1L168 122 aa3.78□□□□□ -1.8
CCDC59-203ENST00000548126 LGALS3P17931 250 aaKnown RBP3.78□□□□□ -1.8
CCDC59-203ENST00000548126 S100A2P29034 98 aa3.78□□□□□ -1.8
CCDC59-203ENST00000548126 NMUP48645 174 aa3.78□□□□□ -1.8
CCDC59-203ENST00000548126 LINC00158P58513 81 aa3.78□□□□□ -1.8
CCDC59-203ENST00000548126 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
CCDC59-203ENST00000548126 MRPL55Q7Z7F7 128 aaKnown RBP3.78□□□□□ -1.8
CCDC59-203ENST00000548126 FLGP20930 4061 aaPredicted RBP3.78□□□□□ -1.8
CCDC59-203ENST00000548126 A0A0J9YXY3 114 aa3.77□□□□□ -1.81
CCDC59-203ENST00000548126 MEIG1Q5JSS6 88 aa3.77□□□□□ -1.81
CCDC59-203ENST00000548126 ATOH7Q8N100 152 aa3.77□□□□□ -1.81
CCDC59-203ENST00000548126 MIR7-3HGQ8N6C7 128 aa3.77□□□□□ -1.81
CCDC59-203ENST00000548126 DAND5Q8N907 189 aa3.77□□□□□ -1.81
CCDC59-203ENST00000548126 LINC00167Q96N53 147 aa3.77□□□□□ -1.81
CCDC59-203ENST00000548126 TTTY13Q9BZ97 58 aa3.77□□□□□ -1.81
CCDC59-203ENST00000548126 LOC107984156A0A0G2JMH3 177 aa3.76□□□□□ -1.81
CCDC59-203ENST00000548126 LINC00587B1AMM8 73 aa3.76□□□□□ -1.81
CCDC59-203ENST00000548126 M0R2T5 61 aa3.76□□□□□ -1.81
CCDC59-203ENST00000548126 UBE2BP63146 152 aa3.76□□□□□ -1.81
CCDC59-203ENST00000548126 ARL17AQ8IVW1 177 aa3.76□□□□□ -1.81
CCDC59-203ENST00000548126 RPL37AP8A6NKH3 93 aa3.75□□□□□ -1.81
CCDC59-203ENST00000548126 ZNF815PA8K554 130 aa3.75□□□□□ -1.81
CCDC59-203ENST00000548126 AKR1D1P51857 326 aa3.75□□□□□ -1.81
CCDC59-203ENST00000548126 NDUFV3P56181 108 aaKnown RBP3.75□□□□□ -1.81
CCDC59-203ENST00000548126 NKAPP1Q8N9T2 125 aa3.75□□□□□ -1.81
CCDC59-203ENST00000548126 IGKV2-28A0A075B6P5 120 aa3.74□□□□□ -1.81
CCDC59-203ENST00000548126 IGKV2D-28P01615 120 aa3.74□□□□□ -1.81
CCDC59-203ENST00000548126 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
CCDC59-203ENST00000548126 CTAG1AP78358 180 aa3.74□□□□□ -1.81
CCDC59-203ENST00000548126 SOSTDC1Q6X4U4 206 aa3.74□□□□□ -1.81
CCDC59-203ENST00000548126 PCP2Q8IVA1 136 aa3.74□□□□□ -1.81
CCDC59-203ENST00000548126 BOD1L2Q8IYS8 172 aa3.74□□□□□ -1.81
CCDC59-203ENST00000548126 LINC00304Q8N9R0 145 aa3.74□□□□□ -1.81
CCDC59-203ENST00000548126 NEBP20929 6669 aa3.73□□□□□ -1.81
CCDC59-203ENST00000548126 NCR3O14931 201 aa3.73□□□□□ -1.81
CCDC59-203ENST00000548126 ZNF861PO60384 105 aa3.73□□□□□ -1.81
CCDC59-203ENST00000548126 TIMM17BO60830 172 aa3.73□□□□□ -1.81
CCDC59-203ENST00000548126 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms