RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SMAGPQ0VAQ4 97 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 FAM231DQ6ZW35 169 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 SMCR5Q8TEV8 140 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 CCDC32Q9BV29 185 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 HIGD2AQ9BW72 106 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 MAP1LC3BQ9GZQ8 125 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 TMEM191AQ9H0A3 160 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 SPANXA1Q9NS26 97 aa1.13□□□□□ -2.23
SNHG1-224ENST00000545688 CHTOPQ9Y3Y2 248 aaKnown RBP1.13□□□□□ -2.23
SNHG1-224ENST00000545688 ZNF706Q9Y5V0 76 aaPredicted RBP1.13□□□□□ -2.23
SNHG1-224ENST00000545688 ERC2-IT1O76042 136 aa1.12□□□□□ -2.23
SNHG1-224ENST00000545688 DEFA1P59665 94 aa1.12□□□□□ -2.23
SNHG1-224ENST00000545688 HBBP68871 147 aa1.12□□□□□ -2.23
SNHG1-224ENST00000545688 CCL20P78556 96 aa1.12□□□□□ -2.23
SNHG1-224ENST00000545688 CENPWQ5EE01 88 aa1.12□□□□□ -2.23
SNHG1-224ENST00000545688 C1orf195Q5TG92 126 aa1.12□□□□□ -2.23
SNHG1-224ENST00000545688 TRIQKQ629K1 86 aa1.12□□□□□ -2.23
SNHG1-224ENST00000545688 RPL7L1Q6DKI1 246 aaKnown RBP1.12□□□□□ -2.23
SNHG1-224ENST00000545688 Q6Q795 121 aa1.12□□□□□ -2.23
SNHG1-224ENST00000545688 FA2HQ7L5A8 372 aa1.12□□□□□ -2.23
SNHG1-224ENST00000545688 AMELXQ99217 191 aa1.12□□□□□ -2.23
SNHG1-224ENST00000545688 C20orf78Q9BR46 151 aa1.12□□□□□ -2.23
SNHG1-224ENST00000545688 K7EN84 100 aa1.11□□□□□ -2.23
SNHG1-224ENST00000545688 MT1BP07438 61 aa1.11□□□□□ -2.23
SNHG1-224ENST00000545688 PET100P0DJ07 73 aa1.11□□□□□ -2.23
SNHG1-224ENST00000545688 FCER1GP30273 86 aa1.11□□□□□ -2.23
SNHG1-224ENST00000545688 S100A5P33763 92 aa1.11□□□□□ -2.23
SNHG1-224ENST00000545688 CKS1BP61024 79 aa1.11□□□□□ -2.23
SNHG1-224ENST00000545688 CD164Q04900 197 aa1.11□□□□□ -2.23
SNHG1-224ENST00000545688 Q5BKY6 102 aa1.11□□□□□ -2.23
SNHG1-224ENST00000545688 KCNQ1DNQ9H478 68 aa1.11□□□□□ -2.23
SNHG1-224ENST00000545688 A0A1W2PNM2 257 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 LINC00862A6NCI5 91 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 IGIPA6NJ69 53 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 A6NN06 94 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 TCAPO15273 167 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 PPP1R17O96001 155 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 SPRR1BP22528 89 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 SPRR2EP22531 72 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 PFN2P35080 140 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 SPRR2BP35325 72 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 SPRR2AP35326 72 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 SMIM15Q7Z3B0 74 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 AMN1Q8IY45 258 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 SFT2D1Q8WV19 159 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 TMEM141Q96I45 108 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 Q9BRP9 147 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 LIMD2Q9BT23 127 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 EIF5A2Q9GZV4 153 aaKnown RBP1.1□□□□□ -2.23
SNHG1-224ENST00000545688 SND1-IT1Q9HBX3 110 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 BIN3Q9NQY0 253 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 MED9Q9NWA0 146 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 CDKN2A-AS1Q9UH64 79 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 AHNAK2Q8IVF2 5795 aa1.1□□□□□ -2.23
SNHG1-224ENST00000545688 A0A0G2JQZ4 141 aa1.09□□□□□ -2.23
SNHG1-224ENST00000545688 A0A1B0GUT8 65 aa1.09□□□□□ -2.23
SNHG1-224ENST00000545688 PFDN1O60925 122 aa1.09□□□□□ -2.23
SNHG1-224ENST00000545688 GNG4P50150 75 aa1.09□□□□□ -2.23
SNHG1-224ENST00000545688 KRTAP19-8Q3LI54 63 aa1.09□□□□□ -2.23
SNHG1-224ENST00000545688 MRPL51Q4U2R6 128 aaKnown RBP1.09□□□□□ -2.23
SNHG1-224ENST00000545688 C6orf99Q4VX62 202 aa1.09□□□□□ -2.23
SNHG1-224ENST00000545688 C10orf91Q5T1B1 145 aa1.09□□□□□ -2.23
SNHG1-224ENST00000545688 AKR1C8PQ5T2L2 129 aa1.09□□□□□ -2.23
SNHG1-224ENST00000545688 ALKAL2Q6UX46 152 aa1.09□□□□□ -2.23
SNHG1-224ENST00000545688 KCNRGQ8N5I3 272 aa1.09□□□□□ -2.23
SNHG1-224ENST00000545688 SMIM2Q9BVW6 85 aa1.09□□□□□ -2.23
SNHG1-224ENST00000545688 TOMM7Q9P0U1 55 aa1.09□□□□□ -2.23
SNHG1-224ENST00000545688 DSTQ03001 7570 aaKnown RBP1.09□□□□□ -2.24
SNHG1-224ENST00000545688 BORCS7-ASMTA0A0B4J1R7 106 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 HIGD1CA8MV81 97 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 UMAD1C9J7I0 102 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 H3BQ85 93 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 NPYP01303 97 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 IFI27P40305 119 aaPredicted RBP1.08□□□□□ -2.24
SNHG1-224ENST00000545688 RAB5BP61020 215 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 HERVK_113P63121 156 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 COX17Q14061 63 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 ATP11AUNQ6ZP68 121 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 AKAP14Q86UN6 197 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 COX7B2Q8TF08 81 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 SPRR2FQ96RM1 72 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 MANBALQ9NQG1 85 aa1.08□□□□□ -2.24
SNHG1-224ENST00000545688 TRAV9-1A0A075B6T8 112 aa1.07□□□□□ -2.24
SNHG1-224ENST00000545688 A8MWP4 228 aa1.07□□□□□ -2.24
SNHG1-224ENST00000545688 PDE6DO43924 150 aa1.07□□□□□ -2.24
SNHG1-224ENST00000545688 SPRR2DP22532 72 aa1.07□□□□□ -2.24
SNHG1-224ENST00000545688 RAB14P61106 215 aa1.07□□□□□ -2.24
SNHG1-224ENST00000545688 SEC11AP67812 179 aa1.07□□□□□ -2.24
SNHG1-224ENST00000545688 LINC00299Q6ZSB3 139 aa1.07□□□□□ -2.24
SNHG1-224ENST00000545688 FAM213BQ8TBF2 198 aa1.07□□□□□ -2.24
SNHG1-224ENST00000545688 ZNF625Q96I27 306 aaPredicted RBP1.07□□□□□ -2.24
SNHG1-224ENST00000545688 TRBV20-1A0A075B6N2 111 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 LOC107984156A0A0G2JMH3 177 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 TRBV10-3A0A0K0K1G6 114 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 A0A1B0GV50 99 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 TINCRA0A1B0GVN0 87 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 A0A1B0GXF2 115 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 D6R8Y8 96 aa1.06□□□□□ -2.24
SNHG1-224ENST00000545688 GATCO43716 136 aaKnown RBP1.06□□□□□ -2.24
SNHG1-224ENST00000545688 SSNA1O43805 119 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms