RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 ERASQ7Z444 233 aa5.17□□□□□ -1.58
CHD4-212ENST00000545083 URB1-AS1Q96HZ7 61 aa5.17□□□□□ -1.58
CHD4-212ENST00000545083 HIGD2AQ9BW72 106 aa5.17□□□□□ -1.58
CHD4-212ENST00000545083 A6NDN8 102 aa5.16□□□□□ -1.58
CHD4-212ENST00000545083 SPINK1P00995 79 aa5.16□□□□□ -1.58
CHD4-212ENST00000545083 NPSP0C0P6 89 aa5.16□□□□□ -1.58
CHD4-212ENST00000545083 COX8AP10176 69 aa5.16□□□□□ -1.58
CHD4-212ENST00000545083 ATOH7Q8N100 152 aa5.16□□□□□ -1.58
CHD4-212ENST00000545083 PRELID3AQ96N28 172 aa5.16□□□□□ -1.58
CHD4-212ENST00000545083 NXT2Q9NPJ8 142 aaKnown RBP5.16□□□□□ -1.58
CHD4-212ENST00000545083 CYSLTR1Q9Y271 337 aa5.16□□□□□ -1.58
CHD4-212ENST00000545083 LOC389332A0A1B0GUA5 103 aa5.15□□□□□ -1.59
CHD4-212ENST00000545083 IGIPA6NJ69 53 aa5.15□□□□□ -1.59
CHD4-212ENST00000545083 SMIM1B2RUZ4 78 aa5.15□□□□□ -1.59
CHD4-212ENST00000545083 HBDP02042 147 aa5.15□□□□□ -1.59
CHD4-212ENST00000545083 HERVK_113P63121 156 aa5.15□□□□□ -1.59
CHD4-212ENST00000545083 Q8N377 158 aa5.15□□□□□ -1.59
CHD4-212ENST00000545083 Q8NDZ9 215 aa5.15□□□□□ -1.59
CHD4-212ENST00000545083 MAP1LC3AQ9H492 121 aa5.15□□□□□ -1.59
CHD4-212ENST00000545083 IGLV8-61A0A075B6I0 122 aa5.14□□□□□ -1.59
CHD4-212ENST00000545083 LINC01546A6NGU7 62 aa5.14□□□□□ -1.59
CHD4-212ENST00000545083 VAMP3Q15836 100 aa5.14□□□□□ -1.59
CHD4-212ENST00000545083 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
CHD4-212ENST00000545083 BVES-AS1Q5T3Y7 98 aa5.14□□□□□ -1.59
CHD4-212ENST00000545083 GTF2H5Q6ZYL4 71 aa5.14□□□□□ -1.59
CHD4-212ENST00000545083 COX7B2Q8TF08 81 aa5.14□□□□□ -1.59
CHD4-212ENST00000545083 FCGBPQ9Y6R7 5405 aaPredicted RBP5.13□□□□□ -1.59
CHD4-212ENST00000545083 LINC01549A6NIU2 74 aa5.13□□□□□ -1.59
CHD4-212ENST00000545083 M0R2T5 61 aa5.13□□□□□ -1.59
CHD4-212ENST00000545083 ATP5LO75964 103 aa5.13□□□□□ -1.59
CHD4-212ENST00000545083 HSD52Q0P140 79 aa5.13□□□□□ -1.59
CHD4-212ENST00000545083 IFI27L1Q96BM0 104 aa5.13□□□□□ -1.59
CHD4-212ENST00000545083 GEMIN7Q9H840 131 aaKnown RBP5.13□□□□□ -1.59
CHD4-212ENST00000545083 NDUFA12Q9UI09 145 aa5.13□□□□□ -1.59
CHD4-212ENST00000545083 K7EMI3 77 aa5.12□□□□□ -1.59
CHD4-212ENST00000545083 K7ERU9 68 aa5.12□□□□□ -1.59
CHD4-212ENST00000545083 H3BRM9 83 aa5.11□□□□□ -1.59
CHD4-212ENST00000545083 TAX1BP3O14907 124 aa5.11□□□□□ -1.59
CHD4-212ENST00000545083 GAGE2AQ6NT46 116 aa5.11□□□□□ -1.59
CHD4-212ENST00000545083 BOD1L2Q8IYS8 172 aa5.11□□□□□ -1.59
CHD4-212ENST00000545083 Q8N8P6 123 aa5.11□□□□□ -1.59
CHD4-212ENST00000545083 HIGD1BQ9P298 99 aa5.11□□□□□ -1.59
CHD4-212ENST00000545083 SPINK8P0C7L1 97 aa5.1□□□□□ -1.59
CHD4-212ENST00000545083 PFN2P35080 140 aa5.1□□□□□ -1.59
CHD4-212ENST00000545083 RPS29P62273 56 aaKnown RBP5.1□□□□□ -1.59
CHD4-212ENST00000545083 SND1-IT1Q9HBX3 110 aa5.1□□□□□ -1.59
CHD4-212ENST00000545083 ZNF706Q9Y5V0 76 aaPredicted RBP5.1□□□□□ -1.59
CHD4-212ENST00000545083 IGLV5-45A0A087WSX0 123 aa5.09□□□□□ -1.59
CHD4-212ENST00000545083 SLC25A20O43772 301 aa5.09□□□□□ -1.59
CHD4-212ENST00000545083 TAL2Q16559 108 aa5.09□□□□□ -1.59
CHD4-212ENST00000545083 A0A096LNJ9 63 aa5.08□□□□□ -1.6
CHD4-212ENST00000545083 DPM2O94777 84 aa5.08□□□□□ -1.6
CHD4-212ENST00000545083 IGKCP01834 107 aa5.08□□□□□ -1.6
CHD4-212ENST00000545083 PLNP26678 52 aa5.08□□□□□ -1.6
CHD4-212ENST00000545083 MOBPQ13875 183 aa5.08□□□□□ -1.6
CHD4-212ENST00000545083 ORMDL2Q53FV1 153 aa5.08□□□□□ -1.6
CHD4-212ENST00000545083 LINC00483Q53H64 154 aa5.08□□□□□ -1.6
CHD4-212ENST00000545083 C2orf91Q6ZV80 131 aa5.08□□□□□ -1.6
CHD4-212ENST00000545083 TIMM17AQ99595 171 aa5.08□□□□□ -1.6
CHD4-212ENST00000545083 TINCRA0A1B0GVN0 87 aa5.07□□□□□ -1.6
CHD4-212ENST00000545083 SMIM13P0DJ93 91 aa5.07□□□□□ -1.6
CHD4-212ENST00000545083 HERV-K104P63124 156 aa5.07□□□□□ -1.6
CHD4-212ENST00000545083 RPL24P83731 157 aaKnown RBP5.07□□□□□ -1.6
CHD4-212ENST00000545083 PAPPA-AS1Q5QFB9 102 aa5.07□□□□□ -1.6
CHD4-212ENST00000545083 SMCR5Q8TEV8 140 aa5.07□□□□□ -1.6
CHD4-212ENST00000545083 CST9LQ9H4G1 147 aa5.07□□□□□ -1.6
CHD4-212ENST00000545083 IGLV9-49A0A0B4J1Y8 123 aa5.06□□□□□ -1.6
CHD4-212ENST00000545083 TRAV12-1A0A0B4J245 112 aa5.06□□□□□ -1.6
CHD4-212ENST00000545083 FABP2P12104 132 aa5.06□□□□□ -1.6
CHD4-212ENST00000545083 K7EP34 96 aa5.05□□□□□ -1.6
CHD4-212ENST00000545083 NMUP48645 174 aa5.05□□□□□ -1.6
CHD4-212ENST00000545083 OCIAD2Q56VL3 154 aa5.05□□□□□ -1.6
CHD4-212ENST00000545083 SSBP3-AS1Q7Z2R9 100 aa5.05□□□□□ -1.6
CHD4-212ENST00000545083 TOMM6Q96B49 74 aa5.05□□□□□ -1.6
CHD4-212ENST00000545083 VPS25Q9BRG1 176 aa5.05□□□□□ -1.6
CHD4-212ENST00000545083 ERG28Q9UKR5 140 aa5.05□□□□□ -1.6
CHD4-212ENST00000545083 C9orf92A6NGG3 77 aa5.04□□□□□ -1.6
CHD4-212ENST00000545083 KRTAP4-16G5E9R7 235 aaPredicted RBP5.04□□□□□ -1.6
CHD4-212ENST00000545083 J3QR89 54 aa5.04□□□□□ -1.6
CHD4-212ENST00000545083 SEC61GP60059 68 aa5.04□□□□□ -1.6
CHD4-212ENST00000545083 ZNF625Q96I27 306 aaPredicted RBP5.04□□□□□ -1.6
CHD4-212ENST00000545083 IGLV5-39A0A0G2JS06 123 aa5.03□□□□□ -1.6
CHD4-212ENST00000545083 A0A1W2PPM0 123 aa5.03□□□□□ -1.6
CHD4-212ENST00000545083 ERC2-IT1O76042 136 aa5.03□□□□□ -1.6
CHD4-212ENST00000545083 SPRR1AP35321 89 aa5.03□□□□□ -1.6
CHD4-212ENST00000545083 LYRM7Q5U5X0 104 aa5.03□□□□□ -1.6
CHD4-212ENST00000545083 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
CHD4-212ENST00000545083 SCGB3A1Q96QR1 104 aa5.03□□□□□ -1.6
CHD4-212ENST00000545083 SYNE2Q8WXH0 6885 aaKnown RBP5.02□□□□□ -1.61
CHD4-212ENST00000545083 H3BUT2 72 aa5.02□□□□□ -1.61
CHD4-212ENST00000545083 HERVK_113P61574 105 aa5.02□□□□□ -1.61
CHD4-212ENST00000545083 CEND1Q8N111 149 aa5.02□□□□□ -1.61
CHD4-212ENST00000545083 SPCS1Q9Y6A9 102 aa5.02□□□□□ -1.61
CHD4-212ENST00000545083 COX17Q14061 63 aa5.01□□□□□ -1.61
CHD4-212ENST00000545083 Q6ZVH6 145 aa5.01□□□□□ -1.61
CHD4-212ENST00000545083 F8W1H4 67 aa5□□□□□ -1.61
CHD4-212ENST00000545083 PCP2Q8IVA1 136 aa5□□□□□ -1.61
CHD4-212ENST00000545083 HIST1H4GQ99525 98 aa5□□□□□ -1.61
CHD4-212ENST00000545083 KCNQ1DNQ9H478 68 aa5□□□□□ -1.61
CHD4-212ENST00000545083 MYMXA0A1B0GTQ4 84 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms