RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 NKAPP1Q8N9T2 125 aa5.73□□□□□ -1.49
TDP1-204ENST00000545686 MRAPQ8TCY5 172 aa5.73□□□□□ -1.49
TDP1-204ENST00000545686 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
TDP1-204ENST00000545686 NOTCH2Q04721 2471 aa5.73□□□□□ -1.49
TDP1-204ENST00000545686 SYCNQ0VAF6 134 aa5.73□□□□□ -1.49
TDP1-204ENST00000545686 DHRS4-AS1Q9P1J3 65 aa5.73□□□□□ -1.49
TDP1-204ENST00000545686 A0A0U1RQV1 116 aa5.72□□□□□ -1.49
TDP1-204ENST00000545686 PRYO14603 147 aa5.72□□□□□ -1.49
TDP1-204ENST00000545686 TLX1NBP0CAT3 122 aa5.72□□□□□ -1.49
TDP1-204ENST00000545686 Q8N377 158 aa5.72□□□□□ -1.49
TDP1-204ENST00000545686 UNC79Q9P2D8 2635 aa5.71□□□□□ -1.49
TDP1-204ENST00000545686 FUSP35637 526 aaKnown RBP eCLIP5.71□□□□□ -1.49
TDP1-204ENST00000545686 FP248Q71RG6 208 aaPredicted RBP5.71□□□□□ -1.49
TDP1-204ENST00000545686 C7orf33Q8WU49 177 aa5.71□□□□□ -1.49
TDP1-204ENST00000545686 Q8N9L7 120 aa5.71□□□□□ -1.5
TDP1-204ENST00000545686 IGLV5-37A0A075B6J1 123 aa5.7□□□□□ -1.5
TDP1-204ENST00000545686 C3orf84H3BNL1 204 aa5.7□□□□□ -1.5
TDP1-204ENST00000545686 ESRGQ1W209 222 aa5.7□□□□□ -1.5
TDP1-204ENST00000545686 Q6ZRX8 168 aa5.7□□□□□ -1.5
TDP1-204ENST00000545686 IGKV2D-24A0A075B6R9 120 aa5.7□□□□□ -1.5
TDP1-204ENST00000545686 Q6ZTC4 211 aa5.7□□□□□ -1.5
TDP1-204ENST00000545686 TENM1Q9UKZ4 2725 aa5.69□□□□□ -1.5
TDP1-204ENST00000545686 J3QKU1 62 aa5.69□□□□□ -1.5
TDP1-204ENST00000545686 TNP2Q05952 138 aa5.69□□□□□ -1.5
TDP1-204ENST00000545686 SERTAD4-AS1Q5TG53 156 aa5.69□□□□□ -1.5
TDP1-204ENST00000545686 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
TDP1-204ENST00000545686 KRTAP4-16G5E9R7 235 aaPredicted RBP5.69□□□□□ -1.5
TDP1-204ENST00000545686 SPRR1AP35321 89 aa5.69□□□□□ -1.5
TDP1-204ENST00000545686 NSD1Q96L73 2696 aaPredicted RBP5.68□□□□□ -1.5
TDP1-204ENST00000545686 LCE6AA0A183 80 aa5.68□□□□□ -1.5
TDP1-204ENST00000545686 INAFM1C9JVW0 142 aa5.68□□□□□ -1.5
TDP1-204ENST00000545686 Q8NBF4 154 aa5.68□□□□□ -1.5
TDP1-204ENST00000545686 DEFB105AQ8NG35 78 aa5.68□□□□□ -1.5
TDP1-204ENST00000545686 KMT2BQ9UMN6 2715 aaPredicted RBP5.68□□□□□ -1.5
TDP1-204ENST00000545686 DNAH10OSP0CZ25 163 aa5.67□□□□□ -1.5
TDP1-204ENST00000545686 SPRR4Q96PI1 79 aa5.67□□□□□ -1.5
TDP1-204ENST00000545686 TEP1Q99973 2627 aaKnown RBP5.67□□□□□ -1.5
TDP1-204ENST00000545686 IGLV1-50A0A075B6I6 118 aa5.67□□□□□ -1.5
TDP1-204ENST00000545686 A0A1W2PNM2 257 aa5.67□□□□□ -1.5
TDP1-204ENST00000545686 LINC00336Q6ZUF6 198 aa5.67□□□□□ -1.5
TDP1-204ENST00000545686 Q9BRP9 147 aa5.67□□□□□ -1.5
TDP1-204ENST00000545686 RETNQ9HD89 108 aa5.67□□□□□ -1.5
TDP1-204ENST00000545686 FASNP49327 2511 aaKnown RBP5.66□□□□□ -1.5
TDP1-204ENST00000545686 ETDCA0A1B0GVM5 59 aa5.66□□□□□ -1.5
TDP1-204ENST00000545686 C1orf137Q5JT78 98 aa5.66□□□□□ -1.5
TDP1-204ENST00000545686 SMIM29Q86T20 159 aa5.65□□□□□ -1.5
TDP1-204ENST00000545686 DEFB131BA0A096LNP1 70 aa5.65□□□□□ -1.51
TDP1-204ENST00000545686 HELZ2Q9BYK8 2649 aaKnown RBP5.64□□□□□ -1.51
TDP1-204ENST00000545686 HIGD2AQ9BW72 106 aa5.64□□□□□ -1.51
TDP1-204ENST00000545686 LINC00474Q9P2X8 69 aa5.64□□□□□ -1.51
TDP1-204ENST00000545686 ATRQ13535 2644 aa5.64□□□□□ -1.51
TDP1-204ENST00000545686 TRRAPQ9Y4A5 3859 aa5.63□□□□□ -1.51
TDP1-204ENST00000545686 RPL37AP8A6NKH3 93 aa5.63□□□□□ -1.51
TDP1-204ENST00000545686 C11orf45Q8TAV5 145 aa5.63□□□□□ -1.51
TDP1-204ENST00000545686 PKD1L1Q8TDX9 2849 aa5.62□□□□□ -1.51
TDP1-204ENST00000545686 DSCR10P59022 87 aa5.62□□□□□ -1.51
TDP1-204ENST00000545686 KRTAP10-11P60412 298 aa5.62□□□□□ -1.51
TDP1-204ENST00000545686 FAM229BQ4G0N7 80 aa5.62□□□□□ -1.51
TDP1-204ENST00000545686 MRPL55Q7Z7F7 128 aaKnown RBP5.62□□□□□ -1.51
TDP1-204ENST00000545686 ST20-AS1Q8NBB2 130 aa5.62□□□□□ -1.51
TDP1-204ENST00000545686 FAM30AQ9NZY2 134 aa5.62□□□□□ -1.51
TDP1-204ENST00000545686 FAM168BA1KXE4 195 aa5.61□□□□□ -1.51
TDP1-204ENST00000545686 ZCCHC13Q8WW36 166 aaKnown RBP5.61□□□□□ -1.51
TDP1-204ENST00000545686 OTOGQ6ZRI0 2925 aa5.61□□□□□ -1.51
TDP1-204ENST00000545686 KRTAP7-1Q8IUC3 87 aa5.6□□□□□ -1.51
TDP1-204ENST00000545686 DNAH1Q9P2D7 4330 aa5.6□□□□□ -1.51
TDP1-204ENST00000545686 UBE2BP63146 152 aa5.59□□□□□ -1.51
TDP1-204ENST00000545686 hDV103S1A0JD37 113 aa5.59□□□□□ -1.51
TDP1-204ENST00000545686 K7EQZ3 153 aa5.59□□□□□ -1.51
TDP1-204ENST00000545686 REG3GQ6UW15 175 aa5.59□□□□□ -1.51
TDP1-204ENST00000545686 HCG22E2RYF7 251 aa5.58□□□□□ -1.52
TDP1-204ENST00000545686 LINC00476Q8WZB0 136 aa5.58□□□□□ -1.52
TDP1-204ENST00000545686 LINC00588Q9Y4M8 146 aa5.57□□□□□ -1.52
TDP1-204ENST00000545686 TENM3Q9P273 2699 aa5.57□□□□□ -1.52
TDP1-204ENST00000545686 DNAH3Q8TD57 4116 aa5.57□□□□□ -1.52
TDP1-204ENST00000545686 CMYA5Q8N3K9 4069 aa5.57□□□□□ -1.52
TDP1-204ENST00000545686 ANK2Q01484 3957 aa5.57□□□□□ -1.52
TDP1-204ENST00000545686 IGLV8-61A0A075B6I0 122 aa5.57□□□□□ -1.52
TDP1-204ENST00000545686 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
TDP1-204ENST00000545686 CYP4F30PQ9H0H9 118 aa5.56□□□□□ -1.52
TDP1-204ENST00000545686 PSCAO43653 123 aa5.56□□□□□ -1.52
TDP1-204ENST00000545686 NDUFB1O75438 58 aa5.56□□□□□ -1.52
TDP1-204ENST00000545686 CASC10Q5T4H9 136 aa5.56□□□□□ -1.52
TDP1-204ENST00000545686 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.55□□□□□ -1.52
TDP1-204ENST00000545686 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
TDP1-204ENST00000545686 IGFL1Q6UW32 110 aa5.55□□□□□ -1.52
TDP1-204ENST00000545686 Q1T7F1 81 aa5.54□□□□□ -1.52
TDP1-204ENST00000545686 C1orf64Q8NEQ6 169 aa5.54□□□□□ -1.52
TDP1-204ENST00000545686 MP68P56378 58 aa5.52□□□□□ -1.53
TDP1-204ENST00000545686 C16orf90A8MZG2 172 aa5.51□□□□□ -1.53
TDP1-204ENST00000545686 HECTD1Q9ULT8 2610 aa5.51□□□□□ -1.53
TDP1-204ENST00000545686 H3BPC8 53 aa5.51□□□□□ -1.53
TDP1-204ENST00000545686 CNBPP62633 177 aaKnown RBP5.51□□□□□ -1.53
TDP1-204ENST00000545686 A0A087WSZ3 146 aa5.5□□□□□ -1.53
TDP1-204ENST00000545686 KRTAP29-1A8MX34 341 aaPredicted RBP5.5□□□□□ -1.53
TDP1-204ENST00000545686 A0A096LNI7 61 aa5.49□□□□□ -1.53
TDP1-204ENST00000545686 TRAV22A0A0B4J277 110 aa5.49□□□□□ -1.53
TDP1-204ENST00000545686 H0Y9J4 135 aa5.49□□□□□ -1.53
TDP1-204ENST00000545686 SPRR1BP22528 89 aa5.49□□□□□ -1.53
TDP1-204ENST00000545686 PRLHP81277 87 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms