RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 ADAMTSL4-AS1Q5T5F5 129 aa6.79□□□□□ -1.32
COPS7A-221ENST00000546229 C9orf153Q5TBE3 101 aa6.79□□□□□ -1.32
COPS7A-221ENST00000546229 C5orf52A6NGY3 159 aa6.78□□□□□ -1.32
COPS7A-221ENST00000546229 HSBP1O75506 76 aa6.78□□□□□ -1.32
COPS7A-221ENST00000546229 NMUP48645 174 aa6.78□□□□□ -1.32
COPS7A-221ENST00000546229 SNAPINO95295 136 aa6.77□□□□□ -1.33
COPS7A-221ENST00000546229 PLNP26678 52 aa6.77□□□□□ -1.33
COPS7A-221ENST00000546229 SVBPQ8N300 66 aa6.77□□□□□ -1.33
COPS7A-221ENST00000546229 LITAFQ99732 161 aa6.77□□□□□ -1.33
COPS7A-221ENST00000546229 A0A0J9YXY3 114 aa6.76□□□□□ -1.33
COPS7A-221ENST00000546229 H0Y8G0 127 aa6.76□□□□□ -1.33
COPS7A-221ENST00000546229 SERF1AO75920 110 aa6.76□□□□□ -1.33
COPS7A-221ENST00000546229 JOSD1Q15040 202 aaPredicted RBP6.76□□□□□ -1.33
COPS7A-221ENST00000546229 PMCHL2Q9BQD1 86 aa6.76□□□□□ -1.33
COPS7A-221ENST00000546229 IGLV8-61A0A075B6I0 122 aa6.75□□□□□ -1.33
COPS7A-221ENST00000546229 LEPROTL1O95214 131 aa6.75□□□□□ -1.33
COPS7A-221ENST00000546229 CFC1BP0CG36 223 aa6.75□□□□□ -1.33
COPS7A-221ENST00000546229 S100A7L2Q5SY68 101 aa6.75□□□□□ -1.33
COPS7A-221ENST00000546229 C9orf92A6NGG3 77 aa6.74□□□□□ -1.33
COPS7A-221ENST00000546229 DPM2O94777 84 aa6.74□□□□□ -1.33
COPS7A-221ENST00000546229 NPC2P61916 151 aa6.74□□□□□ -1.33
COPS7A-221ENST00000546229 MIEN1Q9BRT3 115 aa6.74□□□□□ -1.33
COPS7A-221ENST00000546229 LIMD2Q9BT23 127 aa6.73□□□□□ -1.33
COPS7A-221ENST00000546229 E9PLD3 99 aa6.72□□□□□ -1.33
COPS7A-221ENST00000546229 IGKCP01834 107 aa6.72□□□□□ -1.33
COPS7A-221ENST00000546229 TRGC2P03986 189 aa6.72□□□□□ -1.33
COPS7A-221ENST00000546229 LGALS3P17931 250 aaKnown RBP6.72□□□□□ -1.33
COPS7A-221ENST00000546229 HERVK_113P61574 105 aa6.71□□□□□ -1.34
COPS7A-221ENST00000546229 Q5XG85 94 aa6.71□□□□□ -1.34
COPS7A-221ENST00000546229 ELOF1P60002 83 aaKnown RBP6.7□□□□□ -1.34
COPS7A-221ENST00000546229 CD164Q04900 197 aa6.7□□□□□ -1.34
COPS7A-221ENST00000546229 HRCT1Q6UXD1 115 aa6.7□□□□□ -1.34
COPS7A-221ENST00000546229 LINC00308Q8TCZ7 52 aa6.7□□□□□ -1.34
COPS7A-221ENST00000546229 SPANXCQ9NY87 97 aa6.7□□□□□ -1.34
COPS7A-221ENST00000546229 NDUFA5Q16718 116 aa6.69□□□□□ -1.34
COPS7A-221ENST00000546229 SMIM29Q86T20 159 aa6.69□□□□□ -1.34
COPS7A-221ENST00000546229 DHRS4-AS1Q9P1J3 65 aa6.69□□□□□ -1.34
COPS7A-221ENST00000546229 HSPB8Q9UJY1 196 aa6.69□□□□□ -1.34
COPS7A-221ENST00000546229 TIMM17BO60830 172 aa6.67□□□□□ -1.34
COPS7A-221ENST00000546229 FABP4P15090 132 aa6.67□□□□□ -1.34
COPS7A-221ENST00000546229 RPL37P61927 97 aaKnown RBP6.67□□□□□ -1.34
COPS7A-221ENST00000546229 C1orf195Q5TG92 126 aa6.67□□□□□ -1.34
COPS7A-221ENST00000546229 SPANXDQ9BXN6 97 aa6.67□□□□□ -1.34
COPS7A-221ENST00000546229 SLC25A34Q6PIV7 304 aa6.66□□□□□ -1.34
COPS7A-221ENST00000546229 Q1RN00 199 aa6.65□□□□□ -1.34
COPS7A-221ENST00000546229 LAMTOR3Q9UHA4 124 aa6.65□□□□□ -1.34
COPS7A-221ENST00000546229 CBY1Q9Y3M2 126 aa6.65□□□□□ -1.34
COPS7A-221ENST00000546229 IGLV5-48A0A075B6I7 105 aa6.64□□□□□ -1.35
COPS7A-221ENST00000546229 A0A0G2JQZ4 141 aa6.64□□□□□ -1.35
COPS7A-221ENST00000546229 C6orf99Q4VX62 202 aa6.64□□□□□ -1.35
COPS7A-221ENST00000546229 H7C2G1 150 aa6.63□□□□□ -1.35
COPS7A-221ENST00000546229 COX7BP24311 80 aa6.63□□□□□ -1.35
COPS7A-221ENST00000546229 HINT1P49773 126 aaPredicted RBP6.63□□□□□ -1.35
COPS7A-221ENST00000546229 TTTY13Q9BZ97 58 aa6.63□□□□□ -1.35
COPS7A-221ENST00000546229 PRO1933Q9H354 126 aa6.63□□□□□ -1.35
COPS7A-221ENST00000546229 OR13C6PQ8NH95 151 aa6.62□□□□□ -1.35
COPS7A-221ENST00000546229 TRBV7-6A0A0J9YX20 115 aa6.61□□□□□ -1.35
COPS7A-221ENST00000546229 TEX49A0A1B0GTD5 131 aa6.61□□□□□ -1.35
COPS7A-221ENST00000546229 COLCA2A8K830 154 aa6.61□□□□□ -1.35
COPS7A-221ENST00000546229 SYS1-DBNDD2H3BUS1 97 aa6.61□□□□□ -1.35
COPS7A-221ENST00000546229 LINC01545Q5VT33 79 aa6.61□□□□□ -1.35
COPS7A-221ENST00000546229 DEFB105AQ8NG35 78 aa6.59□□□□□ -1.35
COPS7A-221ENST00000546229 ZNF815PA8K554 130 aa6.58□□□□□ -1.36
COPS7A-221ENST00000546229 AKR1D1P51857 326 aa6.57□□□□□ -1.36
COPS7A-221ENST00000546229 TAL2Q16559 108 aa6.57□□□□□ -1.36
COPS7A-221ENST00000546229 LINC00518Q8N0U6 118 aa6.57□□□□□ -1.36
COPS7A-221ENST00000546229 USH2AO75445 5202 aa6.57□□□□□ -1.36
COPS7A-221ENST00000546229 SSPOA2VEC9 5147 aa6.56□□□□□ -1.36
COPS7A-221ENST00000546229 A0A1B0GWB2 263 aa6.56□□□□□ -1.36
COPS7A-221ENST00000546229 M0R2T5 61 aa6.56□□□□□ -1.36
COPS7A-221ENST00000546229 HIST1H2BKO60814 126 aa6.55□□□□□ -1.36
COPS7A-221ENST00000546229 HIST1H2BJP06899 126 aa6.55□□□□□ -1.36
COPS7A-221ENST00000546229 HIST1H2BOP23527 126 aa6.55□□□□□ -1.36
COPS7A-221ENST00000546229 HIST1H2BBP33778 126 aa6.55□□□□□ -1.36
COPS7A-221ENST00000546229 HIST1H2BDP58876 126 aa6.55□□□□□ -1.36
COPS7A-221ENST00000546229 HIST1H2BCP62807 126 aa6.55□□□□□ -1.36
COPS7A-221ENST00000546229 HIST2H2BEQ16778 126 aa6.55□□□□□ -1.36
COPS7A-221ENST00000546229 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.55□□□□□ -1.36
COPS7A-221ENST00000546229 HIST1H2BHQ93079 126 aa6.55□□□□□ -1.36
COPS7A-221ENST00000546229 HIST1H2BNQ99877 126 aa6.55□□□□□ -1.36
COPS7A-221ENST00000546229 HIST1H2BMQ99879 126 aa6.55□□□□□ -1.36
COPS7A-221ENST00000546229 PET117Q6UWS5 81 aa6.53□□□□□ -1.36
COPS7A-221ENST00000546229 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
COPS7A-221ENST00000546229 C3orf79P0CE67 100 aa6.52□□□□□ -1.37
COPS7A-221ENST00000546229 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.51□□□□□ -1.37
COPS7A-221ENST00000546229 ANKRD39Q53RE8 183 aa6.51□□□□□ -1.37
COPS7A-221ENST00000546229 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
COPS7A-221ENST00000546229 IFITM1P13164 125 aa6.49□□□□□ -1.37
COPS7A-221ENST00000546229 Q75L30 129 aa6.49□□□□□ -1.37
COPS7A-221ENST00000546229 SMIM11BQ8TCY0 68 aa6.49□□□□□ -1.37
COPS7A-221ENST00000546229 A4D1N5 150 aa6.48□□□□□ -1.37
COPS7A-221ENST00000546229 KRTAP9-7A8MTY7 169 aa6.47□□□□□ -1.37
COPS7A-221ENST00000546229 TCL1BO95988 128 aa6.47□□□□□ -1.37
COPS7A-221ENST00000546229 COA6Q5JTJ3 125 aaKnown RBP6.47□□□□□ -1.37
COPS7A-221ENST00000546229 Q6ZVH6 145 aa6.47□□□□□ -1.37
COPS7A-221ENST00000546229 MUSTN1Q8IVN3 82 aa6.47□□□□□ -1.37
COPS7A-221ENST00000546229 TRBV7-7A0A0K0K1E9 115 aa6.46□□□□□ -1.38
COPS7A-221ENST00000546229 A6NDN8 102 aa6.46□□□□□ -1.38
COPS7A-221ENST00000546229 IGFL1Q6UW32 110 aa6.46□□□□□ -1.38
COPS7A-221ENST00000546229 SCGB1D4Q6XE38 83 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms